EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000009953 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3260 bases
Position: chrJH425814.1:74144-77403
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000008448	zf-C2H2	PF00096.26	9.3e-33	1	5
ENSHBUP00000008448	zf-C2H2	PF00096.26	9.3e-33	2	5
ENSHBUP00000008448	zf-C2H2	PF00096.26	9.3e-33	3	5
ENSHBUP00000008448	zf-C2H2	PF00096.26	9.3e-33	4	5
ENSHBUP00000008448	zf-C2H2	PF00096.26	9.3e-33	5	5
ENSHBUP00000008448	zf-met	PF12874.7	0.00021	1	2
ENSHBUP00000008448	zf-met	PF12874.7	0.00021	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000001923	-	1218	-	ENSHBUP00000008448	405 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000009953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000009953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000009953	-	71	42.396	ENSHBUG00000000820	-	92	42.396
ENSHBUG00000009953	-	87	42.060	ENSHBUG00000013467	-	75	42.060
ENSHBUG00000009953	-	56	51.562	ENSHBUG00000003529	-	86	51.562
ENSHBUG00000009953	-	60	37.436	ENSHBUG00000019090	ZNF319	87	37.436
ENSHBUG00000009953	-	58	34.375	ENSHBUG00000023375	prdm5	91	34.634
ENSHBUG00000009953	-	87	50.000	ENSHBUG00000003165	-	91	50.000
ENSHBUG00000009953	-	60	42.857	ENSHBUG00000014725	-	87	42.857
ENSHBUG00000009953	-	65	43.269	ENSHBUG00000003057	-	91	43.655
ENSHBUG00000009953	-	64	36.885	ENSHBUG00000003449	-	85	36.885
ENSHBUG00000009953	-	67	39.474	ENSHBUG00000002878	-	78	39.474
ENSHBUG00000009953	-	64	41.808	ENSHBUG00000009274	-	83	41.808
ENSHBUG00000009953	-	60	36.546	ENSHBUG00000000731	-	57	36.546
ENSHBUG00000009953	-	64	42.553	ENSHBUG00000006662	-	71	39.496
ENSHBUG00000009953	-	79	50.000	ENSHBUG00000021970	-	91	50.000
ENSHBUG00000009953	-	62	38.750	ENSHBUG00000009815	znf319b	81	37.500
ENSHBUG00000009953	-	66	48.469	ENSHBUG00000012565	-	94	48.469
ENSHBUG00000009953	-	88	46.914	ENSHBUG00000015803	-	99	46.914
ENSHBUG00000009953	-	91	51.351	ENSHBUG00000004718	-	99	51.351
ENSHBUG00000009953	-	88	45.856	ENSHBUG00000001075	-	98	45.856
ENSHBUG00000009953	-	89	40.187	ENSHBUG00000000636	-	76	40.187
ENSHBUG00000009953	-	60	41.361	ENSHBUG00000002320	-	57	41.361
ENSHBUG00000009953	-	61	34.127	ENSHBUG00000012492	scrt2	75	34.058
ENSHBUG00000009953	-	85	46.154	ENSHBUG00000015166	-	97	46.154
ENSHBUG00000009953	-	91	43.443	ENSHBUG00000012215	-	98	49.189
ENSHBUG00000009953	-	87	41.026	ENSHBUG00000013065	-	82	41.026
ENSHBUG00000009953	-	63	42.391	ENSHBUG00000006238	-	94	42.391
ENSHBUG00000009953	-	90	47.745	ENSHBUG00000012984	-	99	47.745
ENSHBUG00000009953	-	87	35.772	ENSHBUG00000017445	zbtb41	64	35.772
