EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010697 (Gene tree)
Gene ID: 102308458
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 27287 bases
Position: chrJH425354.1:43873-71159
Accession: 102308458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000009175	KH_1	PF00013.29	2e-54	1	3
ENSHBUP00000009175	KH_1	PF00013.29	2e-54	2	3
ENSHBUP00000009175	KH_1	PF00013.29	2e-54	3	3
ENSHBUP00000027483	KH_1	PF00013.29	2e-54	1	3
ENSHBUP00000027483	KH_1	PF00013.29	2e-54	2	3
ENSHBUP00000027483	KH_1	PF00013.29	2e-54	3	3
ENSHBUP00000027464	KH_1	PF00013.29	2.3e-48	1	3
ENSHBUP00000027464	KH_1	PF00013.29	2.3e-48	2	3
ENSHBUP00000027464	KH_1	PF00013.29	2.3e-48	3	3
ENSHBUP00000009175	KH_2	PF07650.17	6.1e-14	1	1
ENSHBUP00000027483	KH_2	PF07650.17	6.1e-14	1	1
ENSHBUP00000027464	KH_2	PF07650.17	6.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000687	-	5003	XM_005919868	ENSHBUP00000009175	351 (aa)	XP_005919930	UPI000674FE7F
ENSHBUT00000000678	-	4480	XM_014332882	ENSHBUP00000027483	351 (aa)	XP_014188368	UPI000674FE7F
ENSHBUT00000000723	-	948	-	ENSHBUP00000027464	315 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000010697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010697's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010697	pcbp3	88	39.062	ENSHBUG00000022849	fubp3	75	39.062
ENSHBUG00000010697	pcbp3	77	55.556	ENSHBUG00000006535	hnrpkl	55	54.545
ENSHBUG00000010697	pcbp3	87	38.806	ENSHBUG00000002485	NOVA1	82	32.558
ENSHBUG00000010697	pcbp3	95	35.915	ENSHBUG00000018217	igf2bp3	60	35.915
ENSHBUG00000010697	pcbp3	77	53.968	ENSHBUG00000010255	hnrnpk	55	53.968
ENSHBUG00000010697	pcbp3	91	35.000	ENSHBUG00000003126	igf2bp2a	71	35.000
ENSHBUG00000010697	pcbp3	93	64.653	ENSHBUG00000005329	-	71	64.653
ENSHBUG00000010697	pcbp3	66	35.211	ENSHBUG00000009835	fubp1	61	35.211
ENSHBUG00000010697	pcbp3	67	40.909	ENSHBUG00000014760	KHSRP	52	40.909
ENSHBUG00000010697	pcbp3	89	30.000	ENSHBUG00000009868	igf2bp1	59	31.387
ENSHBUG00000010697	pcbp3	96	74.675	ENSHBUG00000008769	pcbp2	95	74.675
ENSHBUG00000010697	pcbp3	66	40.625	ENSHBUG00000018543	khsrp	56	40.625
ENSHBUG00000010697	pcbp3	98	93.871	ENSHBUG00000021782	-	97	93.871
ENSHBUG00000010697	pcbp3	96	75.484	ENSHBUG00000018512	PCBP2	95	75.484
ENSHBUG00000010697	pcbp3	95	65.563	ENSHBUG00000009472	pcbp4	65	63.939
ENSHBUG00000010697	pcbp3	87	40.299	ENSHBUG00000018561	nova1	88	30.189
ENSHBUG00000010697	pcbp3	97	71.935	ENSHBUG00000012495	zgc:110045	95	71.935
ENSHBUG00000010697	pcbp3	89	39.683	ENSHBUG00000022475	-	59	39.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010697	pcbp3	99	96.178	ENSAPOG00000020003	pcbp3	87	96.178	Acanthochromis_polyacanthus
ENSHBUG00000010697	pcbp3	98	94.516	ENSAPOG00000016582	-	97	93.651	Acanthochromis_polyacanthus
ENSHBUG00000010697	pcbp3	96	87.578	ENSAMEG00000001697	-	96	86.982	Ailuropoda_melanoleuca
