EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000009947 (Gene tree)
Gene ID: 102308060
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5348 bases
Position: chrJH425907.1:243431-248778
Accession: 102308060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000008439	MMR_HSR1	PF01926.23	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000001940	-	2122	XM_005948105	ENSHBUP00000008439	218 (aa)	XP_005948167	UPI00022B0D84

Gene Model

Click here to download ENSHBUG00000009947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000009947	-	77	44.970	ENSHBUG00000003539	RAB39B	79	44.970
ENSHBUG00000009947	-	77	52.695	ENSHBUG00000022562	-	78	52.695
ENSHBUG00000009947	-	74	34.132	ENSHBUG00000011397	si:cabz01085950.1	82	34.132
ENSHBUG00000009947	-	96	40.476	ENSHBUG00000000993	rab30	90	40.476
ENSHBUG00000009947	-	76	37.647	ENSHBUG00000022669	rab9a	84	37.647
ENSHBUG00000009947	-	74	33.537	ENSHBUG00000017973	si:ch73-116o1.2	82	35.227
ENSHBUG00000009947	-	77	42.604	ENSHBUG00000001462	RAB17	74	42.604
ENSHBUG00000009947	-	79	45.977	ENSHBUG00000013570	-	82	45.977
ENSHBUG00000009947	-	72	37.580	ENSHBUG00000014338	RAB41	74	37.580
ENSHBUG00000009947	-	78	38.043	ENSHBUG00000013162	rab33ba	88	38.043
ENSHBUG00000009947	-	100	97.706	ENSHBUG00000014777	rab11bb	100	97.706
ENSHBUG00000009947	-	74	45.679	ENSHBUG00000001518	rab18a	79	45.679
ENSHBUG00000009947	-	80	44.828	ENSHBUG00000019261	si:dkey-16l2.16	98	41.148
ENSHBUG00000009947	-	100	62.844	ENSHBUG00000009320	rab25b	100	62.844
ENSHBUG00000009947	-	54	30.579	ENSHBUG00000005802	arl4d	59	30.579
ENSHBUG00000009947	-	72	48.408	ENSHBUG00000003752	rab5aa	73	48.408
ENSHBUG00000009947	-	79	40.449	ENSHBUG00000001595	rab9b	79	40.449
ENSHBUG00000009947	-	76	49.398	ENSHBUG00000001416	rab35b	94	44.560
ENSHBUG00000009947	-	89	32.500	ENSHBUG00000012905	rab6ba	92	32.500
ENSHBUG00000009947	-	66	36.111	ENSHBUG00000007966	rab23	79	35.583
ENSHBUG00000009947	-	77	51.190	ENSHBUG00000002397	-	79	51.190
ENSHBUG00000009947	-	70	36.184	ENSHBUG00000003230	rab6bb	76	36.184
ENSHBUG00000009947	-	80	38.857	ENSHBUG00000017620	-	81	38.857
ENSHBUG00000009947	-	89	44.560	ENSHBUG00000003728	-	92	44.560
ENSHBUG00000009947	-	76	33.918	ENSHBUG00000014023	si:dkey-13a21.4	82	33.918
ENSHBUG00000009947	-	62	30.282	ENSHBUG00000007873	-	69	30.282
ENSHBUG00000009947	-	83	41.530	ENSHBUG00000015126	rab42a	69	41.530
ENSHBUG00000009947	-	72	39.877	ENSHBUG00000010852	RAB7A	78	39.877
ENSHBUG00000009947	-	72	39.877	ENSHBUG00000009014	-	78	39.877
ENSHBUG00000009947	-	74	43.478	ENSHBUG00000003434	rab22a	66	43.478
ENSHBUG00000009947	-	77	52.096	ENSHBUG00000006056	-	78	52.096
ENSHBUG00000009947	-	80	40.331	ENSHBUG00000007827	zgc:101559	77	40.331
ENSHBUG00000009947	-	73	32.500	ENSHBUG00000007788	rheb	86	32.500
ENSHBUG00000009947	-	94	85.854	ENSHBUG00000023035	rab11a	88	85.854
ENSHBUG00000009947	-	75	43.636	ENSHBUG00000008497	rab12	84	38.679
ENSHBUG00000009947	-	77	36.905	ENSHBUG00000010964	rabl2	73	36.905