ENSHBUG00000009953	-	60	40.278	ENSHBUG00000016927	-	59	40.278
ENSHBUG00000009953	-	91	51.309	ENSHBUG00000007068	-	83	51.309
ENSHBUG00000009953	-	68	42.927	ENSHBUG00000016546	-	51	43.750
ENSHBUG00000009953	-	60	43.415	ENSHBUG00000013296	-	98	43.415
ENSHBUG00000009953	-	92	45.802	ENSHBUG00000013292	-	98	45.802
ENSHBUG00000009953	-	86	47.418	ENSHBUG00000012758	-	100	47.418
ENSHBUG00000009953	-	54	40.816	ENSHBUG00000005726	-	56	40.816
ENSHBUG00000009953	-	58	36.517	ENSHBUG00000014494	-	65	36.517
ENSHBUG00000009953	-	57	44.898	ENSHBUG00000017251	-	100	44.898
ENSHBUG00000009953	-	79	34.722	ENSHBUG00000016621	scrt1b	74	34.722
ENSHBUG00000009953	-	56	44.706	ENSHBUG00000007764	snai2	72	32.948
ENSHBUG00000009953	-	90	44.545	ENSHBUG00000020071	-	77	44.545
ENSHBUG00000009953	-	90	46.512	ENSHBUG00000018916	-	89	46.512
ENSHBUG00000009953	-	85	43.452	ENSHBUG00000009941	-	81	45.536
ENSHBUG00000009953	-	73	38.710	ENSHBUG00000004840	znf646	75	38.710
ENSHBUG00000009953	-	91	46.396	ENSHBUG00000002526	-	90	46.396
ENSHBUG00000009953	-	61	42.574	ENSHBUG00000002841	-	81	42.574
ENSHBUG00000009953	-	65	53.804	ENSHBUG00000015942	-	98	52.846
ENSHBUG00000009953	-	76	39.175	ENSHBUG00000007316	-	79	40.654
ENSHBUG00000009953	-	90	46.316	ENSHBUG00000022021	-	65	41.176
ENSHBUG00000009953	-	61	42.991	ENSHBUG00000009837	znf236	62	42.991
ENSHBUG00000009953	-	55	41.784	ENSHBUG00000015719	-	95	41.784
ENSHBUG00000009953	-	89	48.810	ENSHBUG00000017372	-	92	48.810
ENSHBUG00000009953	-	82	41.243	ENSHBUG00000000146	-	98	40.379
ENSHBUG00000009953	-	98	41.855	ENSHBUG00000012230	-	94	41.855
ENSHBUG00000009953	-	62	41.606	ENSHBUG00000002307	-	71	41.606
ENSHBUG00000009953	-	54	39.873	ENSHBUG00000006656	-	61	39.873
ENSHBUG00000009953	-	86	43.114	ENSHBUG00000017924	-	77	50.847
ENSHBUG00000009953	-	60	32.906	ENSHBUG00000009720	-	62	32.906
ENSHBUG00000009953	-	55	46.715	ENSHBUG00000022063	-	69	46.715
ENSHBUG00000009953	-	93	43.902	ENSHBUG00000007188	-	79	43.491
ENSHBUG00000009953	-	92	46.154	ENSHBUG00000012432	-	92	36.214
ENSHBUG00000009953	-	72	38.278	ENSHBUG00000005848	-	87	38.278
ENSHBUG00000009953	-	90	49.451	ENSHBUG00000013542	-	82	46.405
ENSHBUG00000009953	-	79	47.126	ENSHBUG00000021906	-	100	47.126
ENSHBUG00000009953	-	83	43.956	ENSHBUG00000017843	-	69	43.956
ENSHBUG00000009953	-	50	36.957	ENSHBUG00000001692	si:ch211-236k19.4	68	36.471
ENSHBUG00000009953	-	57	42.405	ENSHBUG00000023209	-	96	42.405
ENSHBUG00000009953	-	64	47.982	ENSHBUG00000006984	-	99	47.982
ENSHBUG00000009953	-	65	48.322	ENSHBUG00000011194	-	75	48.322
ENSHBUG00000009953	-	66	49.640	ENSHBUG00000017864	-	83	49.640