ENSHBUG00000010697	pcbp3	98	92.744	ENSACIG00000002739	-	97	92.744	Amphilophus_citrinellus
ENSHBUG00000010697	pcbp3	100	96.875	ENSACIG00000010933	pcbp3	100	96.875	Amphilophus_citrinellus
ENSHBUG00000010697	pcbp3	85	93.238	ENSAOCG00000007806	-	96	93.238	Amphiprion_ocellaris
ENSHBUG00000010697	pcbp3	99	96.795	ENSAOCG00000008592	-	98	96.795	Amphiprion_ocellaris
ENSHBUG00000010697	pcbp3	98	94.839	ENSAPEG00000005209	-	97	94.839	Amphiprion_percula
ENSHBUG00000010697	pcbp3	100	99.148	ENSAPEG00000008011	pcbp3	100	99.148	Amphiprion_percula
ENSHBUG00000010697	pcbp3	98	94.839	ENSATEG00000009833	-	97	94.839	Anabas_testudineus
ENSHBUG00000010697	pcbp3	95	96.418	ENSATEG00000015787	-	100	96.418	Anabas_testudineus
ENSHBUG00000010697	pcbp3	96	88.959	ENSAPLG00000002975	-	95	88.959	Anas_platyrhynchos
ENSHBUG00000010697	pcbp3	98	77.507	ENSAPLG00000008951	-	82	77.507	Anas_platyrhynchos
ENSHBUG00000010697	pcbp3	93	86.280	ENSACAG00000009819	-	95	86.280	Anolis_carolinensis
ENSHBUG00000010697	pcbp3	93	90.490	ENSACAG00000004607	-	96	90.490	Anolis_carolinensis
ENSHBUG00000010697	pcbp3	91	87.407	ENSANAG00000030702	-	95	94.714	Aotus_nancymaae
ENSHBUG00000010697	pcbp3	98	93.871	ENSACLG00000003801	-	97	93.871	Astatotilapia_calliptera
ENSHBUG00000010697	pcbp3	100	99.432	ENSACLG00000011835	pcbp3	100	99.432	Astatotilapia_calliptera
ENSHBUG00000010697	pcbp3	98	92.233	ENSAMXG00000013588	-	100	92.233	Astyanax_mexicanus
ENSHBUG00000010697	pcbp3	100	96.023	ENSAMXG00000003440	pcbp3	100	96.023	Astyanax_mexicanus
ENSHBUG00000010697	pcbp3	98	66.567	ENSAMXG00000001760	zgc:110045	73	66.567	Astyanax_mexicanus
ENSHBUG00000010697	pcbp3	90	92.140	ENSCAFG00020019472	-	81	92.140	Canis_lupus_dingo
ENSHBUG00000010697	pcbp3	96	93.069	ENSCSAG00000007440	-	86	93.069	Chlorocebus_sabaeus
ENSHBUG00000010697	pcbp3	96	93.399	ENSCPBG00000012151	-	90	93.399	Chrysemys_picta_bellii
ENSHBUG00000010697	pcbp3	98	86.730	ENSCPBG00000000733	-	72	86.730	Chrysemys_picta_bellii
ENSHBUG00000010697	pcbp3	98	77.381	ENSCSEG00000016984	-	97	77.381	Cynoglossus_semilaevis
ENSHBUG00000010697	pcbp3	99	94.569	ENSCSEG00000000822	pcbp3	100	94.569	Cynoglossus_semilaevis
ENSHBUG00000010697	pcbp3	100	99.430	ENSCVAG00000014482	pcbp3	100	99.430	Cyprinodon_variegatus
ENSHBUG00000010697	pcbp3	98	94.194	ENSCVAG00000005262	-	97	94.194	Cyprinodon_variegatus
ENSHBUG00000010697	pcbp3	100	96.307	ENSDARG00000054378	pcbp3	100	96.307	Danio_rerio
ENSHBUG00000010697	pcbp3	96	81.188	ENSETEG00000015988	-	95	81.188	Echinops_telfairi
ENSHBUG00000010697	pcbp3	89	70.667	ENSEBUG00000005495	pcbp3	68	70.667	Eptatretus_burgeri
ENSHBUG00000010697	pcbp3	96	78.361	ENSEBUG00000007485	-	92	77.626	Eptatretus_burgeri
ENSHBUG00000010697	pcbp3	93	67.110	ENSEBUG00000016192	pcbp3	99	74.906	Eptatretus_burgeri