ENSHBUG00000009947	-	77	52.381	ENSHBUG00000010304	rab1ab	83	52.381
ENSHBUG00000009947	-	65	30.612	ENSHBUG00000002201	arl8ba	51	30.612
ENSHBUG00000009947	-	68	35.333	ENSHBUG00000011998	hrasb	85	36.420
ENSHBUG00000009947	-	78	37.059	ENSHBUG00000018763	rras	84	37.059
ENSHBUG00000009947	-	94	41.176	ENSHBUG00000002014	rab5c	89	41.176
ENSHBUG00000009947	-	95	33.645	ENSHBUG00000013010	rab32b	94	33.645
ENSHBUG00000009947	-	70	34.839	ENSHBUG00000013197	kras	87	35.928
ENSHBUG00000009947	-	99	65.297	ENSHBUG00000003876	rab25a	100	65.297
ENSHBUG00000009947	-	78	46.199	ENSHBUG00000003696	rab18b	83	46.199
ENSHBUG00000009947	-	78	54.386	ENSHBUG00000019164	rab2a	81	54.386
ENSHBUG00000009947	-	67	42.763	ENSHBUG00000001714	-	63	42.763
ENSHBUG00000009947	-	94	32.407	ENSHBUG00000016064	rab34a	77	32.407
ENSHBUG00000009947	-	99	82.488	ENSHBUG00000009333	rab11al	99	82.488
ENSHBUG00000009947	-	77	39.884	ENSHBUG00000009027	-	82	39.884
ENSHBUG00000009947	-	76	43.373	ENSHBUG00000017297	rab15	78	43.373
ENSHBUG00000009947	-	72	36.943	ENSHBUG00000000890	rab6a	75	36.943
ENSHBUG00000009947	-	75	47.239	ENSHBUG00000006823	-	73	47.239
ENSHBUG00000009947	-	95	30.415	ENSHBUG00000012594	RAB29	99	30.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009947	-	100	97.706	ENSAPOG00000023455	rab11bb	100	97.706	Acanthochromis_polyacanthus
ENSHBUG00000009947	-	100	85.780	ENSACIG00000019631	rab11bb	100	85.780	Amphilophus_citrinellus
ENSHBUG00000009947	-	100	100.000	ENSACIG00000024376	-	100	100.000	Amphilophus_citrinellus
ENSHBUG00000009947	-	100	100.000	ENSAOCG00000018849	-	100	100.000	Amphiprion_ocellaris
ENSHBUG00000009947	-	100	97.706	ENSAOCG00000018239	rab11bb	100	97.706	Amphiprion_ocellaris
ENSHBUG00000009947	-	100	97.706	ENSAPEG00000016590	rab11bb	100	97.706	Amphiprion_percula
ENSHBUG00000009947	-	100	99.541	ENSATEG00000023725	-	100	99.541	Anabas_testudineus
ENSHBUG00000009947	-	100	97.706	ENSATEG00000017696	rab11bb	100	97.706	Anabas_testudineus
ENSHBUG00000009947	-	94	98.544	ENSAPLG00000011046	-	94	98.544	Anas_platyrhynchos
ENSHBUG00000009947	-	100	100.000	ENSACLG00000005446	-	100	100.000	Astatotilapia_calliptera
ENSHBUG00000009947	-	100	97.706	ENSACLG00000007076	rab11bb	100	97.706	Astatotilapia_calliptera
ENSHBUG00000009947	-	100	99.083	ENSAMXG00000042655	rab11bb	100	99.083	Astyanax_mexicanus
ENSHBUG00000009947	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSHBUG00000009947	-	100	96.789	ENSBTAG00000002475	RAB11B	100	96.789	Bos_taurus
ENSHBUG00000009947	-	96	95.215	ENSCHIG00000022426	-	93	95.215	Capra_hircus
ENSHBUG00000009947	-	100	96.789	ENSCATG00000029188	-	100	96.789	Cercocebus_atys
ENSHBUG00000009947	-	100	97.706	ENSCPBG00000017056	-	100	97.706	Chrysemys_picta_bellii
ENSHBUG00000009947	-	100	97.706	ENSCSEG00000012149	rab11bb	100	97.706	Cynoglossus_semilaevis
ENSHBUG00000009947	-	100	99.541	ENSCSEG00000007239	-	100	99.541	Cynoglossus_semilaevis
ENSHBUG00000009947	-	100	99.083	ENSCVAG00000019718	-	100	99.083	Cyprinodon_variegatus