ENSHBUG00000009953	-	71	40.550	ENSHBUG00000017869	-	99	43.972
ENSHBUG00000009953	-	59	40.566	ENSHBUG00000006250	-	84	40.566
ENSHBUG00000009953	-	92	46.341	ENSHBUG00000013490	-	92	46.341
ENSHBUG00000009953	-	77	40.708	ENSHBUG00000005809	-	97	42.601
ENSHBUG00000009953	-	74	40.376	ENSHBUG00000006863	-	88	40.376
ENSHBUG00000009953	-	66	44.103	ENSHBUG00000011944	-	86	44.103
ENSHBUG00000009953	-	55	42.718	ENSHBUG00000004077	-	94	45.745
ENSHBUG00000009953	-	77	42.045	ENSHBUG00000013518	-	94	42.045
ENSHBUG00000009953	-	87	43.564	ENSHBUG00000021028	-	99	37.762
ENSHBUG00000009953	-	85	38.739	ENSHBUG00000012007	-	87	38.739
ENSHBUG00000009953	-	63	37.594	ENSHBUG00000018885	-	60	37.594
ENSHBUG00000009953	-	71	40.097	ENSHBUG00000016384	-	94	40.097
ENSHBUG00000009953	-	58	43.627	ENSHBUG00000019800	-	85	43.627
ENSHBUG00000009953	-	78	46.479	ENSHBUG00000002889	-	62	46.479
ENSHBUG00000009953	-	63	41.553	ENSHBUG00000004217	-	61	41.553
ENSHBUG00000009953	-	88	33.512	ENSHBUG00000002881	-	85	40.566
ENSHBUG00000009953	-	64	45.139	ENSHBUG00000013194	-	88	45.139
ENSHBUG00000009953	-	72	41.212	ENSHBUG00000020527	-	84	41.212
ENSHBUG00000009953	-	62	44.828	ENSHBUG00000008502	-	84	44.828
ENSHBUG00000009953	-	94	43.434	ENSHBUG00000002393	-	53	43.434
ENSHBUG00000009953	-	88	40.541	ENSHBUG00000015226	-	71	37.363
ENSHBUG00000009953	-	88	43.243	ENSHBUG00000011725	-	99	43.243
ENSHBUG00000009953	-	60	39.301	ENSHBUG00000013264	-	86	39.301
ENSHBUG00000009953	-	84	43.689	ENSHBUG00000005451	gfi1b	84	43.689
ENSHBUG00000009953	-	55	41.451	ENSHBUG00000023595	znf652	61	41.451
ENSHBUG00000009953	-	59	38.034	ENSHBUG00000016334	-	58	38.034
ENSHBUG00000009953	-	91	43.429	ENSHBUG00000022073	-	91	43.429
ENSHBUG00000009953	-	51	39.604	ENSHBUG00000013491	snai1a	77	32.407
ENSHBUG00000009953	-	66	45.274	ENSHBUG00000002541	-	76	45.274
ENSHBUG00000009953	-	63	39.286	ENSHBUG00000015404	-	67	39.604
ENSHBUG00000009953	-	56	43.976	ENSHBUG00000011969	gfi1ab	50	43.976
ENSHBUG00000009953	-	75	42.520	ENSHBUG00000002961	-	95	42.520
ENSHBUG00000009953	-	65	48.800	ENSHBUG00000021003	-	95	48.800
ENSHBUG00000009953	-	55	52.381	ENSHBUG00000020544	-	84	52.381
ENSHBUG00000009953	-	53	47.945	ENSHBUG00000019101	-	53	47.945
ENSHBUG00000009953	-	87	35.052	ENSHBUG00000002533	-	85	35.052
ENSHBUG00000009953	-	66	40.230	ENSHBUG00000015393	-	75	39.831
ENSHBUG00000009953	-	64	41.629	ENSHBUG00000019377	-	64	41.629
ENSHBUG00000009953	-	89	48.454	ENSHBUG00000000099	-	81	42.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000009953	-	52	39.583	ENSACIG00000008886	znf1164	80	39.583	Amphilophus_citrinellus
