EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000009941 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 4534 bases
Position: chrJH425814.1:89276-93809
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	1	7
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	2	7
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	3	7
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	4	7
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	5	7
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	6	7
ENSHBUP00000008434	zf-C2H2	PF00096.26	3.5e-30	7	7
ENSHBUP00000008434	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000001944	-	1116	-	ENSHBUP00000008434	371 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000009941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000009941	-	60	44.706	ENSHBUG00000011944	-	57	44.706
ENSHBUG00000009941	-	82	40.909	ENSHBUG00000007764	snai2	80	40.909
ENSHBUG00000009941	-	81	51.370	ENSHBUG00000007188	-	69	51.370
ENSHBUG00000009941	-	99	42.188	ENSHBUG00000023375	prdm5	95	41.969
ENSHBUG00000009941	-	60	44.118	ENSHBUG00000013467	-	63	44.118
ENSHBUG00000009941	-	99	58.235	ENSHBUG00000017372	-	95	58.235
ENSHBUG00000009941	-	81	48.454	ENSHBUG00000007068	-	77	48.454
ENSHBUG00000009941	-	57	42.697	ENSHBUG00000004077	-	95	45.370
ENSHBUG00000009941	-	64	57.931	ENSHBUG00000015942	-	95	60.331
ENSHBUG00000009941	-	59	45.128	ENSHBUG00000016927	-	59	45.128
ENSHBUG00000009941	-	72	54.497	ENSHBUG00000013194	-	76	54.497
ENSHBUG00000009941	-	100	40.719	ENSHBUG00000003165	-	86	42.056
ENSHBUG00000009941	-	59	34.247	ENSHBUG00000018885	-	57	38.017
ENSHBUG00000009941	-	60	46.154	ENSHBUG00000013542	-	56	46.154
ENSHBUG00000009941	-	58	47.143	ENSHBUG00000023209	-	86	47.143
ENSHBUG00000009941	-	83	49.107	ENSHBUG00000006662	-	57	48.921
ENSHBUG00000009941	-	60	47.887	ENSHBUG00000013065	-	53	47.887
ENSHBUG00000009941	-	68	40.741	ENSHBUG00000002961	-	99	40.741
ENSHBUG00000009941	-	86	43.333	ENSHBUG00000012007	-	94	40.816
ENSHBUG00000009941	-	76	42.781	ENSHBUG00000002881	-	59	42.781
ENSHBUG00000009941	-	63	49.758	ENSHBUG00000005809	-	98	48.731
ENSHBUG00000009941	-	63	39.910	ENSHBUG00000016334	-	52	39.910
ENSHBUG00000009941	-	81	58.416	ENSHBUG00000022021	-	52	58.416
ENSHBUG00000009941	-	60	38.624	ENSHBUG00000014494	-	58	38.624
ENSHBUG00000009941	-	65	40.361	ENSHBUG00000009815	znf319b	79	40.361
ENSHBUG00000009941	-	60	43.478	ENSHBUG00000013264	-	74	43.478
ENSHBUG00000009941	-	97	40.493	ENSHBUG00000021970	-	96	48.958
ENSHBUG00000009941	-	69	42.000	ENSHBUG00000019090	ZNF319	87	42.771
ENSHBUG00000009941	-	82	46.914	ENSHBUG00000009837	znf236	57	55.556
ENSHBUG00000009941	-	81	58.706	ENSHBUG00000015803	-	93	58.706
ENSHBUG00000009941	-	81	43.667	ENSHBUG00000020071	-	71	43.667
ENSHBUG00000009941	-	81	48.341	ENSHBUG00000012230	-	84	48.341
ENSHBUG00000009941	-	60	38.793	ENSHBUG00000015404	-	66	38.793
ENSHBUG00000009941	-	60	40.167	ENSHBUG00000002320	-	61	40.167
ENSHBUG00000009941	-	65	37.563	ENSHBUG00000018577	PRDM15	51	33.498
ENSHBUG00000009941	-	59	36.975	ENSHBUG00000012492	scrt2	53	36.975
