EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010527 (Gene tree)
Gene ID: 102306398
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 11908 bases
Position: chrJH425387.1:89720-101627
Accession: 102306398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000009019	RRM_1	PF00076.22	2.5e-13	1	1
ENSHBUP00000009025	RRM_1	PF00076.22	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000960	-	2136	XM_005924533	ENSHBUP00000009019	319 (aa)	XP_005924595	UPI0003BC94A5
ENSHBUT00000000950	-	2169	XM_014334286	ENSHBUP00000009025	330 (aa)	XP_014189772	-

Gene Model

Click here to download ENSHBUG00000010527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010527	-	94	68.168	ENSHBUG00000018342	-	99	67.456
ENSHBUG00000010527	-	84	49.650	ENSHBUG00000010040	-	80	53.306
ENSHBUG00000010527	-	69	57.576	ENSHBUG00000015412	-	76	55.022
ENSHBUG00000010527	-	84	42.379	ENSHBUG00000021321	raly	70	47.788

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010527	-	87	47.000	ENSG00000184672	RALYL	92	79.487	Homo_sapiens
ENSHBUG00000010527	-	79	85.490	ENSAPOG00000006963	hnrnpc	85	80.075	Acanthochromis_polyacanthus
ENSHBUG00000010527	-	81	82.375	ENSACIG00000000270	-	99	75.241	Amphilophus_citrinellus
ENSHBUG00000010527	-	97	96.117	ENSACIG00000016568	-	100	96.117	Amphilophus_citrinellus
ENSHBUG00000010527	-	100	89.506	ENSAOCG00000021616	-	100	89.198	Amphiprion_ocellaris
ENSHBUG00000010527	-	79	85.882	ENSAOCG00000003896	-	85	80.451	Amphiprion_ocellaris
ENSHBUG00000010527	-	79	85.882	ENSAPEG00000001489	-	85	80.451	Amphiprion_percula
ENSHBUG00000010527	-	84	92.884	ENSAPEG00000019962	-	85	92.509	Amphiprion_percula
ENSHBUG00000010527	-	81	82.308	ENSATEG00000011734	-	99	75.806	Anabas_testudineus
ENSHBUG00000010527	-	84	92.193	ENSATEG00000018006	-	100	88.037	Anabas_testudineus
ENSHBUG00000010527	-	70	52.766	ENSAPLG00000015574	RALYL	80	54.043	Anas_platyrhynchos
ENSHBUG00000010527	-	85	48.110	ENSACAG00000028464	RALYL	79	54.468	Anolis_carolinensis
ENSHBUG00000010527	-	87	47.458	ENSANAG00000023383	RALYL	78	55.752	Aotus_nancymaae
ENSHBUG00000010527	-	90	99.329	ENSACLG00000005707	-	96	99.329	Astatotilapia_calliptera
ENSHBUG00000010527	-	79	81.961	ENSACLG00000013636	-	87	79.323	Astatotilapia_calliptera
ENSHBUG00000010527	-	79	82.353	ENSACLG00000000995	-	82	83.929	Astatotilapia_calliptera
ENSHBUG00000010527	-	83	78.195	ENSAMXG00000034915	zgc:55733	91	75.188	Astyanax_mexicanus
ENSHBUG00000010527	-	66	77.358	ENSAMXG00000042946	hnrnpc	97	75.130	Astyanax_mexicanus
ENSHBUG00000010527	-	87	47.458	ENSCJAG00000000402	RALYL	78	55.752	Callithrix_jacchus
