EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000010436 (Gene tree)
Gene ID: 102292916
Gene Symbol: clp1
Alias: fa28a12|wu:fa28a12
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6462 bases
Position: chrJH425325.1:5389827-5396288
Accession: 102292916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027302	Clp1	PF06807.14	1.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000001121	-	3147	XM_005913436	ENSHBUP00000027302	441 (aa)	XP_005913498	UPI0003AF7AC6

Gene Model

Click here to download ENSHBUG00000010436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010436	clp1	99	75.172	ENSG00000172409	CLP1	99	75.638	Homo_sapiens
ENSHBUG00000010436	clp1	100	96.599	ENSAPOG00000008242	clp1	100	96.599	Acanthochromis_polyacanthus
ENSHBUG00000010436	clp1	99	74.943	ENSAMEG00000014551	CLP1	99	74.943	Ailuropoda_melanoleuca
ENSHBUG00000010436	clp1	100	98.186	ENSACIG00000006310	clp1	99	98.186	Amphilophus_citrinellus
ENSHBUG00000010436	clp1	100	97.052	ENSAOCG00000010681	clp1	100	97.052	Amphiprion_ocellaris
ENSHBUG00000010436	clp1	100	97.052	ENSAPEG00000012165	clp1	100	97.052	Amphiprion_percula
ENSHBUG00000010436	clp1	100	96.825	ENSATEG00000012374	clp1	100	96.825	Anabas_testudineus
ENSHBUG00000010436	clp1	98	75.000	ENSACAG00000007139	CLP1	99	75.000	Anolis_carolinensis
ENSHBUG00000010436	clp1	99	75.172	ENSANAG00000034935	CLP1	99	75.638	Aotus_nancymaae
ENSHBUG00000010436	clp1	100	99.773	ENSACLG00000013573	clp1	100	99.773	Astatotilapia_calliptera
ENSHBUG00000010436	clp1	95	88.208	ENSAMXG00000014194	clp1	98	88.208	Astyanax_mexicanus
ENSHBUG00000010436	clp1	98	75.174	ENSBTAG00000006493	CLP1	99	75.174	Bos_taurus
ENSHBUG00000010436	clp1	95	47.045	WBGene00010304	clpf-1	97	47.045	Caenorhabditis_elegans
ENSHBUG00000010436	clp1	99	75.172	ENSCJAG00000008748	CLP1	99	75.638	Callithrix_jacchus
ENSHBUG00000010436	clp1	98	75.174	ENSCAFG00000007815	CLP1	99	75.174	Canis_familiaris
ENSHBUG00000010436	clp1	98	75.174	ENSCAFG00020000903	CLP1	99	75.174	Canis_lupus_dingo
ENSHBUG00000010436	clp1	98	75.406	ENSCHIG00000023497	CLP1	99	75.406	Capra_hircus
ENSHBUG00000010436	clp1	99	75.172	ENSTSYG00000006824	CLP1	99	75.172	Carlito_syrichta
ENSHBUG00000010436	clp1	99	74.713	ENSCAPG00000009703	CLP1	99	74.713	Cavia_aperea
ENSHBUG00000010436	clp1	96	76.415	ENSCPOG00000012554	CLP1	99	76.415	Cavia_porcellus
ENSHBUG00000010436	clp1	99	74.943	ENSCCAG00000031957	CLP1	99	74.943	Cebus_capucinus
ENSHBUG00000010436	clp1	100	74.150	ENSCATG00000044628	CLP1	99	75.638	Cercocebus_atys
ENSHBUG00000010436	clp1	98	75.406	ENSCLAG00000004094	CLP1	99	75.406	Chinchilla_lanigera
