EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010735 (Gene tree)
Gene ID: 102307758
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: RNA polymerase II-associated protein 3-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 10162 bases
Position: chrJH425430.1:210053-220214
Accession: 102307758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000009220	RRM_1	PF00076.22	9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000613	-	3067	XM_005929622	ENSHBUP00000009220	661 (aa)	XP_005929684	UPI0003BCC721

Gene Model

Click here to download ENSHBUG00000010735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010735	si:dkey-33c12.4	68	32.639	ENSHBUG00000016720	-	83	32.639

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010735	si:dkey-33c12.4	98	64.820	ENSAPOG00000005058	si:dkey-33c12.4	98	64.820	Acanthochromis_polyacanthus
ENSHBUG00000010735	si:dkey-33c12.4	55	32.620	ENSAPOG00000019633	zgc:123010	58	32.884	Acanthochromis_polyacanthus
ENSHBUG00000010735	si:dkey-33c12.4	55	32.620	ENSAOCG00000005910	zgc:123010	58	32.884	Amphiprion_ocellaris
ENSHBUG00000010735	si:dkey-33c12.4	98	64.060	ENSAOCG00000020066	si:dkey-33c12.4	97	64.511	Amphiprion_ocellaris
ENSHBUG00000010735	si:dkey-33c12.4	55	32.620	ENSAPEG00000014305	zgc:123010	62	32.620	Amphiprion_percula
ENSHBUG00000010735	si:dkey-33c12.4	99	61.145	ENSATEG00000018885	si:dkey-33c12.4	99	60.805	Anabas_testudineus
ENSHBUG00000010735	si:dkey-33c12.4	64	35.461	ENSATEG00000022160	-	80	35.211	Anabas_testudineus
ENSHBUG00000010735	si:dkey-33c12.4	55	40.751	ENSATEG00000018302	-	80	35.539	Anabas_testudineus
ENSHBUG00000010735	si:dkey-33c12.4	68	32.639	ENSACLG00000012346	-	65	36.634	Astatotilapia_calliptera
ENSHBUG00000010735	si:dkey-33c12.4	100	98.943	ENSACLG00000014192	si:dkey-33c12.4	100	97.819	Astatotilapia_calliptera
ENSHBUG00000010735	si:dkey-33c12.4	51	42.898	ENSACLG00000003019	-	74	36.998	Astatotilapia_calliptera
ENSHBUG00000010735	si:dkey-33c12.4	96	37.407	ENSAMXG00000010871	si:dkey-33c12.4	56	45.547	Astyanax_mexicanus
ENSHBUG00000010735	si:dkey-33c12.4	85	32.241	ENSCPBG00000024454	-	50	35.121	Chrysemys_picta_bellii
ENSHBUG00000010735	si:dkey-33c12.4	76	35.028	ENSCSEG00000002755	-	63	41.081	Cynoglossus_semilaevis
ENSHBUG00000010735	si:dkey-33c12.4	62	38.795	ENSCVAG00000004187	-	75	36.326	Cyprinodon_variegatus
ENSHBUG00000010735	si:dkey-33c12.4	100	56.587	ENSCVAG00000006564	-	100	54.940	Cyprinodon_variegatus
ENSHBUG00000010735	si:dkey-33c12.4	80	31.218	ENSDARG00000039082	zgc:123010	68	31.218	Danio_rerio
ENSHBUG00000010735	si:dkey-33c12.4	96	35.410	ENSDARG00000057890	si:dkey-33c12.4	55	42.744	Danio_rerio
ENSHBUG00000010735	si:dkey-33c12.4	96	39.528	ENSELUG00000002009	si:dkey-33c12.4	78	60.714	Esox_lucius
ENSHBUG00000010735	si:dkey-33c12.4	83	37.234	ENSELUG00000001633	-	60	40.648	Esox_lucius
ENSHBUG00000010735	si:dkey-33c12.4	56	36.456	ENSFHEG00000009983	-	51	42.547	Fundulus_heteroclitus
ENSHBUG00000010735	si:dkey-33c12.4	55	31.915	ENSFHEG00000002306	zgc:123010	59	31.649	Fundulus_heteroclitus
ENSHBUG00000010735	si:dkey-33c12.4	99	62.349	ENSFHEG00000005521	si:dkey-33c12.4	100	60.805	Fundulus_heteroclitus
ENSHBUG00000010735	si:dkey-33c12.4	51	36.782	ENSGMOG00000018473	zgc:123010	88	36.782	Gadus_morhua