ENSHBUG00000010527	-	85	48.621	ENSCPOG00000012314	RALYL	79	54.274	Cavia_porcellus
ENSHBUG00000010527	-	87	47.458	ENSCCAG00000025003	RALYL	76	79.487	Cebus_capucinus
ENSHBUG00000010527	-	87	47.000	ENSCATG00000042145	RALYL	78	55.752	Cercocebus_atys
ENSHBUG00000010527	-	85	48.621	ENSCLAG00000005228	RALYL	79	54.274	Chinchilla_lanigera
ENSHBUG00000010527	-	68	54.825	ENSCHOG00000013228	RALYL	75	53.097	Choloepus_hoffmanni
ENSHBUG00000010527	-	87	47.000	ENSCANG00000039144	RALYL	78	55.752	Colobus_angolensis_palliatus
ENSHBUG00000010527	-	85	48.797	ENSCGRG00001009241	Ralyl	79	53.617	Cricetulus_griseus_chok1gshd
ENSHBUG00000010527	-	79	87.352	ENSCSEG00000021349	-	82	83.895	Cynoglossus_semilaevis
ENSHBUG00000010527	-	70	75.771	ENSCSEG00000019769	-	74	74.324	Cynoglossus_semilaevis
ENSHBUG00000010527	-	86	65.108	ENSCVAG00000002797	-	86	64.865	Cyprinodon_variegatus
ENSHBUG00000010527	-	100	83.792	ENSCVAG00000016981	-	100	84.709	Cyprinodon_variegatus
ENSHBUG00000010527	-	78	80.645	ENSDARG00000053810	hnrnpc	99	73.125	Danio_rerio
ENSHBUG00000010527	-	83	80.827	ENSDARG00000103845	zgc:55733	93	76.426	Danio_rerio
ENSHBUG00000010527	-	83	49.825	ENSDORG00000003721	Ralyl	79	54.468	Dipodomys_ordii
ENSHBUG00000010527	-	53	56.818	ENSETEG00000014028	RALYL	82	60.870	Echinops_telfairi
ENSHBUG00000010527	-	69	46.957	ENSEBUG00000012363	hnrnpc	67	46.087	Eptatretus_burgeri
ENSHBUG00000010527	-	66	49.537	ENSEBUG00000006049	RALYL	74	47.196	Eptatretus_burgeri
ENSHBUG00000010527	-	83	49.474	ENSEEUG00000007202	RALYL	80	54.701	Erinaceus_europaeus
ENSHBUG00000010527	-	96	79.167	ENSELUG00000004132	-	99	76.923	Esox_lucius
ENSHBUG00000010527	-	80	80.443	ENSELUG00000007714	-	93	76.895	Esox_lucius
ENSHBUG00000010527	-	84	47.569	ENSFALG00000008647	RALYL	96	57.407	Ficedula_albicollis
ENSHBUG00000010527	-	97	80.909	ENSFHEG00000007278	-	100	80.909	Fundulus_heteroclitus
ENSHBUG00000010527	-	87	76.596	ENSFHEG00000003605	-	88	74.539	Fundulus_heteroclitus
ENSHBUG00000010527	-	85	42.500	ENSGALG00000036938	RALYL	92	45.667	Gallus_gallus
ENSHBUG00000010527	-	87	76.241	ENSGAFG00000020486	-	99	68.847	Gambusia_affinis
ENSHBUG00000010527	-	97	84.713	ENSGAFG00000020992	-	100	86.943	Gambusia_affinis
ENSHBUG00000010527	-	100	80.606	ENSGACG00000017772	-	97	88.189	Gasterosteus_aculeatus
ENSHBUG00000010527	-	70	73.543	ENSGACG00000018932	-	89	68.000	Gasterosteus_aculeatus
ENSHBUG00000010527	-	87	47.000	ENSGGOG00000000841	RALYL	78	55.752	Gorilla_gorilla
ENSHBUG00000010527	-	85	48.276	ENSHGLG00000004866	RALYL	79	53.846	Heterocephalus_glaber_female