ENSHBUG00000010436	clp1	98	75.638	ENSCSAG00000005994	CLP1	99	75.638	Chlorocebus_sabaeus
ENSHBUG00000010436	clp1	98	74.537	ENSCPBG00000016843	CLP1	99	74.537	Chrysemys_picta_bellii
ENSHBUG00000010436	clp1	95	63.007	ENSCING00000003779	-	96	63.007	Ciona_intestinalis
ENSHBUG00000010436	clp1	95	63.158	ENSCSAVG00000003437	-	96	63.158	Ciona_savignyi
ENSHBUG00000010436	clp1	99	75.172	ENSCANG00000034335	CLP1	99	75.638	Colobus_angolensis_palliatus
ENSHBUG00000010436	clp1	98	74.769	ENSCGRG00001002227	CLP1	99	74.769	Cricetulus_griseus_chok1gshd
ENSHBUG00000010436	clp1	98	74.769	ENSCGRG00000004328	CLP1	99	74.769	Cricetulus_griseus_crigri
ENSHBUG00000010436	clp1	100	93.424	ENSCSEG00000008614	clp1	100	93.424	Cynoglossus_semilaevis
ENSHBUG00000010436	clp1	100	94.104	ENSCVAG00000020101	clp1	100	94.104	Cyprinodon_variegatus
ENSHBUG00000010436	clp1	100	83.408	ENSDARG00000063663	clp1	100	83.857	Danio_rerio
ENSHBUG00000010436	clp1	98	75.058	ENSDNOG00000042415	CLP1	90	75.058	Dasypus_novemcinctus
ENSHBUG00000010436	clp1	98	74.942	ENSDORG00000014685	Clp1	99	74.942	Dipodomys_ordii
ENSHBUG00000010436	clp1	95	54.306	FBgn0033842	cbc	97	54.306	Drosophila_melanogaster
ENSHBUG00000010436	clp1	98	75.406	ENSETEG00000003009	CLP1	99	75.406	Echinops_telfairi
ENSHBUG00000010436	clp1	98	64.501	ENSEBUG00000011648	clp1	99	64.501	Eptatretus_burgeri
ENSHBUG00000010436	clp1	98	75.638	ENSEASG00005002093	CLP1	99	75.638	Equus_asinus_asinus
ENSHBUG00000010436	clp1	99	75.402	ENSECAG00000011597	CLP1	99	75.638	Equus_caballus
ENSHBUG00000010436	clp1	96	75.708	ENSEEUG00000012771	CLP1	98	75.708	Erinaceus_europaeus
ENSHBUG00000010436	clp1	100	86.323	ENSELUG00000024048	clp1	100	86.323	Esox_lucius
ENSHBUG00000010436	clp1	99	74.943	ENSFCAG00000006633	CLP1	99	75.174	Felis_catus
ENSHBUG00000010436	clp1	98	75.000	ENSFALG00000011145	CLP1	99	75.000	Ficedula_albicollis
ENSHBUG00000010436	clp1	98	75.406	ENSFDAG00000000234	CLP1	99	75.406	Fukomys_damarensis
ENSHBUG00000010436	clp1	100	94.785	ENSFHEG00000014760	CLP1	100	94.785	Fundulus_heteroclitus
ENSHBUG00000010436	clp1	100	89.569	ENSGMOG00000019340	clp1	100	89.569	Gadus_morhua
ENSHBUG00000010436	clp1	98	74.769	ENSGALG00000007370	CLP1	99	74.769	Gallus_gallus
ENSHBUG00000010436	clp1	100	94.104	ENSGAFG00000003020	clp1	100	94.104	Gambusia_affinis
ENSHBUG00000010436	clp1	100	96.372	ENSGACG00000017832	clp1	100	96.372	Gasterosteus_aculeatus
ENSHBUG00000010436	clp1	98	74.537	ENSGAGG00000013279	CLP1	99	74.537	Gopherus_agassizii
ENSHBUG00000010436	clp1	99	75.172	ENSGGOG00000023006	CLP1	99	75.638	Gorilla_gorilla
ENSHBUG00000010436	clp1	98	75.406	ENSHGLG00000009914	CLP1	99	75.406	Heterocephalus_glaber_female