ENSHBUG00000009941	-	56	54.945	ENSHBUG00000017864	-	79	54.945
ENSHBUG00000009941	-	58	46.429	ENSHBUG00000005451	gfi1b	51	46.429
ENSHBUG00000009941	-	74	42.056	ENSHBUG00000007316	-	67	43.719
ENSHBUG00000009941	-	58	47.879	ENSHBUG00000019800	-	92	47.879
ENSHBUG00000009941	-	60	45.545	ENSHBUG00000022073	-	66	39.000
ENSHBUG00000009941	-	65	42.995	ENSHBUG00000015719	-	96	42.995
ENSHBUG00000009941	-	78	52.222	ENSHBUG00000021906	-	100	52.222
ENSHBUG00000009941	-	59	49.351	ENSHBUG00000003529	-	83	49.351
ENSHBUG00000009941	-	74	43.119	ENSHBUG00000002541	-	94	43.119
ENSHBUG00000009941	-	83	53.846	ENSHBUG00000017843	-	74	53.846
ENSHBUG00000009941	-	82	44.509	ENSHBUG00000009319	znf384l	54	44.509
ENSHBUG00000009941	-	71	42.347	ENSHBUG00000005848	-	87	46.199
ENSHBUG00000009941	-	75	37.719	ENSHBUG00000016621	scrt1b	72	37.719
ENSHBUG00000009941	-	99	43.675	ENSHBUG00000018916	-	91	43.675
ENSHBUG00000009941	-	63	44.805	ENSHBUG00000006238	-	99	44.805
ENSHBUG00000009941	-	67	47.468	ENSHBUG00000003057	-	95	49.718
ENSHBUG00000009941	-	92	46.429	ENSHBUG00000002526	-	80	46.429
ENSHBUG00000009941	-	76	33.740	ENSHBUG00000009720	-	73	33.740
ENSHBUG00000009941	-	63	40.828	ENSHBUG00000000731	-	51	40.828
ENSHBUG00000009941	-	65	46.193	ENSHBUG00000000820	-	94	46.193
ENSHBUG00000009941	-	60	45.455	ENSHBUG00000015393	-	75	44.390
ENSHBUG00000009941	-	99	48.765	ENSHBUG00000021028	-	99	48.765
ENSHBUG00000009941	-	70	49.057	ENSHBUG00000002307	-	79	49.057
ENSHBUG00000009941	-	61	33.772	ENSHBUG00000005895	-	51	33.191
ENSHBUG00000009941	-	60	40.586	ENSHBUG00000013296	-	95	40.586
ENSHBUG00000009941	-	74	35.826	ENSHBUG00000013292	-	76	43.439
ENSHBUG00000009941	-	77	51.887	ENSHBUG00000004718	-	92	52.113
ENSHBUG00000009941	-	63	42.857	ENSHBUG00000016546	-	58	44.928
ENSHBUG00000009941	-	99	48.264	ENSHBUG00000017869	-	100	48.264
ENSHBUG00000009941	-	65	43.946	ENSHBUG00000006863	-	90	43.946
ENSHBUG00000009941	-	76	44.286	ENSHBUG00000002841	-	90	44.286
ENSHBUG00000009941	-	55	56.395	ENSHBUG00000006984	-	97	56.395
ENSHBUG00000009941	-	73	48.309	ENSHBUG00000006250	-	93	48.309
ENSHBUG00000009941	-	63	37.931	ENSHBUG00000017445	zbtb41	60	37.931
ENSHBUG00000009941	-	60	46.199	ENSHBUG00000020527	-	84	46.199
ENSHBUG00000009941	-	75	48.416	ENSHBUG00000002889	-	64	48.416
ENSHBUG00000009941	-	60	49.462	ENSHBUG00000017251	-	98	49.462
ENSHBUG00000009941	-	60	45.638	ENSHBUG00000022063	-	64	45.638
ENSHBUG00000009941	-	60	35.865	ENSHBUG00000006656	-	61	38.914
ENSHBUG00000009941	-	60	45.614	ENSHBUG00000009274	-	85	45.614
ENSHBUG00000009941	-	81	48.309	ENSHBUG00000012984	-	93	48.309
ENSHBUG00000009941	-	75	50.000	ENSHBUG00000015226	-	57	50.000
ENSHBUG00000009941	-	78	44.805	ENSHBUG00000000146	-	100	44.805
ENSHBUG00000009941	-	60	57.955	ENSHBUG00000021003	-	91	57.955
ENSHBUG00000009941	-	80	53.390	ENSHBUG00000011194	-	94	53.390
ENSHBUG00000009941	-	65	41.589	ENSHBUG00000016384	-	83	41.589
ENSHBUG00000009941	-	65	44.144	ENSHBUG00000014725	-	88	44.144
ENSHBUG00000009941	-	60	44.554	ENSHBUG00000013490	-	73	44.554
ENSHBUG00000009941	-	81	46.179	ENSHBUG00000011725	-	74	46.179