ENSHBUG00000009947	-	100	95.872	ENSCVAG00000019751	-	100	95.872	Cyprinodon_variegatus
ENSHBUG00000009947	-	100	97.706	ENSCVAG00000017021	-	100	97.706	Cyprinodon_variegatus
ENSHBUG00000009947	-	100	97.706	ENSDARG00000090086	rab11bb	100	97.706	Danio_rerio
ENSHBUG00000009947	-	99	94.470	ENSETEG00000000905	-	99	94.470	Echinops_telfairi
ENSHBUG00000009947	-	99	94.419	ENSEASG00005003708	-	99	94.419	Equus_asinus_asinus
ENSHBUG00000009947	-	99	94.419	ENSECAG00000000716	RAB11B	99	94.419	Equus_caballus
ENSHBUG00000009947	-	100	98.624	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSHBUG00000009947	-	100	97.706	ENSELUG00000000916	-	100	97.706	Esox_lucius
ENSHBUG00000009947	-	100	97.706	ENSELUG00000021148	rab11bb	100	97.706	Esox_lucius
ENSHBUG00000009947	-	100	97.706	ENSFALG00000011828	-	100	97.706	Ficedula_albicollis
ENSHBUG00000009947	-	100	99.541	ENSFHEG00000022676	-	100	99.541	Fundulus_heteroclitus
ENSHBUG00000009947	-	100	97.706	ENSFHEG00000018353	rab11bb	100	97.706	Fundulus_heteroclitus
ENSHBUG00000009947	-	99	95.370	ENSGMOG00000009668	-	99	95.370	Gadus_morhua
ENSHBUG00000009947	-	100	97.706	ENSGMOG00000009211	rab11bb	100	97.706	Gadus_morhua
ENSHBUG00000009947	-	100	97.706	ENSGALG00000000613	RAB11B	100	97.706	Gallus_gallus
ENSHBUG00000009947	-	100	97.706	ENSGAFG00000007102	rab11bb	100	97.706	Gambusia_affinis
ENSHBUG00000009947	-	100	97.248	ENSGACG00000015479	rab11bb	100	97.248	Gasterosteus_aculeatus
ENSHBUG00000009947	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSHBUG00000009947	-	100	96.789	ENSGGOG00000014516	RAB11B	100	96.789	Gorilla_gorilla
ENSHBUG00000009947	-	100	96.789	ENSHCOG00000000954	-	100	96.789	Hippocampus_comes
ENSHBUG00000009947	-	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSHBUG00000009947	-	100	98.165	ENSHCOG00000002423	rab11bb	100	98.165	Hippocampus_comes
ENSHBUG00000009947	-	100	96.789	ENSIPUG00000025100	rab11b	100	96.789	Ictalurus_punctatus
ENSHBUG00000009947	-	100	98.624	ENSIPUG00000019927	rab11bb	100	98.624	Ictalurus_punctatus
ENSHBUG00000009947	-	100	97.706	ENSKMAG00000009033	rab11bb	100	97.706	Kryptolebias_marmoratus
ENSHBUG00000009947	-	100	100.000	ENSKMAG00000006170	-	100	100.000	Kryptolebias_marmoratus
ENSHBUG00000009947	-	100	99.083	ENSLBEG00000004172	-	100	99.083	Labrus_bergylta
ENSHBUG00000009947	-	100	91.743	ENSLBEG00000005981	-	100	91.743	Labrus_bergylta
ENSHBUG00000009947	-	100	97.706	ENSLBEG00000015248	rab11bb	100	97.706	Labrus_bergylta
ENSHBUG00000009947	-	100	97.706	ENSLACG00000016857	-	100	97.706	Latimeria_chalumnae
ENSHBUG00000009947	-	100	96.789	ENSMFAG00000003654	RAB11B	100	96.789	Macaca_fascicularis
ENSHBUG00000009947	-	100	96.789	ENSMLEG00000030601	-	100	96.789	Mandrillus_leucophaeus
ENSHBUG00000009947	-	100	97.248	ENSMAMG00000006378	rab11bb	100	97.248	Mastacembelus_armatus
ENSHBUG00000009947	-	100	98.624	ENSMAMG00000018533	-	100	98.624	Mastacembelus_armatus
ENSHBUG00000009947	-	100	100.000	ENSMZEG00005010975	-	100	100.000	Maylandia_zebra
ENSHBUG00000009947	-	100	97.706	ENSMZEG00005003352	rab11bb	100	97.706	Maylandia_zebra