ENSHBUG00000010436	clp1	98	75.406	ENSHGLG00100006105	CLP1	99	75.406	Heterocephalus_glaber_male
ENSHBUG00000010436	clp1	100	94.785	ENSHCOG00000010072	clp1	100	94.785	Hippocampus_comes
ENSHBUG00000010436	clp1	100	83.519	ENSIPUG00000016238	clp1	99	83.519	Ictalurus_punctatus
ENSHBUG00000010436	clp1	98	75.406	ENSSTOG00000029257	CLP1	99	75.406	Ictidomys_tridecemlineatus
ENSHBUG00000010436	clp1	98	74.942	ENSJJAG00000023691	Clp1	99	74.942	Jaculus_jaculus
ENSHBUG00000010436	clp1	100	94.785	ENSKMAG00000011990	clp1	100	94.785	Kryptolebias_marmoratus
ENSHBUG00000010436	clp1	100	96.372	ENSLBEG00000010201	clp1	100	96.372	Labrus_bergylta
ENSHBUG00000010436	clp1	96	74.764	ENSLACG00000003160	CLP1	98	74.764	Latimeria_chalumnae
ENSHBUG00000010436	clp1	71	85.714	ENSLOCG00000008074	clp1	100	85.714	Lepisosteus_oculatus
ENSHBUG00000010436	clp1	98	75.174	ENSLAFG00000014907	CLP1	99	75.174	Loxodonta_africana
ENSHBUG00000010436	clp1	99	75.172	ENSMFAG00000046074	CLP1	99	75.638	Macaca_fascicularis
ENSHBUG00000010436	clp1	99	75.172	ENSMMUG00000038007	CLP1	99	75.172	Macaca_mulatta
ENSHBUG00000010436	clp1	98	75.638	ENSMNEG00000000259	CLP1	99	75.638	Macaca_nemestrina
ENSHBUG00000010436	clp1	99	75.172	ENSMLEG00000043556	CLP1	99	75.638	Mandrillus_leucophaeus
ENSHBUG00000010436	clp1	100	96.599	ENSMAMG00000002149	clp1	100	96.599	Mastacembelus_armatus
ENSHBUG00000010436	clp1	100	99.773	ENSMZEG00005002850	clp1	100	99.773	Maylandia_zebra
ENSHBUG00000010436	clp1	98	74.769	ENSMGAG00000009643	CLP1	99	74.769	Meleagris_gallopavo
ENSHBUG00000010436	clp1	98	74.769	ENSMAUG00000016261	Clp1	99	74.769	Mesocricetus_auratus
ENSHBUG00000010436	clp1	99	74.487	ENSMICG00000004895	CLP1	99	75.174	Microcebus_murinus
ENSHBUG00000010436	clp1	98	75.000	ENSMOCG00000005498	Clp1	99	75.000	Microtus_ochrogaster
ENSHBUG00000010436	clp1	100	94.558	ENSMMOG00000003229	clp1	100	94.558	Mola_mola
ENSHBUG00000010436	clp1	98	74.769	ENSMODG00000020107	-	99	74.769	Monodelphis_domestica
ENSHBUG00000010436	clp1	98	74.769	ENSMODG00000024148	-	99	74.769	Monodelphis_domestica
ENSHBUG00000010436	clp1	100	96.145	ENSMALG00000014239	clp1	100	96.145	Monopterus_albus
ENSHBUG00000010436	clp1	98	74.769	MGP_CAROLIEiJ_G0023726	Clp1	99	74.769	Mus_caroli
ENSHBUG00000010436	clp1	98	74.769	ENSMUSG00000027079	Clp1	99	74.769	Mus_musculus
ENSHBUG00000010436	clp1	98	74.537	MGP_PahariEiJ_G0025177	Clp1	99	74.537	Mus_pahari
ENSHBUG00000010436	clp1	98	74.769	MGP_SPRETEiJ_G0024646	Clp1	99	74.769	Mus_spretus
ENSHBUG00000010436	clp1	98	75.174	ENSMPUG00000000268	CLP1	99	75.174	Mustela_putorius_furo
ENSHBUG00000010436	clp1	99	75.172	ENSMLUG00000007904	CLP1	99	75.172	Myotis_lucifugus