ENSHBUG00000010527	-	85	48.276	ENSHGLG00100017480	RALYL	79	53.846	Heterocephalus_glaber_male
ENSHBUG00000010527	-	82	86.496	ENSHCOG00000012333	hnrnpc	91	86.022	Hippocampus_comes
ENSHBUG00000010527	-	83	78.195	ENSIPUG00000011271	hnrnpc	97	80.000	Ictalurus_punctatus
ENSHBUG00000010527	-	83	80.451	ENSIPUG00000008666	zgc:55733	94	79.724	Ictalurus_punctatus
ENSHBUG00000010527	-	83	49.474	ENSSTOG00000012583	RALYL	80	54.043	Ictidomys_tridecemlineatus
ENSHBUG00000010527	-	86	78.777	ENSKMAG00000011170	-	84	79.848	Kryptolebias_marmoratus
ENSHBUG00000010527	-	100	86.378	ENSKMAG00000018265	-	100	85.759	Kryptolebias_marmoratus
ENSHBUG00000010527	-	86	77.338	ENSLBEG00000006979	-	85	76.892	Labrus_bergylta
ENSHBUG00000010527	-	88	72.852	ENSLBEG00000024418	-	86	72.453	Labrus_bergylta
ENSHBUG00000010527	-	100	85.938	ENSLBEG00000006193	-	100	84.639	Labrus_bergylta
ENSHBUG00000010527	-	83	70.896	ENSLOCG00000002560	hnrnpc	91	71.481	Lepisosteus_oculatus
ENSHBUG00000010527	-	87	47.000	ENSMNEG00000033288	RALYL	78	55.752	Macaca_nemestrina
ENSHBUG00000010527	-	87	47.000	ENSMLEG00000038284	RALYL	78	55.752	Mandrillus_leucophaeus
ENSHBUG00000010527	-	100	87.616	ENSMAMG00000008033	-	100	87.926	Mastacembelus_armatus
ENSHBUG00000010527	-	79	83.922	ENSMAMG00000012236	-	84	81.203	Mastacembelus_armatus
ENSHBUG00000010527	-	79	82.353	ENSMZEG00005020460	-	88	77.567	Maylandia_zebra
ENSHBUG00000010527	-	100	99.687	ENSMZEG00005024249	-	100	99.687	Maylandia_zebra
ENSHBUG00000010527	-	85	48.797	ENSMAUG00000015149	Ralyl	79	53.617	Mesocricetus_auratus
ENSHBUG00000010527	-	87	47.973	ENSMICG00000005558	RALYL	79	79.487	Microcebus_murinus
ENSHBUG00000010527	-	85	48.797	ENSMOCG00000017371	Ralyl	79	53.617	Microtus_ochrogaster
ENSHBUG00000010527	-	83	82.264	ENSMMOG00000021465	-	92	80.755	Mola_mola
ENSHBUG00000010527	-	90	87.755	ENSMMOG00000019520	-	100	82.653	Mola_mola
ENSHBUG00000010527	-	84	88.015	ENSMALG00000014623	-	84	88.390	Monopterus_albus
ENSHBUG00000010527	-	81	75.097	ENSMALG00000007520	-	85	72.763	Monopterus_albus
ENSHBUG00000010527	-	85	48.454	ENSMUSG00000039717	Ralyl	92	78.205	Mus_musculus
ENSHBUG00000010527	-	84	50.000	ENSMPUG00000010724	RALYL	79	53.617	Mustela_putorius_furo
ENSHBUG00000010527	-	85	48.797	ENSNGAG00000013375	Ralyl	79	53.617	Nannospalax_galili
ENSHBUG00000010527	-	81	82.308	ENSNBRG00000004912	-	94	80.349	Neolamprologus_brichardi
ENSHBUG00000010527	-	100	99.062	ENSNBRG00000015676	-	100	99.062	Neolamprologus_brichardi
ENSHBUG00000010527	-	84	49.117	ENSNLEG00000002702	RALYL	74	55.752	Nomascus_leucogenys
