EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010040 (Gene tree)
Gene ID: 102308898
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 57449 bases
Position: chrJH425978.1:30490-87938
Accession: 102308898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000008515	RRM_1	PF00076.22	1.2e-12	1	1
ENSHBUP00000027043	RRM_1	PF00076.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000001821	-	2268	-	ENSHBUP00000027043	307 (aa)	-	-
ENSHBUT00000001809	-	2511	XM_005948979	ENSHBUP00000008515	292 (aa)	XP_005949041	UPI000393FCB7

Gene Model

Click here to download ENSHBUG00000010040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010040	-	100	72.635	ENSHBUG00000015412	-	100	72.635
ENSHBUG00000010040	-	74	54.505	ENSHBUG00000018342	-	95	46.926
ENSHBUG00000010040	-	76	56.502	ENSHBUG00000021321	raly	66	57.014
ENSHBUG00000010040	-	80	53.306	ENSHBUG00000010527	-	84	49.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010040	-	100	95.890	ENSAPOG00000008744	-	100	95.890	Acanthochromis_polyacanthus
ENSHBUG00000010040	-	97	86.598	ENSACIG00000007143	-	97	86.598	Amphilophus_citrinellus
ENSHBUG00000010040	-	100	73.986	ENSAOCG00000001605	-	100	73.986	Amphiprion_ocellaris
ENSHBUG00000010040	-	100	98.288	ENSAOCG00000023599	-	100	98.288	Amphiprion_ocellaris
ENSHBUG00000010040	-	97	86.780	ENSATEG00000022219	-	93	91.186	Anabas_testudineus
ENSHBUG00000010040	-	82	74.895	ENSATEG00000023356	-	91	74.895	Anabas_testudineus
ENSHBUG00000010040	-	100	72.635	ENSACLG00000006949	-	100	72.635	Astatotilapia_calliptera
ENSHBUG00000010040	-	100	99.658	ENSACLG00000011720	-	100	99.658	Astatotilapia_calliptera
ENSHBUG00000010040	-	100	64.094	ENSAMXG00000032617	-	100	64.765	Astyanax_mexicanus
ENSHBUG00000010040	-	100	72.973	ENSAMXG00000019031	-	100	72.973	Astyanax_mexicanus
ENSHBUG00000010040	-	100	82.192	ENSCSEG00000014237	-	100	82.192	Cynoglossus_semilaevis
ENSHBUG00000010040	-	100	94.863	ENSCVAG00000013624	-	100	94.863	Cyprinodon_variegatus
ENSHBUG00000010040	-	100	73.649	ENSCVAG00000018104	-	100	73.986	Cyprinodon_variegatus
ENSHBUG00000010040	-	63	72.131	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSHBUG00000010040	-	93	63.273	ENSELUG00000001702	-	96	63.441	Esox_lucius
ENSHBUG00000010040	-	57	72.121	ENSGMOG00000005914	-	100	72.121	Gadus_morhua
ENSHBUG00000010040	-	61	78.090	ENSGACG00000004991	-	91	81.928	Gasterosteus_aculeatus
ENSHBUG00000010040	-	100	73.311	ENSIPUG00000000507	ralyl	100	74.324	Ictalurus_punctatus
ENSHBUG00000010040	-	100	73.311	ENSKMAG00000018155	-	100	74.324	Kryptolebias_marmoratus
ENSHBUG00000010040	-	100	91.096	ENSKMAG00000022093	-	100	91.781	Kryptolebias_marmoratus
ENSHBUG00000010040	-	100	72.727	ENSLBEG00000011011	-	100	72.973	Labrus_bergylta
ENSHBUG00000010040	-	100	92.466	ENSLBEG00000012873	-	100	92.466	Labrus_bergylta
ENSHBUG00000010040	-	100	70.270	ENSLOCG00000012787	ralyl	99	69.257	Lepisosteus_oculatus
ENSHBUG00000010040	-	99	89.655	ENSMAMG00000001723	-	97	89.655	Mastacembelus_armatus
ENSHBUG00000010040	-	98	70.169	ENSMZEG00005018748	-	99	70.847	Maylandia_zebra
ENSHBUG00000010040	-	100	99.658	ENSMZEG00005024447	-	100	99.658	Maylandia_zebra
ENSHBUG00000010040	-	97	85.473	ENSMMOG00000020441	-	86	87.838	Mola_mola
ENSHBUG00000010040	-	100	95.205	ENSMALG00000019019	-	82	93.092	Monopterus_albus
ENSHBUG00000010040	-	100	72.297	ENSMALG00000012952	-	100	72.297	Monopterus_albus