ENSHBUG00000009953	-	91	40.892	ENSACIG00000000360	si:ch211-241b2.1	99	40.892	Amphilophus_citrinellus
ENSHBUG00000009953	-	62	42.697	ENSACIG00000007882	-	83	42.697	Amphilophus_citrinellus
ENSHBUG00000009953	-	56	48.864	ENSAOCG00000021565	-	81	48.864	Amphiprion_ocellaris
ENSHBUG00000009953	-	83	40.984	ENSATEG00000008683	si:ch211-241b2.1	90	35.563	Anabas_testudineus
ENSHBUG00000009953	-	88	43.243	ENSATEG00000008667	-	63	43.243	Anabas_testudineus
ENSHBUG00000009953	-	82	39.645	ENSACLG00000024670	-	96	38.162	Astatotilapia_calliptera
ENSHBUG00000009953	-	69	37.576	ENSACLG00000017449	-	63	37.576	Astatotilapia_calliptera
ENSHBUG00000009953	-	53	47.436	ENSACLG00000000521	-	93	47.436	Astatotilapia_calliptera
ENSHBUG00000009953	-	56	49.000	ENSAMXG00000041650	-	85	49.000	Astyanax_mexicanus
ENSHBUG00000009953	-	59	40.529	ENSAMXG00000043291	-	63	42.453	Astyanax_mexicanus
ENSHBUG00000009953	-	66	38.596	ENSCSEG00000015585	-	81	38.596	Cynoglossus_semilaevis
ENSHBUG00000009953	-	66	42.157	ENSDARG00000101694	znf1184	82	42.157	Danio_rerio
ENSHBUG00000009953	-	59	43.590	ENSDARG00000078159	zgc:175284	78	45.455	Danio_rerio
ENSHBUG00000009953	-	90	45.729	ENSDARG00000092605	znf1003	73	45.729	Danio_rerio
ENSHBUG00000009953	-	75	39.068	ENSDARG00000105056	znf45l	99	39.068	Danio_rerio
ENSHBUG00000009953	-	66	46.154	ENSDARG00000053165	zgc:113377	81	46.154	Danio_rerio
ENSHBUG00000009953	-	64	43.243	ENSDARG00000078814	si:dkey-34m19.3	82	43.243	Danio_rerio
ENSHBUG00000009953	-	83	34.862	FBgn0037877	CG6689	60	34.862	Drosophila_melanogaster
ENSHBUG00000009953	-	52	38.235	ENSEBUG00000015073	-	82	38.235	Eptatretus_burgeri
ENSHBUG00000009953	-	89	40.876	ENSELUG00000008131	-	79	40.876	Esox_lucius
ENSHBUG00000009953	-	64	41.718	ENSFHEG00000014023	-	94	36.943	Fundulus_heteroclitus
ENSHBUG00000009953	-	61	45.596	ENSFHEG00000018209	-	72	43.697	Fundulus_heteroclitus
ENSHBUG00000009953	-	92	35.135	ENSFHEG00000013152	-	88	35.135	Fundulus_heteroclitus
ENSHBUG00000009953	-	65	41.441	ENSFHEG00000018009	-	51	42.308	Fundulus_heteroclitus
ENSHBUG00000009953	-	89	45.238	ENSKMAG00000014629	-	92	45.238	Kryptolebias_marmoratus
ENSHBUG00000009953	-	60	39.869	ENSKMAG00000009563	-	73	39.869	Kryptolebias_marmoratus
ENSHBUG00000009953	-	61	36.765	ENSLBEG00000022939	-	66	36.765	Labrus_bergylta
ENSHBUG00000009953	-	88	50.000	ENSLBEG00000020461	-	96	41.573	Labrus_bergylta
ENSHBUG00000009953	-	89	46.316	ENSMAMG00000014743	-	72	46.316	Mastacembelus_armatus
ENSHBUG00000009953	-	87	43.750	ENSMZEG00005027943	-	99	42.500	Maylandia_zebra
ENSHBUG00000009953	-	88	46.154	ENSMZEG00005027793	-	98	46.154	Maylandia_zebra