ENSHBUG00000010527	-	58	51.020	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSHBUG00000010527	-	85	48.276	ENSODEG00000001012	RALYL	79	54.274	Octodon_degus
ENSHBUG00000010527	-	79	83.529	ENSONIG00000007859	-	93	81.319	Oreochromis_niloticus
ENSHBUG00000010527	-	100	99.060	ENSONIG00000018350	-	100	99.060	Oreochromis_niloticus
ENSHBUG00000010527	-	100	85.886	ENSORLG00000003144	-	100	85.886	Oryzias_latipes
ENSHBUG00000010527	-	79	72.374	ENSORLG00000009999	-	85	69.403	Oryzias_latipes
ENSHBUG00000010527	-	79	71.984	ENSORLG00020018228	hnrnpc	85	69.030	Oryzias_latipes_hni
ENSHBUG00000010527	-	79	72.374	ENSORLG00015019755	-	85	69.403	Oryzias_latipes_hsok
ENSHBUG00000010527	-	100	85.672	ENSORLG00015009460	-	100	85.672	Oryzias_latipes_hsok
ENSHBUG00000010527	-	100	88.199	ENSOMEG00000022665	-	100	88.820	Oryzias_melastigma
ENSHBUG00000010527	-	79	73.541	ENSOMEG00000020488	-	85	70.522	Oryzias_melastigma
ENSHBUG00000010527	-	87	46.667	ENSPPAG00000038705	RALYL	78	55.752	Pan_paniscus
ENSHBUG00000010527	-	87	49.832	ENSPPRG00000018612	RALYL	78	55.947	Panthera_pardus
ENSHBUG00000010527	-	87	49.832	ENSPTIG00000020331	RALYL	78	55.947	Panthera_tigris_altaica
ENSHBUG00000010527	-	87	47.000	ENSPTRG00000020381	RALYL	78	55.752	Pan_troglodytes
ENSHBUG00000010527	-	87	47.000	ENSPANG00000029305	RALYL	78	55.752	Papio_anubis
ENSHBUG00000010527	-	74	84.874	ENSPKIG00000022837	-	98	79.503	Paramormyrops_kingsleyae
ENSHBUG00000010527	-	84	79.562	ENSPKIG00000008592	-	100	74.233	Paramormyrops_kingsleyae
ENSHBUG00000010527	-	85	48.464	ENSPSIG00000011135	RALYL	78	54.468	Pelodiscus_sinensis
ENSHBUG00000010527	-	95	62.914	ENSPMGG00000017774	-	96	62.025	Periophthalmus_magnuspinnatus
ENSHBUG00000010527	-	70	90.541	ENSPMGG00000013144	-	82	87.215	Periophthalmus_magnuspinnatus
ENSHBUG00000010527	-	85	48.797	ENSPEMG00000016447	Ralyl	79	53.617	Peromyscus_maniculatus_bairdii
ENSHBUG00000010527	-	68	52.991	ENSPMAG00000002407	RALYL	97	52.000	Petromyzon_marinus
ENSHBUG00000010527	-	100	84.877	ENSPFOG00000002643	-	100	86.111	Poecilia_formosa
ENSHBUG00000010527	-	87	76.868	ENSPFOG00000001583	-	99	70.717	Poecilia_formosa
ENSHBUG00000010527	-	100	84.923	ENSPLAG00000000061	-	100	84.000	Poecilia_latipinna
ENSHBUG00000010527	-	87	75.445	ENSPLAG00000015305	-	99	69.470	Poecilia_latipinna
ENSHBUG00000010527	-	87	78.369	ENSPMEG00000004802	-	98	70.662	Poecilia_mexicana
ENSHBUG00000010527	-	100	84.259	ENSPMEG00000016524	-	100	85.494	Poecilia_mexicana
ENSHBUG00000010527	-	79	78.516	ENSPREG00000007928	-	87	75.277	Poecilia_reticulata