ENSHBUG00000010040	-	97	88.316	ENSNBRG00000011206	-	97	88.316	Neolamprologus_brichardi
ENSHBUG00000010040	-	98	70.847	ENSNBRG00000011376	-	99	70.847	Neolamprologus_brichardi
ENSHBUG00000010040	-	100	89.041	ENSORLG00000017934	-	100	88.699	Oryzias_latipes
ENSHBUG00000010040	-	100	73.986	ENSORLG00000012719	-	100	73.986	Oryzias_latipes
ENSHBUG00000010040	-	100	73.986	ENSORLG00020004438	-	100	73.986	Oryzias_latipes_hni
ENSHBUG00000010040	-	100	88.014	ENSORLG00020000082	-	100	87.671	Oryzias_latipes_hni
ENSHBUG00000010040	-	100	88.356	ENSORLG00015004280	-	100	88.014	Oryzias_latipes_hsok
ENSHBUG00000010040	-	100	73.986	ENSORLG00015004727	-	100	73.986	Oryzias_latipes_hsok
ENSHBUG00000010040	-	100	73.986	ENSOMEG00000001170	-	100	73.986	Oryzias_melastigma
ENSHBUG00000010040	-	100	88.699	ENSOMEG00000011821	-	100	88.699	Oryzias_melastigma
ENSHBUG00000010040	-	100	73.379	ENSPKIG00000015926	-	100	73.379	Paramormyrops_kingsleyae
ENSHBUG00000010040	-	78	68.240	ENSPMGG00000014481	-	95	70.259	Periophthalmus_magnuspinnatus
ENSHBUG00000010040	-	99	76.351	ENSPMGG00000009532	-	99	74.662	Periophthalmus_magnuspinnatus
ENSHBUG00000010040	-	97	89.796	ENSPFOG00000006120	-	99	89.796	Poecilia_formosa
ENSHBUG00000010040	-	97	73.103	ENSPLAG00000011323	ralyl	100	73.103	Poecilia_latipinna
ENSHBUG00000010040	-	97	85.211	ENSPLAG00000009877	-	76	84.615	Poecilia_latipinna
ENSHBUG00000010040	-	97	73.103	ENSPMEG00000023847	ralyl	100	73.103	Poecilia_mexicana
ENSHBUG00000010040	-	97	85.211	ENSPMEG00000013624	-	80	84.615	Poecilia_mexicana
ENSHBUG00000010040	-	97	71.724	ENSPREG00000001956	ralyl	100	71.724	Poecilia_reticulata
ENSHBUG00000010040	-	97	94.346	ENSPREG00000013805	-	100	88.462	Poecilia_reticulata
ENSHBUG00000010040	-	97	88.316	ENSPNYG00000008772	-	97	88.316	Pundamilia_nyererei
ENSHBUG00000010040	-	98	70.169	ENSPNYG00000003548	-	99	70.847	Pundamilia_nyererei
ENSHBUG00000010040	-	100	67.123	ENSPNAG00000026098	-	100	67.123	Pygocentrus_nattereri
ENSHBUG00000010040	-	100	72.635	ENSPNAG00000000498	-	91	70.684	Pygocentrus_nattereri
ENSHBUG00000010040	-	97	66.434	ENSSFOG00015004575	-	96	66.783	Scleropages_formosus
ENSHBUG00000010040	-	100	75.676	ENSSFOG00015009401	-	100	75.676	Scleropages_formosus
ENSHBUG00000010040	-	97	89.825	ENSSMAG00000015907	-	93	89.825	Scophthalmus_maximus
ENSHBUG00000010040	-	100	71.959	ENSSMAG00000005608	-	100	73.064	Scophthalmus_maximus
ENSHBUG00000010040	-	100	97.603	ENSSDUG00000012473	-	100	97.603	Seriola_dumerili
ENSHBUG00000010040	-	100	73.649	ENSSDUG00000007587	-	100	73.649	Seriola_dumerili
ENSHBUG00000010040	-	100	97.260	ENSSLDG00000011534	-	100	97.260	Seriola_lalandi_dorsalis
ENSHBUG00000010040	-	100	73.064	ENSSLDG00000020603	-	100	72.973	Seriola_lalandi_dorsalis
ENSHBUG00000010040	-	97	81.272	ENSSPAG00000013858	-	96	79.110	Stegastes_partitus
ENSHBUG00000010040	-	97	89.046	ENSTRUG00000003829	-	95	87.279	Takifugu_rubripes
ENSHBUG00000010040	-	97	84.694	ENSTNIG00000005594	-	99	84.694	Tetraodon_nigroviridis
ENSHBUG00000010040	-	100	66.443	ENSXETG00000017729	ralyl	99	66.107	Xenopus_tropicalis
ENSHBUG00000010040	-	97	70.805	ENSXCOG00000015156	-	93	70.805	Xiphophorus_couchianus
ENSHBUG00000010040	-	100	74.324	ENSXMAG00000008396	-	100	74.324	Xiphophorus_maculatus
ENSHBUG00000010040	-	100	94.521	ENSXMAG00000007614	-	100	94.521	Xiphophorus_maculatus