ENSHBUG00000009947	-	100	96.789	ENSMICG00000034065	-	100	96.789	Microcebus_murinus
ENSHBUG00000009947	-	94	97.561	ENSMMOG00000007917	rab11bb	100	97.561	Mola_mola
ENSHBUG00000009947	-	100	100.000	ENSMMOG00000001250	-	100	100.000	Mola_mola
ENSHBUG00000009947	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSHBUG00000009947	-	100	97.706	ENSMODG00000003841	-	100	97.706	Monodelphis_domestica
ENSHBUG00000009947	-	100	97.706	ENSMALG00000022187	rab11bb	100	97.706	Monopterus_albus
ENSHBUG00000009947	-	94	88.889	ENSMLUG00000006677	-	100	88.889	Myotis_lucifugus
ENSHBUG00000009947	-	100	97.706	ENSNBRG00000000372	rab11bb	100	97.706	Neolamprologus_brichardi
ENSHBUG00000009947	-	100	100.000	ENSNBRG00000023885	-	100	100.000	Neolamprologus_brichardi
ENSHBUG00000009947	-	100	97.706	ENSMEUG00000003686	-	100	97.706	Notamacropus_eugenii
ENSHBUG00000009947	-	100	100.000	ENSONIG00000002544	-	100	100.000	Oreochromis_niloticus
ENSHBUG00000009947	-	100	97.706	ENSONIG00000010435	rab11bb	100	97.706	Oreochromis_niloticus
ENSHBUG00000009947	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSHBUG00000009947	-	99	98.157	ENSORLG00000015284	-	72	98.157	Oryzias_latipes
ENSHBUG00000009947	-	100	97.248	ENSORLG00000013938	rab11bb	100	97.248	Oryzias_latipes
ENSHBUG00000009947	-	100	97.248	ENSORLG00020019393	rab11bb	100	97.248	Oryzias_latipes_hni
ENSHBUG00000009947	-	99	98.157	ENSORLG00020020844	RAB11B	99	98.157	Oryzias_latipes_hni
ENSHBUG00000009947	-	99	98.157	ENSORLG00015016999	RAB11B	99	98.157	Oryzias_latipes_hsok
ENSHBUG00000009947	-	100	97.248	ENSORLG00015020173	rab11bb	100	97.248	Oryzias_latipes_hsok
ENSHBUG00000009947	-	100	99.083	ENSOMEG00000002562	-	100	99.083	Oryzias_melastigma
ENSHBUG00000009947	-	100	97.706	ENSOMEG00000017806	-	100	97.706	Oryzias_melastigma
ENSHBUG00000009947	-	100	96.789	ENSPPAG00000028589	-	100	96.789	Pan_paniscus
ENSHBUG00000009947	-	100	96.789	ENSPTRG00000010422	RAB11B	100	96.789	Pan_troglodytes
ENSHBUG00000009947	-	100	96.789	ENSPANG00000007765	-	100	96.789	Papio_anubis
ENSHBUG00000009947	-	100	97.248	ENSPKIG00000011703	-	100	97.248	Paramormyrops_kingsleyae
ENSHBUG00000009947	-	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSHBUG00000009947	-	100	97.706	ENSPKIG00000011640	rab11bb	100	97.706	Paramormyrops_kingsleyae
ENSHBUG00000009947	-	98	93.607	ENSPSIG00000010242	-	85	93.607	Pelodiscus_sinensis
ENSHBUG00000009947	-	100	97.706	ENSPMGG00000009435	rab11bb	100	97.706	Periophthalmus_magnuspinnatus
ENSHBUG00000009947	-	99	94.470	ENSPMGG00000014336	-	99	94.470	Periophthalmus_magnuspinnatus
ENSHBUG00000009947	-	100	98.165	ENSPMGG00000014333	-	100	98.165	Periophthalmus_magnuspinnatus
ENSHBUG00000009947	-	97	97.170	ENSPCIG00000020371	-	99	97.170	Phascolarctos_cinereus
ENSHBUG00000009947	-	100	97.706	ENSPFOG00000024114	-	100	97.706	Poecilia_formosa
ENSHBUG00000009947	-	100	100.000	ENSPFOG00000006224	-	100	100.000	Poecilia_formosa
ENSHBUG00000009947	-	100	100.000	ENSPLAG00000014207	-	100	100.000	Poecilia_latipinna