ENSHBUG00000010697	pcbp3	98	94.194	ENSELUG00000001560	-	96	85.303	Esox_lucius
ENSHBUG00000010697	pcbp3	100	97.175	ENSELUG00000003521	pcbp3	100	97.175	Esox_lucius
ENSHBUG00000010697	pcbp3	98	77.778	ENSFALG00000004411	-	77	77.778	Ficedula_albicollis
ENSHBUG00000010697	pcbp3	96	93.377	ENSFALG00000003949	-	95	93.377	Ficedula_albicollis
ENSHBUG00000010697	pcbp3	98	94.855	ENSFHEG00000006539	-	97	94.855	Fundulus_heteroclitus
ENSHBUG00000010697	pcbp3	99	96.178	ENSFHEG00000016615	pcbp3	97	96.178	Fundulus_heteroclitus
ENSHBUG00000010697	pcbp3	98	79.518	ENSGMOG00000011992	pcbp3	96	79.580	Gadus_morhua
ENSHBUG00000010697	pcbp3	97	69.789	ENSGMOG00000008611	-	100	69.789	Gadus_morhua
ENSHBUG00000010697	pcbp3	93	88.150	ENSGALG00000004394	-	98	88.587	Gallus_gallus
ENSHBUG00000010697	pcbp3	93	86.544	ENSGALG00000013155	-	98	83.537	Gallus_gallus
ENSHBUG00000010697	pcbp3	95	94.627	ENSGAFG00000011430	pcbp3	96	94.627	Gambusia_affinis
ENSHBUG00000010697	pcbp3	98	93.871	ENSGAFG00000010274	-	100	89.489	Gambusia_affinis
ENSHBUG00000010697	pcbp3	95	84.375	ENSGACG00000014955	-	97	84.375	Gasterosteus_aculeatus
ENSHBUG00000010697	pcbp3	99	87.048	ENSGACG00000002266	-	97	87.048	Gasterosteus_aculeatus
ENSHBUG00000010697	pcbp3	94	80.916	ENSGAGG00000000271	-	100	88.346	Gopherus_agassizii
ENSHBUG00000010697	pcbp3	77	87.368	ENSGAGG00000006956	-	93	82.051	Gopherus_agassizii
ENSHBUG00000010697	pcbp3	100	99.145	ENSHCOG00000017868	pcbp3	100	99.145	Hippocampus_comes
ENSHBUG00000010697	pcbp3	98	89.644	ENSHCOG00000006067	-	96	89.644	Hippocampus_comes
ENSHBUG00000010697	pcbp3	98	93.871	ENSIPUG00000006238	pcbp3	99	93.623	Ictalurus_punctatus
ENSHBUG00000010697	pcbp3	98	92.903	ENSKMAG00000018530	-	100	88.636	Kryptolebias_marmoratus
ENSHBUG00000010697	pcbp3	100	98.864	ENSKMAG00000003046	pcbp3	100	98.864	Kryptolebias_marmoratus
ENSHBUG00000010697	pcbp3	100	78.348	ENSLBEG00000006542	-	100	78.917	Labrus_bergylta
ENSHBUG00000010697	pcbp3	98	96.452	ENSLBEG00000006201	pcbp3	95	96.452	Labrus_bergylta
ENSHBUG00000010697	pcbp3	97	85.205	ENSLACG00000010386	pcbp3	77	85.205	Latimeria_chalumnae
ENSHBUG00000010697	pcbp3	98	77.596	ENSLACG00000010804	zgc:110045	77	77.596	Latimeria_chalumnae
ENSHBUG00000010697	pcbp3	93	85.671	ENSLOCG00000005058	zgc:110045	80	85.671	Lepisosteus_oculatus
ENSHBUG00000010697	pcbp3	96	93.491	ENSLOCG00000009369	pcbp3	98	93.491	Lepisosteus_oculatus
ENSHBUG00000010697	pcbp3	98	93.548	ENSMAMG00000011620	-	97	93.548	Mastacembelus_armatus
ENSHBUG00000010697	pcbp3	100	95.873	ENSMAMG00000022336	pcbp3	95	95.873	Mastacembelus_armatus
ENSHBUG00000010697	pcbp3	100	96.591	ENSMZEG00005008993	pcbp3	100	96.591	Maylandia_zebra
ENSHBUG00000010697	pcbp3	100	86.325	ENSMZEG00005014882	-	100	86.441	Maylandia_zebra
ENSHBUG00000010697	pcbp3	94	79.885	ENSMGAG00000001883	-	96	79.885	Meleagris_gallopavo
ENSHBUG00000010697	pcbp3	98	77.778	ENSMGAG00000006794	-	77	77.778	Meleagris_gallopavo