ENSHBUG00000009953	-	58	40.991	ENSMZEG00005021426	-	75	40.991	Maylandia_zebra
ENSHBUG00000009953	-	91	46.512	ENSMZEG00005007426	-	97	46.512	Maylandia_zebra
ENSHBUG00000009953	-	91	46.721	ENSMZEG00005026470	-	83	46.721	Maylandia_zebra
ENSHBUG00000009953	-	89	46.465	ENSMZEG00005025729	-	95	46.465	Maylandia_zebra
ENSHBUG00000009953	-	70	35.319	ENSMZEG00005022161	-	90	37.857	Maylandia_zebra
ENSHBUG00000009953	-	60	37.037	ENSMZEG00005025568	-	80	37.037	Maylandia_zebra
ENSHBUG00000009953	-	88	42.718	ENSMALG00000018074	-	90	42.718	Monopterus_albus
ENSHBUG00000009953	-	93	37.037	ENSMALG00000008638	-	87	37.037	Monopterus_albus
ENSHBUG00000009953	-	91	43.386	ENSNBRG00000000577	-	90	41.484	Neolamprologus_brichardi
ENSHBUG00000009953	-	57	39.623	ENSONIG00000013908	-	100	39.623	Oreochromis_niloticus
ENSHBUG00000009953	-	60	36.530	ENSONIG00000006585	-	99	36.530	Oreochromis_niloticus
ENSHBUG00000009953	-	71	40.698	ENSONIG00000003363	-	99	40.698	Oreochromis_niloticus
ENSHBUG00000009953	-	64	39.735	ENSORLG00020019341	-	84	55.556	Oryzias_latipes_hni
ENSHBUG00000009953	-	84	48.696	ENSPKIG00000019848	-	58	48.696	Paramormyrops_kingsleyae
ENSHBUG00000009953	-	60	41.935	ENSPKIG00000020324	-	56	42.029	Paramormyrops_kingsleyae
ENSHBUG00000009953	-	58	41.791	ENSPMGG00000001558	znf1174	57	41.791	Periophthalmus_magnuspinnatus
ENSHBUG00000009953	-	58	45.902	ENSPFOG00000001144	-	100	40.909	Poecilia_formosa
ENSHBUG00000009953	-	62	40.476	ENSPFOG00000011766	-	100	40.476	Poecilia_formosa
ENSHBUG00000009953	-	88	38.400	ENSPLAG00000016561	zgc:113348	96	43.151	Poecilia_latipinna
ENSHBUG00000009953	-	75	41.176	ENSPMEG00000007573	zgc:113343	67	41.176	Poecilia_mexicana
ENSHBUG00000009953	-	62	31.761	ENSPREG00000005538	-	77	36.269	Poecilia_reticulata
ENSHBUG00000009953	-	55	38.194	ENSPREG00000014105	-	90	44.737	Poecilia_reticulata
ENSHBUG00000009953	-	61	40.724	ENSPREG00000001514	zgc:113343	68	40.724	Poecilia_reticulata
ENSHBUG00000009953	-	57	37.368	ENSPNYG00000024183	zgc:173577	99	37.368	Pundamilia_nyererei
ENSHBUG00000009953	-	89	51.765	ENSSDUG00000008682	-	98	51.765	Seriola_dumerili
ENSHBUG00000009953	-	53	38.725	ENSSPAG00000006539	-	90	38.725	Stegastes_partitus
ENSHBUG00000009953	-	56	42.396	ENSSPAG00000013109	si:ch211-241b2.1	90	42.396	Stegastes_partitus
ENSHBUG00000009953	-	52	49.315	ENSSPAG00000009426	-	63	49.315	Stegastes_partitus
ENSHBUG00000009953	-	57	48.544	ENSTNIG00000000277	-	95	48.544	Tetraodon_nigroviridis
ENSHBUG00000009953	-	63	41.379	ENSXCOG00000017871	zgc:113343	66	41.379	Xiphophorus_couchianus
ENSHBUG00000009953	-	59	41.379	ENSXMAG00000019923	zgc:113343	61	41.379	Xiphophorus_maculatus