ENSHBUG00000009941	-	60	45.128	ENSHBUG00000004217	-	61	45.128
ENSHBUG00000009941	-	77	52.284	ENSHBUG00000012215	-	93	52.284
ENSHBUG00000009941	-	94	49.239	ENSHBUG00000002533	-	76	49.239
ENSHBUG00000009941	-	73	42.727	ENSHBUG00000002530	-	64	42.727
ENSHBUG00000009941	-	81	50.239	ENSHBUG00000001075	-	96	48.718
ENSHBUG00000009941	-	60	55.446	ENSHBUG00000000099	-	83	55.446
ENSHBUG00000009941	-	80	49.660	ENSHBUG00000017924	-	66	49.660
ENSHBUG00000009941	-	81	51.397	ENSHBUG00000012758	-	99	51.397
ENSHBUG00000009941	-	68	40.359	ENSHBUG00000003449	-	91	40.359
ENSHBUG00000009941	-	82	45.390	ENSHBUG00000016733	ZNF384	61	45.390
ENSHBUG00000009941	-	76	43.750	ENSHBUG00000013518	-	95	43.750
ENSHBUG00000009941	-	65	50.575	ENSHBUG00000020544	-	89	50.575
ENSHBUG00000009941	-	79	53.448	ENSHBUG00000006977	-	67	53.448
ENSHBUG00000009941	-	69	52.381	ENSHBUG00000012565	-	95	52.381
ENSHBUG00000009941	-	78	44.186	ENSHBUG00000002393	-	66	44.186
ENSHBUG00000009941	-	53	40.000	ENSHBUG00000005726	-	55	40.000
ENSHBUG00000009941	-	60	46.243	ENSHBUG00000019377	-	61	46.243
ENSHBUG00000009941	-	80	37.302	ENSHBUG00000012432	-	83	37.302
ENSHBUG00000009941	-	60	39.336	ENSHBUG00000008502	-	82	39.336
ENSHBUG00000009941	-	99	47.934	ENSHBUG00000015166	-	96	47.934
ENSHBUG00000009941	-	53	46.429	ENSHBUG00000002878	-	52	46.429
ENSHBUG00000009941	-	81	45.536	ENSHBUG00000009953	-	85	43.452
ENSHBUG00000009941	-	75	40.698	ENSHBUG00000004840	znf646	72	40.698

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009941	-	54	61.404	ENSCVAG00000023371	-	52	61.404	Cyprinodon_variegatus
ENSHBUG00000009941	-	63	45.701	ENSEBUG00000011730	-	53	45.701	Eptatretus_burgeri
ENSHBUG00000009941	-	61	47.423	ENSEBUG00000014042	-	51	47.423	Eptatretus_burgeri
ENSHBUG00000009941	-	59	50.000	ENSEBUG00000010204	-	69	50.000	Eptatretus_burgeri
ENSHBUG00000009941	-	53	47.159	ENSEBUG00000012314	-	89	47.159	Eptatretus_burgeri
ENSHBUG00000009941	-	81	53.939	ENSGAFG00000014563	-	68	53.939	Gambusia_affinis
ENSHBUG00000009941	-	56	51.327	ENSKMAG00000019180	-	56	51.327	Kryptolebias_marmoratus
ENSHBUG00000009941	-	60	51.724	ENSLOCG00000018285	-	100	56.250	Lepisosteus_oculatus
ENSHBUG00000009941	-	57	52.500	ENSMMOG00000011435	-	87	52.500	Mola_mola
ENSHBUG00000009941	-	78	52.874	ENSORLG00000028457	-	98	52.874	Oryzias_latipes
ENSHBUG00000009941	-	71	49.390	ENSORLG00020006820	-	64	49.390	Oryzias_latipes_hni
ENSHBUG00000009941	-	54	52.941	ENSPMEG00000022852	-	50	52.941	Poecilia_mexicana
ENSHBUG00000009941	-	81	52.542	ENSPREG00000016593	-	58	52.542	Poecilia_reticulata
ENSHBUG00000009941	-	84	59.302	ENSPREG00000004746	-	65	59.302	Poecilia_reticulata
ENSHBUG00000009941	-	62	99.567	ENSPNYG00000011973	-	89	99.567	Pundamilia_nyererei
ENSHBUG00000009941	-	53	65.079	ENSPNYG00000006306	-	92	65.079	Pundamilia_nyererei
ENSHBUG00000009941	-	67	46.907	ENSPNAG00000015513	si:dkey-210j14.3	92	46.907	Pygocentrus_nattereri
ENSHBUG00000009941	-	60	49.138	ENSXCOG00000010950	si:dkey-210j14.3	72	49.138	Xiphophorus_couchianus
ENSHBUG00000009941	-	60	63.218	ENSXMAG00000022137	-	89	63.218	Xiphophorus_maculatus