ENSHBUG00000010735	si:dkey-33c12.4	50	43.314	ENSGAFG00000016594	-	69	36.703	Gambusia_affinis
ENSHBUG00000010735	si:dkey-33c12.4	56	32.723	ENSGAFG00000009373	zgc:123010	55	42.236	Gambusia_affinis
ENSHBUG00000010735	si:dkey-33c12.4	99	61.712	ENSGAFG00000017596	si:dkey-33c12.4	99	61.862	Gambusia_affinis
ENSHBUG00000010735	si:dkey-33c12.4	97	38.393	ENSIPUG00000005998	si:dkey-33c12.4	99	37.775	Ictalurus_punctatus
ENSHBUG00000010735	si:dkey-33c12.4	52	41.834	ENSKMAG00000006468	-	56	41.834	Kryptolebias_marmoratus
ENSHBUG00000010735	si:dkey-33c12.4	55	32.888	ENSKMAG00000021350	zgc:123010	59	32.888	Kryptolebias_marmoratus
ENSHBUG00000010735	si:dkey-33c12.4	99	60.693	ENSKMAG00000016610	si:dkey-33c12.4	99	61.295	Kryptolebias_marmoratus
ENSHBUG00000010735	si:dkey-33c12.4	61	39.192	ENSLBEG00000028046	-	62	39.524	Labrus_bergylta
ENSHBUG00000010735	si:dkey-33c12.4	99	56.061	ENSLBEG00000021088	-	99	56.970	Labrus_bergylta
ENSHBUG00000010735	si:dkey-33c12.4	55	32.888	ENSLBEG00000023984	zgc:123010	59	33.154	Labrus_bergylta
ENSHBUG00000010735	si:dkey-33c12.4	90	55.556	ENSLBEG00000017203	-	99	56.601	Labrus_bergylta
ENSHBUG00000010735	si:dkey-33c12.4	70	32.573	ENSLBEG00000013518	-	64	39.877	Labrus_bergylta
ENSHBUG00000010735	si:dkey-33c12.4	88	31.220	ENSLACG00000004602	-	82	31.055	Latimeria_chalumnae
ENSHBUG00000010735	si:dkey-33c12.4	67	33.974	ENSLOCG00000008967	zgc:123010	82	32.692	Lepisosteus_oculatus
ENSHBUG00000010735	si:dkey-33c12.4	84	37.351	ENSLOCG00000001861	-	54	42.175	Lepisosteus_oculatus
ENSHBUG00000010735	si:dkey-33c12.4	99	65.106	ENSMAMG00000000111	si:dkey-33c12.4	99	65.408	Mastacembelus_armatus
ENSHBUG00000010735	si:dkey-33c12.4	75	35.938	ENSMAMG00000004311	-	58	43.288	Mastacembelus_armatus
ENSHBUG00000010735	si:dkey-33c12.4	61	39.618	ENSMZEG00005000585	-	74	36.998	Maylandia_zebra
ENSHBUG00000010735	si:dkey-33c12.4	100	99.547	ENSMZEG00005014276	si:dkey-33c12.4	100	99.547	Maylandia_zebra
ENSHBUG00000010735	si:dkey-33c12.4	55	33.155	ENSMALG00000017698	zgc:123010	59	33.423	Monopterus_albus
ENSHBUG00000010735	si:dkey-33c12.4	99	61.608	ENSMALG00000002265	si:dkey-33c12.4	99	62.745	Monopterus_albus
ENSHBUG00000010735	si:dkey-33c12.4	60	38.983	ENSMALG00000003167	-	69	36.008	Monopterus_albus
ENSHBUG00000010735	si:dkey-33c12.4	52	42.500	ENSONIG00000007538	-	90	55.357	Oreochromis_niloticus
ENSHBUG00000010735	si:dkey-33c12.4	55	30.239	ENSONIG00000018353	zgc:123010	63	30.585	Oreochromis_niloticus
ENSHBUG00000010735	si:dkey-33c12.4	87	35.204	ENSORLG00000030385	-	69	36.036	Oryzias_latipes
ENSHBUG00000010735	si:dkey-33c12.4	97	52.411	ENSORLG00000029651	si:dkey-33c12.4	96	52.019	Oryzias_latipes
ENSHBUG00000010735	si:dkey-33c12.4	97	53.125	ENSORLG00020008750	si:dkey-33c12.4	96	50.822	Oryzias_latipes_hni
ENSHBUG00000010735	si:dkey-33c12.4	80	36.229	ENSORLG00015008400	-	69	36.623	Oryzias_latipes_hsok
ENSHBUG00000010735	si:dkey-33c12.4	98	50.963	ENSOMEG00000008913	-	98	51.488	Oryzias_melastigma
ENSHBUG00000010735	si:dkey-33c12.4	81	34.489	ENSOMEG00000009428	-	51	42.604	Oryzias_melastigma
ENSHBUG00000010735	si:dkey-33c12.4	61	30.357	ENSPKIG00000015521	zgc:123010	87	33.588	Paramormyrops_kingsleyae
ENSHBUG00000010735	si:dkey-33c12.4	92	38.462	ENSPKIG00000011819	-	52	45.924	Paramormyrops_kingsleyae