ENSHBUG00000010527	-	84	89.139	ENSPREG00000001852	-	89	88.390	Poecilia_reticulata
ENSHBUG00000010527	-	58	73.786	ENSPPYG00000018710	-	68	73.786	Pongo_abelii
ENSHBUG00000010527	-	83	48.239	ENSPVAG00000010821	RALYL	78	53.419	Pteropus_vampyrus
ENSHBUG00000010527	-	90	99.652	ENSPNYG00000003747	-	96	99.652	Pundamilia_nyererei
ENSHBUG00000010527	-	81	82.692	ENSPNYG00000020293	-	87	80.000	Pundamilia_nyererei
ENSHBUG00000010527	-	83	74.539	ENSPNAG00000019200	zgc:55733	86	74.539	Pygocentrus_nattereri
ENSHBUG00000010527	-	78	80.645	ENSPNAG00000015686	hnrnpc	89	79.026	Pygocentrus_nattereri
ENSHBUG00000010527	-	84	49.117	ENSRROG00000023925	RALYL	81	77.500	Rhinopithecus_roxellana
ENSHBUG00000010527	-	84	76.557	ENSSFOG00015012015	-	95	74.462	Scleropages_formosus
ENSHBUG00000010527	-	87	77.778	ENSSFOG00015012924	-	80	100.000	Scleropages_formosus
ENSHBUG00000010527	-	79	78.431	ENSSMAG00000013592	-	99	73.209	Scophthalmus_maximus
ENSHBUG00000010527	-	100	85.015	ENSSMAG00000011147	-	100	85.627	Scophthalmus_maximus
ENSHBUG00000010527	-	87	80.714	ENSSDUG00000001723	-	99	75.312	Seriola_dumerili
ENSHBUG00000010527	-	100	87.774	ENSSDUG00000006730	-	100	86.520	Seriola_dumerili
ENSHBUG00000010527	-	85	81.985	ENSSLDG00000007454	-	87	81.111	Seriola_lalandi_dorsalis
ENSHBUG00000010527	-	84	88.015	ENSSLDG00000007474	-	92	87.266	Seriola_lalandi_dorsalis
ENSHBUG00000010527	-	60	73.786	ENSSARG00000002374	RALYL	80	46.288	Sorex_araneus
ENSHBUG00000010527	-	100	89.342	ENSSPAG00000013996	-	100	90.625	Stegastes_partitus
ENSHBUG00000010527	-	86	81.227	ENSSPAG00000023204	-	85	81.203	Stegastes_partitus
ENSHBUG00000010527	-	84	48.797	ENSTGUG00000011689	RALYL	78	55.217	Taeniopygia_guttata
ENSHBUG00000010527	-	81	80.233	ENSTRUG00000020158	-	99	72.403	Takifugu_rubripes
ENSHBUG00000010527	-	80	78.431	ENSTNIG00000000334	-	94	76.718	Tetraodon_nigroviridis
ENSHBUG00000010527	-	81	77.481	ENSTNIG00000007427	-	84	77.099	Tetraodon_nigroviridis
ENSHBUG00000010527	-	70	47.845	ENSTBEG00000005551	RALYL	92	48.101	Tupaia_belangeri
ENSHBUG00000010527	-	85	46.897	ENSTTRG00000015762	RALYL	78	52.838	Tursiops_truncatus
ENSHBUG00000010527	-	84	46.953	ENSVPAG00000008501	RALYL	78	51.542	Vicugna_pacos
ENSHBUG00000010527	-	51	83.908	ENSXCOG00000019434	-	69	88.344	Xiphophorus_couchianus
ENSHBUG00000010527	-	87	71.174	ENSXCOG00000006552	-	83	69.466	Xiphophorus_couchianus
ENSHBUG00000010527	-	84	89.139	ENSXMAG00000022849	-	86	88.390	Xiphophorus_maculatus
ENSHBUG00000010527	-	87	76.596	ENSXMAG00000009333	-	99	69.159	Xiphophorus_maculatus