ENSHBUG00000010697	pcbp3	99	94.888	ENSMMOG00000000730	pcbp3	88	94.888	Mola_mola
ENSHBUG00000010697	pcbp3	98	93.871	ENSMMOG00000005216	-	96	93.871	Mola_mola
ENSHBUG00000010697	pcbp3	72	85.514	ENSMODG00000027884	-	93	85.514	Monodelphis_domestica
ENSHBUG00000010697	pcbp3	100	96.307	ENSMALG00000000691	pcbp3	100	96.307	Monopterus_albus
ENSHBUG00000010697	pcbp3	96	84.161	ENSMPUG00000001779	-	87	84.161	Mustela_putorius_furo
ENSHBUG00000010697	pcbp3	100	97.151	ENSNBRG00000016409	-	100	97.151	Neolamprologus_brichardi
ENSHBUG00000010697	pcbp3	100	88.547	ENSNBRG00000016714	-	100	88.547	Neolamprologus_brichardi
ENSHBUG00000010697	pcbp3	93	87.791	ENSOPRG00000003431	-	99	87.791	Ochotona_princeps
ENSHBUG00000010697	pcbp3	98	93.871	ENSONIG00000004611	-	97	93.871	Oreochromis_niloticus
ENSHBUG00000010697	pcbp3	95	94.602	ENSONIG00000012122	-	98	94.602	Oreochromis_niloticus
ENSHBUG00000010697	pcbp3	96	93.046	ENSOCUG00000002696	-	86	93.046	Oryctolagus_cuniculus
ENSHBUG00000010697	pcbp3	98	96.774	ENSORLG00000000059	pcbp3	100	96.774	Oryzias_latipes
ENSHBUG00000010697	pcbp3	98	93.871	ENSORLG00000022739	-	97	93.871	Oryzias_latipes
ENSHBUG00000010697	pcbp3	98	93.548	ENSORLG00020006124	-	97	93.548	Oryzias_latipes_hni
ENSHBUG00000010697	pcbp3	98	96.774	ENSORLG00020012671	pcbp3	97	96.774	Oryzias_latipes_hni
ENSHBUG00000010697	pcbp3	98	96.774	ENSORLG00015000429	pcbp3	97	96.774	Oryzias_latipes_hsok
ENSHBUG00000010697	pcbp3	98	93.871	ENSORLG00015008051	-	95	93.871	Oryzias_latipes_hsok
ENSHBUG00000010697	pcbp3	98	93.548	ENSOMEG00000020162	-	97	93.548	Oryzias_melastigma
ENSHBUG00000010697	pcbp3	88	99.278	ENSOMEG00000020811	pcbp3	96	99.278	Oryzias_melastigma
ENSHBUG00000010697	pcbp3	96	80.460	ENSOGAG00000008044	-	96	82.436	Otolemur_garnettii
ENSHBUG00000010697	pcbp3	98	94.175	ENSPKIG00000019329	pcbp3	98	93.038	Paramormyrops_kingsleyae
ENSHBUG00000010697	pcbp3	78	83.684	ENSPKIG00000020913	-	91	79.048	Paramormyrops_kingsleyae
ENSHBUG00000010697	pcbp3	96	79.375	ENSPSIG00000014970	-	95	80.000	Pelodiscus_sinensis
ENSHBUG00000010697	pcbp3	94	80.916	ENSPSIG00000008350	-	72	80.916	Pelodiscus_sinensis
ENSHBUG00000010697	pcbp3	100	97.727	ENSPMGG00000022383	pcbp3	100	97.727	Periophthalmus_magnuspinnatus
ENSHBUG00000010697	pcbp3	96	72.078	ENSPMAG00000004551	pcbp3	88	72.078	Petromyzon_marinus
ENSHBUG00000010697	pcbp3	77	84.574	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSHBUG00000010697	pcbp3	93	94.833	ENSPCIG00000028092	-	96	94.833	Phascolarctos_cinereus
ENSHBUG00000010697	pcbp3	97	90.881	ENSPLAG00000004074	-	89	90.881	Poecilia_latipinna
ENSHBUG00000010697	pcbp3	100	83.709	ENSPLAG00000011449	pcbp3	100	83.709	Poecilia_latipinna
ENSHBUG00000010697	pcbp3	100	87.749	ENSPMEG00000006653	-	100	87.749	Poecilia_mexicana