ENSHBUG00000010436	clp1	98	74.942	ENSNGAG00000006165	Clp1	99	74.942	Nannospalax_galili
ENSHBUG00000010436	clp1	100	99.320	ENSNBRG00000005225	clp1	100	99.320	Neolamprologus_brichardi
ENSHBUG00000010436	clp1	80	70.196	ENSNLEG00000012809	-	99	70.196	Nomascus_leucogenys
ENSHBUG00000010436	clp1	98	74.654	ENSMEUG00000010949	CLP1	100	74.654	Notamacropus_eugenii
ENSHBUG00000010436	clp1	69	77.228	ENSOPRG00000007329	CLP1	100	77.228	Ochotona_princeps
ENSHBUG00000010436	clp1	98	75.406	ENSODEG00000011410	CLP1	99	75.406	Octodon_degus
ENSHBUG00000010436	clp1	100	99.320	ENSONIG00000005089	clp1	100	99.320	Oreochromis_niloticus
ENSHBUG00000010436	clp1	99	74.943	ENSOCUG00000007045	CLP1	99	74.943	Oryctolagus_cuniculus
ENSHBUG00000010436	clp1	100	94.785	ENSORLG00000003647	clp1	100	94.785	Oryzias_latipes
ENSHBUG00000010436	clp1	100	94.558	ENSORLG00020016676	clp1	100	94.558	Oryzias_latipes_hni
ENSHBUG00000010436	clp1	100	94.785	ENSORLG00015019484	clp1	100	94.785	Oryzias_latipes_hsok
ENSHBUG00000010436	clp1	100	94.331	ENSOMEG00000021303	clp1	100	94.331	Oryzias_melastigma
ENSHBUG00000010436	clp1	98	75.174	ENSOGAG00000004508	CLP1	99	75.174	Otolemur_garnettii
ENSHBUG00000010436	clp1	98	74.194	ENSOARG00000010145	CLP1	99	74.194	Ovis_aries
ENSHBUG00000010436	clp1	99	75.172	ENSPPAG00000041519	CLP1	99	75.638	Pan_paniscus
ENSHBUG00000010436	clp1	98	75.174	ENSPPRG00000006135	CLP1	99	75.174	Panthera_pardus
ENSHBUG00000010436	clp1	98	75.174	ENSPTIG00000015866	CLP1	99	75.174	Panthera_tigris_altaica
ENSHBUG00000010436	clp1	98	75.638	ENSPTRG00000047318	CLP1	99	75.638	Pan_troglodytes
ENSHBUG00000010436	clp1	99	75.172	ENSPANG00000017078	CLP1	98	75.172	Papio_anubis
ENSHBUG00000010436	clp1	100	85.169	ENSPKIG00000007697	clp1	100	85.169	Paramormyrops_kingsleyae
ENSHBUG00000010436	clp1	93	71.883	ENSPSIG00000005468	CLP1	99	71.883	Pelodiscus_sinensis
ENSHBUG00000010436	clp1	100	92.744	ENSPMGG00000012171	clp1	100	92.744	Periophthalmus_magnuspinnatus
ENSHBUG00000010436	clp1	98	75.000	ENSPEMG00000011213	-	99	75.000	Peromyscus_maniculatus_bairdii
ENSHBUG00000010436	clp1	95	67.458	ENSPMAG00000006707	clp1	97	67.458	Petromyzon_marinus
ENSHBUG00000010436	clp1	98	75.000	ENSPCIG00000011899	CLP1	99	75.000	Phascolarctos_cinereus
ENSHBUG00000010436	clp1	100	94.558	ENSPFOG00000008169	clp1	100	94.558	Poecilia_formosa
ENSHBUG00000010436	clp1	100	94.558	ENSPLAG00000022388	clp1	100	94.558	Poecilia_latipinna
ENSHBUG00000010436	clp1	100	94.558	ENSPMEG00000021088	clp1	100	94.558	Poecilia_mexicana
ENSHBUG00000010436	clp1	100	94.558	ENSPREG00000017802	clp1	100	94.558	Poecilia_reticulata
ENSHBUG00000010436	clp1	52	74.236	ENSPPYG00000003266	-	100	74.236	Pongo_abelii
