EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000010505 (Gene tree)
Gene ID: 102304063
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 58897 bases
Position: chrJH425421.1:1560802-1619698
Accession: 102304063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000008998	SRRM_C	PF15230.6	4.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000989	-	2513	XM_005928888	ENSHBUP00000008998	612 (aa)	XP_005928950	UPI00032A26A9

Gene Model

Click here to download ENSHBUG00000010505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010505's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010505	srrm4	100	84.824	ENSAPOG00000010969	srrm4	100	84.345	Acanthochromis_polyacanthus
ENSHBUG00000010505	srrm4	68	88.235	ENSACIG00000002171	srrm4	90	88.235	Amphilophus_citrinellus
ENSHBUG00000010505	srrm4	100	83.758	ENSAOCG00000019891	srrm4	100	81.210	Amphiprion_ocellaris
ENSHBUG00000010505	srrm4	100	82.911	ENSAPEG00000011132	srrm4	100	80.380	Amphiprion_percula
ENSHBUG00000010505	srrm4	63	92.683	ENSATEG00000005330	srrm4	92	90.698	Anabas_testudineus
ENSHBUG00000010505	srrm4	65	62.195	ENSCSEG00000007689	-	87	66.667	Cynoglossus_semilaevis
ENSHBUG00000010505	srrm4	57	47.500	ENSDARG00000086327	srrm4	59	47.175	Danio_rerio
ENSHBUG00000010505	srrm4	67	73.438	ENSELUG00000004986	srrm4	84	53.901	Esox_lucius
ENSHBUG00000010505	srrm4	77	53.593	ENSGMOG00000006714	srrm4	84	49.652	Gadus_morhua
ENSHBUG00000010505	srrm4	62	91.667	ENSGAFG00000006706	srrm4	80	91.667	Gambusia_affinis
ENSHBUG00000010505	srrm4	97	69.508	ENSKMAG00000001873	srrm4	99	67.799	Kryptolebias_marmoratus
ENSHBUG00000010505	srrm4	100	76.911	ENSLBEG00000008471	srrm4	100	78.185	Labrus_bergylta
ENSHBUG00000010505	srrm4	89	78.815	ENSMALG00000001422	srrm4	96	79.304	Monopterus_albus
ENSHBUG00000010505	srrm4	70	84.438	ENSNBRG00000015313	srrm4	84	82.421	Neolamprologus_brichardi
ENSHBUG00000010505	srrm4	99	97.592	ENSONIG00000010552	srrm4	99	97.592	Oreochromis_niloticus
ENSHBUG00000010505	srrm4	100	65.391	ENSOMEG00000012376	srrm4	100	64.148	Oryzias_melastigma
ENSHBUG00000010505	srrm4	73	62.445	ENSPFOG00000014600	srrm4	99	63.966	Poecilia_formosa
ENSHBUG00000010505	srrm4	66	94.872	ENSPLAG00000002006	srrm4	91	73.585	Poecilia_latipinna
ENSHBUG00000010505	srrm4	70	87.896	ENSPNYG00000007785	srrm4	81	100.000	Pundamilia_nyererei
ENSHBUG00000010505	srrm4	57	45.013	ENSPNAG00000010426	srrm4	95	46.599	Pygocentrus_nattereri
ENSHBUG00000010505	srrm4	59	48.806	ENSSFOG00015019902	srrm4	88	47.527	Scleropages_formosus
ENSHBUG00000010505	srrm4	63	94.737	ENSSDUG00000017519	srrm4	99	65.546	Seriola_dumerili
ENSHBUG00000010505	srrm4	80	74.640	ENSSPAG00000016190	srrm4	98	79.941	Stegastes_partitus
ENSHBUG00000010505	srrm4	99	70.662	ENSXMAG00000002658	srrm4	99	71.767	Xiphophorus_maculatus