ENSHBUG00000009947	-	100	97.706	ENSPLAG00000001598	rab11bb	100	97.706	Poecilia_latipinna
ENSHBUG00000009947	-	100	97.706	ENSPMEG00000012389	rab11bb	100	97.706	Poecilia_mexicana
ENSHBUG00000009947	-	100	100.000	ENSPMEG00000007842	-	100	100.000	Poecilia_mexicana
ENSHBUG00000009947	-	100	97.706	ENSPREG00000014269	rab11bb	100	97.706	Poecilia_reticulata
ENSHBUG00000009947	-	100	99.541	ENSPREG00000006336	-	100	99.541	Poecilia_reticulata
ENSHBUG00000009947	-	100	100.000	ENSPNYG00000019611	-	100	100.000	Pundamilia_nyererei
ENSHBUG00000009947	-	100	97.706	ENSPNYG00000004098	rab11bb	100	97.706	Pundamilia_nyererei
ENSHBUG00000009947	-	100	96.789	ENSRROG00000037812	-	100	96.789	Rhinopithecus_roxellana
ENSHBUG00000009947	-	97	96.698	ENSSHAG00000006816	-	97	96.698	Sarcophilus_harrisii
ENSHBUG00000009947	-	100	73.853	ENSSFOG00015006245	-	100	73.853	Scleropages_formosus
ENSHBUG00000009947	-	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSHBUG00000009947	-	100	96.330	ENSSMAG00000018613	-	100	96.330	Scophthalmus_maximus
ENSHBUG00000009947	-	100	97.248	ENSSMAG00000004922	rab11bb	100	97.248	Scophthalmus_maximus
ENSHBUG00000009947	-	100	100.000	ENSSDUG00000002934	-	100	100.000	Seriola_dumerili
ENSHBUG00000009947	-	100	97.706	ENSSDUG00000013558	rab11bb	100	97.706	Seriola_dumerili
ENSHBUG00000009947	-	100	100.000	ENSSLDG00000005275	-	100	100.000	Seriola_lalandi_dorsalis
ENSHBUG00000009947	-	100	97.706	ENSSLDG00000020676	rab11bb	100	97.706	Seriola_lalandi_dorsalis
ENSHBUG00000009947	-	100	97.706	ENSSPUG00000002243	-	100	97.706	Sphenodon_punctatus
ENSHBUG00000009947	-	100	100.000	ENSSPAG00000014559	-	100	100.000	Stegastes_partitus
ENSHBUG00000009947	-	100	97.706	ENSSPAG00000011419	rab11bb	100	97.706	Stegastes_partitus
ENSHBUG00000009947	-	100	97.706	ENSTGUG00000000084	-	100	97.706	Taeniopygia_guttata
ENSHBUG00000009947	-	100	97.706	ENSTRUG00000022029	rab11bb	100	97.706	Takifugu_rubripes
ENSHBUG00000009947	-	99	95.853	ENSTRUG00000021614	-	99	95.853	Takifugu_rubripes
ENSHBUG00000009947	-	99	99.537	ENSTRUG00000021619	-	100	99.537	Takifugu_rubripes
ENSHBUG00000009947	-	93	97.044	ENSTNIG00000002003	-	100	97.044	Tetraodon_nigroviridis
ENSHBUG00000009947	-	99	99.537	ENSTNIG00000013182	-	100	99.537	Tetraodon_nigroviridis
ENSHBUG00000009947	-	99	95.392	ENSTNIG00000013184	-	99	95.392	Tetraodon_nigroviridis
ENSHBUG00000009947	-	100	96.789	ENSTNIG00000011081	rab11bb	100	96.789	Tetraodon_nigroviridis
ENSHBUG00000009947	-	94	97.561	ENSUAMG00000006639	-	99	97.561	Ursus_americanus
ENSHBUG00000009947	-	100	96.804	ENSXETG00000025484	rab11b.1	99	96.804	Xenopus_tropicalis
ENSHBUG00000009947	-	100	100.000	ENSXCOG00000009190	-	100	100.000	Xiphophorus_couchianus
ENSHBUG00000009947	-	100	97.706	ENSXCOG00000008042	-	100	97.706	Xiphophorus_couchianus
ENSHBUG00000009947	-	100	99.541	ENSXMAG00000024840	-	100	99.541	Xiphophorus_maculatus
ENSHBUG00000009947	-	100	97.706	ENSXMAG00000011926	rab11bb	100	97.706	Xiphophorus_maculatus