ENSHBUG00000010735	si:dkey-33c12.4	51	38.813	ENSPMGG00000020251	zgc:123010	77	38.813	Periophthalmus_magnuspinnatus
ENSHBUG00000010735	si:dkey-33c12.4	99	61.070	ENSPFOG00000009143	si:dkey-33c12.4	99	61.367	Poecilia_formosa
ENSHBUG00000010735	si:dkey-33c12.4	50	42.857	ENSPFOG00000017092	-	84	38.995	Poecilia_formosa
ENSHBUG00000010735	si:dkey-33c12.4	96	61.085	ENSPLAG00000022537	si:dkey-33c12.4	99	61.385	Poecilia_latipinna
ENSHBUG00000010735	si:dkey-33c12.4	50	42.353	ENSPMEG00000009905	-	64	38.186	Poecilia_mexicana
ENSHBUG00000010735	si:dkey-33c12.4	99	60.475	ENSPMEG00000015590	si:dkey-33c12.4	99	60.921	Poecilia_mexicana
ENSHBUG00000010735	si:dkey-33c12.4	50	42.690	ENSPREG00000016861	-	66	38.333	Poecilia_reticulata
ENSHBUG00000010735	si:dkey-33c12.4	61	39.618	ENSPNYG00000001047	-	74	36.998	Pundamilia_nyererei
ENSHBUG00000010735	si:dkey-33c12.4	100	99.698	ENSPNYG00000018262	si:dkey-33c12.4	100	99.698	Pundamilia_nyererei
ENSHBUG00000010735	si:dkey-33c12.4	97	37.296	ENSPNAG00000018386	si:dkey-33c12.4	76	38.004	Pygocentrus_nattereri
ENSHBUG00000010735	si:dkey-33c12.4	67	30.531	ENSPNAG00000007579	zgc:123010	59	32.796	Pygocentrus_nattereri
ENSHBUG00000010735	si:dkey-33c12.4	84	38.986	ENSSFOG00015009199	-	79	37.828	Scleropages_formosus
ENSHBUG00000010735	si:dkey-33c12.4	54	42.936	ENSSFOG00015005186	-	54	42.936	Scleropages_formosus
ENSHBUG00000010735	si:dkey-33c12.4	66	31.757	ENSSFOG00015021394	zgc:123010	84	31.206	Scleropages_formosus
ENSHBUG00000010735	si:dkey-33c12.4	55	31.551	ENSSMAG00000002904	zgc:123010	63	42.208	Scophthalmus_maximus
ENSHBUG00000010735	si:dkey-33c12.4	99	60.329	ENSSMAG00000008147	si:dkey-33c12.4	99	60.928	Scophthalmus_maximus
ENSHBUG00000010735	si:dkey-33c12.4	74	35.130	ENSSMAG00000010960	-	55	41.274	Scophthalmus_maximus
ENSHBUG00000010735	si:dkey-33c12.4	55	32.620	ENSSDUG00000008651	zgc:123010	58	32.620	Seriola_dumerili
ENSHBUG00000010735	si:dkey-33c12.4	99	65.913	ENSSDUG00000003213	si:dkey-33c12.4	99	66.012	Seriola_dumerili
ENSHBUG00000010735	si:dkey-33c12.4	70	36.842	ENSSDUG00000010976	-	72	37.185	Seriola_dumerili
ENSHBUG00000010735	si:dkey-33c12.4	73	36.660	ENSSLDG00000012846	-	75	36.511	Seriola_lalandi_dorsalis
ENSHBUG00000010735	si:dkey-33c12.4	55	32.620	ENSSLDG00000019386	zgc:123010	61	32.884	Seriola_lalandi_dorsalis
ENSHBUG00000010735	si:dkey-33c12.4	99	66.009	ENSSLDG00000009448	si:dkey-33c12.4	99	66.109	Seriola_lalandi_dorsalis
ENSHBUG00000010735	si:dkey-33c12.4	55	33.422	ENSSPAG00000013621	zgc:123010	58	33.693	Stegastes_partitus
ENSHBUG00000010735	si:dkey-33c12.4	100	66.029	ENSSPAG00000022577	-	100	66.765	Stegastes_partitus
ENSHBUG00000010735	si:dkey-33c12.4	72	35.404	ENSSPAG00000004843	-	52	42.416	Stegastes_partitus
ENSHBUG00000010735	si:dkey-33c12.4	59	56.203	ENSTRUG00000022374	si:dkey-33c12.4	90	46.747	Takifugu_rubripes
ENSHBUG00000010735	si:dkey-33c12.4	65	34.965	ENSTRUG00000000057	-	61	36.436	Takifugu_rubripes
ENSHBUG00000010735	si:dkey-33c12.4	54	31.351	ENSTNIG00000001303	zgc:123010	91	30.811	Tetraodon_nigroviridis
ENSHBUG00000010735	si:dkey-33c12.4	54	31.989	ENSXCOG00000012281	zgc:123010	72	31.720	Xiphophorus_couchianus
ENSHBUG00000010735	si:dkey-33c12.4	99	61.955	ENSXMAG00000018535	si:dkey-33c12.4	99	62.406	Xiphophorus_maculatus