ENSHBUG00000010697	pcbp3	100	97.746	ENSPMEG00000021239	pcbp3	100	97.746	Poecilia_mexicana
ENSHBUG00000010697	pcbp3	99	94.904	ENSPREG00000015736	pcbp3	100	94.904	Poecilia_reticulata
ENSHBUG00000010697	pcbp3	98	93.871	ENSPREG00000020585	-	96	93.871	Poecilia_reticulata
ENSHBUG00000010697	pcbp3	99	99.681	ENSPNYG00000012326	pcbp3	96	99.681	Pundamilia_nyererei
ENSHBUG00000010697	pcbp3	98	93.871	ENSPNYG00000013205	-	96	93.871	Pundamilia_nyererei
ENSHBUG00000010697	pcbp3	98	94.516	ENSPNAG00000015104	pcbp3	97	94.516	Pygocentrus_nattereri
ENSHBUG00000010697	pcbp3	100	94.318	ENSPNAG00000008541	-	100	94.318	Pygocentrus_nattereri
ENSHBUG00000010697	pcbp3	96	93.069	ENSRNOG00000001245	Pcbp3	95	93.069	Rattus_norvegicus
ENSHBUG00000010697	pcbp3	96	83.810	ENSRBIG00000028177	-	98	78.474	Rhinopithecus_bieti
ENSHBUG00000010697	pcbp3	96	87.578	ENSSHAG00000007890	-	95	87.578	Sarcophilus_harrisii
ENSHBUG00000010697	pcbp3	96	84.768	ENSSFOG00015007118	-	93	84.768	Scleropages_formosus
ENSHBUG00000010697	pcbp3	98	94.822	ENSSFOG00015010205	pcbp3	100	94.311	Scleropages_formosus
ENSHBUG00000010697	pcbp3	100	94.872	ENSSFOG00015014706	pcbp3	100	94.872	Scleropages_formosus
ENSHBUG00000010697	pcbp3	98	96.785	ENSSMAG00000011929	pcbp3	98	96.785	Scophthalmus_maximus
ENSHBUG00000010697	pcbp3	98	93.871	ENSSMAG00000003135	-	97	93.871	Scophthalmus_maximus
ENSHBUG00000010697	pcbp3	98	90.735	ENSSDUG00000008502	-	100	88.604	Seriola_dumerili
ENSHBUG00000010697	pcbp3	95	97.305	ENSSDUG00000011608	pcbp3	99	97.305	Seriola_dumerili
ENSHBUG00000010697	pcbp3	98	94.516	ENSSLDG00000020161	-	100	90.057	Seriola_lalandi_dorsalis
ENSHBUG00000010697	pcbp3	95	97.305	ENSSLDG00000008518	pcbp3	99	97.305	Seriola_lalandi_dorsalis
ENSHBUG00000010697	pcbp3	91	84.828	ENSSPUG00000013214	-	91	84.828	Sphenodon_punctatus
ENSHBUG00000010697	pcbp3	100	85.795	ENSSPAG00000023341	-	100	85.795	Stegastes_partitus
ENSHBUG00000010697	pcbp3	85	93.238	ENSSPAG00000004190	-	96	93.238	Stegastes_partitus
ENSHBUG00000010697	pcbp3	96	83.333	ENSTGUG00000003316	-	95	83.333	Taeniopygia_guttata
ENSHBUG00000010697	pcbp3	98	85.209	ENSTGUG00000008158	-	98	85.209	Taeniopygia_guttata
ENSHBUG00000010697	pcbp3	88	96.751	ENSTRUG00000006280	-	88	96.751	Takifugu_rubripes
ENSHBUG00000010697	pcbp3	100	92.045	ENSTRUG00000013604	pcbp3	100	92.045	Takifugu_rubripes
ENSHBUG00000010697	pcbp3	93	88.439	ENSTTRG00000015075	-	96	88.439	Tursiops_truncatus
ENSHBUG00000010697	pcbp3	95	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSHBUG00000010697	pcbp3	96	86.378	ENSXETG00000011483	pcbp1	95	86.378	Xenopus_tropicalis
ENSHBUG00000010697	pcbp3	100	97.746	ENSXCOG00000020481	pcbp3	100	97.746	Xiphophorus_couchianus
ENSHBUG00000010697	pcbp3	98	94.194	ENSXMAG00000028711	-	100	89.773	Xiphophorus_maculatus
ENSHBUG00000010697	pcbp3	100	99.148	ENSXMAG00000008175	pcbp3	100	99.148	Xiphophorus_maculatus