ENSHBUG00000010436	clp1	99	74.943	ENSPCOG00000000360	CLP1	99	74.943	Propithecus_coquereli
ENSHBUG00000010436	clp1	98	75.174	ENSPVAG00000016270	CLP1	99	75.174	Pteropus_vampyrus
ENSHBUG00000010436	clp1	100	100.000	ENSPNYG00000017274	clp1	99	100.000	Pundamilia_nyererei
ENSHBUG00000010436	clp1	100	85.045	ENSPNAG00000026460	clp1	100	85.714	Pygocentrus_nattereri
ENSHBUG00000010436	clp1	98	74.769	ENSRNOG00000007416	Clp1	99	74.769	Rattus_norvegicus
ENSHBUG00000010436	clp1	98	75.638	ENSRBIG00000018191	CLP1	99	75.638	Rhinopithecus_bieti
ENSHBUG00000010436	clp1	99	75.172	ENSRROG00000039265	CLP1	99	75.638	Rhinopithecus_roxellana
ENSHBUG00000010436	clp1	94	62.077	ENSSBOG00000010558	-	93	62.077	Saimiri_boliviensis_boliviensis
ENSHBUG00000010436	clp1	98	75.638	ENSSBOG00000032517	-	99	75.638	Saimiri_boliviensis_boliviensis
ENSHBUG00000010436	clp1	98	75.000	ENSSHAG00000015695	CLP1	99	75.000	Sarcophilus_harrisii
ENSHBUG00000010436	clp1	100	84.106	ENSSFOG00015000628	clp1	100	84.989	Scleropages_formosus
ENSHBUG00000010436	clp1	100	96.599	ENSSMAG00000019423	clp1	99	96.599	Scophthalmus_maximus
ENSHBUG00000010436	clp1	100	97.279	ENSSDUG00000014495	clp1	100	97.279	Seriola_dumerili
ENSHBUG00000010436	clp1	100	97.052	ENSSLDG00000000937	clp1	100	97.052	Seriola_lalandi_dorsalis
ENSHBUG00000010436	clp1	52	74.123	ENSSARG00000002459	CLP1	100	74.123	Sorex_araneus
ENSHBUG00000010436	clp1	98	74.306	ENSSPUG00000016811	CLP1	99	74.306	Sphenodon_punctatus
ENSHBUG00000010436	clp1	100	96.825	ENSSPAG00000016052	clp1	100	96.825	Stegastes_partitus
ENSHBUG00000010436	clp1	98	75.174	ENSSSCG00000031442	CLP1	99	75.174	Sus_scrofa
ENSHBUG00000010436	clp1	98	74.537	ENSTGUG00000007002	CLP1	99	74.537	Taeniopygia_guttata
ENSHBUG00000010436	clp1	100	92.517	ENSTRUG00000012602	clp1	100	92.517	Takifugu_rubripes
ENSHBUG00000010436	clp1	100	91.837	ENSTNIG00000013125	clp1	100	91.837	Tetraodon_nigroviridis
ENSHBUG00000010436	clp1	98	74.710	ENSTBEG00000009975	CLP1	99	74.710	Tupaia_belangeri
ENSHBUG00000010436	clp1	98	75.174	ENSTTRG00000002096	CLP1	99	75.174	Tursiops_truncatus
ENSHBUG00000010436	clp1	98	75.174	ENSUAMG00000011388	CLP1	99	75.174	Ursus_americanus
ENSHBUG00000010436	clp1	98	75.174	ENSUMAG00000018317	CLP1	99	75.174	Ursus_maritimus
ENSHBUG00000010436	clp1	100	74.150	ENSVVUG00000017138	CLP1	99	74.150	Vulpes_vulpes
ENSHBUG00000010436	clp1	100	69.977	ENSXETG00000007088	clp1	100	70.203	Xenopus_tropicalis
ENSHBUG00000010436	clp1	100	94.331	ENSXCOG00000002287	clp1	100	94.331	Xiphophorus_couchianus
ENSHBUG00000010436	clp1	100	94.331	ENSXMAG00000009783	clp1	100	94.331	Xiphophorus_maculatus