EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010742 (Gene tree)
Gene ID: 102301795
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 47117 bases
Position: chrJH425359.1:41926-89042
Accession: 102301795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027501	ResIII	PF04851.15	6.6e-07	1	1
ENSHBUP00000009192	ResIII	PF04851.15	6.9e-07	1	1
ENSHBUP00000009216	ResIII	PF04851.15	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000609	-	7940	XM_005920690	ENSHBUP00000009216	1580 (aa)	XP_005920752	UPI0003BD04D5
ENSHBUT00000000636	-	7856	XM_005920692	ENSHBUP00000027501	1552 (aa)	XP_005920754	UPI0003BCE859
ENSHBUT00000000668	-	8105	XM_005920693	ENSHBUP00000009192	1500 (aa)	XP_005920755	-

Gene Model

Click here to download ENSHBUG00000010742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010742	si:ch73-63e15.2	63	63.761	ENSHBUG00000011910	sbno1	67	67.755

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010742	si:ch73-63e15.2	76	68.458	ENSG00000064932	SBNO2	87	68.636	Homo_sapiens
ENSHBUG00000010742	si:ch73-63e15.2	100	82.777	ENSAPOG00000003185	si:ch73-63e15.2	100	81.976	Acanthochromis_polyacanthus
ENSHBUG00000010742	si:ch73-63e15.2	100	82.711	ENSAOCG00000016581	si:ch73-63e15.2	93	89.278	Amphiprion_ocellaris
ENSHBUG00000010742	si:ch73-63e15.2	100	82.580	ENSAPEG00000008862	si:ch73-63e15.2	99	83.078	Amphiprion_percula
ENSHBUG00000010742	si:ch73-63e15.2	100	77.483	ENSATEG00000023838	si:ch73-63e15.2	99	84.412	Anabas_testudineus
ENSHBUG00000010742	si:ch73-63e15.2	76	71.453	ENSAPLG00000007158	SBNO2	90	71.367	Anas_platyrhynchos
ENSHBUG00000010742	si:ch73-63e15.2	75	68.636	ENSANAG00000026685	SBNO2	88	68.375	Aotus_nancymaae
ENSHBUG00000010742	si:ch73-63e15.2	100	99.420	ENSACLG00000005090	si:ch73-63e15.2	100	99.420	Astatotilapia_calliptera
ENSHBUG00000010742	si:ch73-63e15.2	86	73.632	ENSAMXG00000015881	si:ch73-63e15.2	88	77.585	Astyanax_mexicanus
ENSHBUG00000010742	si:ch73-63e15.2	79	78.028	ENSAMXG00000018868	sbno2a	96	79.545	Astyanax_mexicanus
ENSHBUG00000010742	si:ch73-63e15.2	77	68.777	ENSBTAG00000020780	SBNO2	89	68.336	Bos_taurus
ENSHBUG00000010742	si:ch73-63e15.2	76	69.784	ENSCAFG00000019543	SBNO2	83	69.524	Canis_familiaris
ENSHBUG00000010742	si:ch73-63e15.2	76	69.784	ENSCAFG00020017115	SBNO2	88	69.524	Canis_lupus_dingo
ENSHBUG00000010742	si:ch73-63e15.2	77	68.777	ENSCHIG00000026127	SBNO2	86	69.297	Capra_hircus
ENSHBUG00000010742	si:ch73-63e15.2	75	66.986	ENSCAPG00000005731	SBNO2	94	66.725	Cavia_aperea
ENSHBUG00000010742	si:ch73-63e15.2	76	66.955	ENSCPOG00000007477	SBNO2	86	66.638	Cavia_porcellus
ENSHBUG00000010742	si:ch73-63e15.2	76	68.135	ENSCCAG00000037518	SBNO2	89	67.990	Cebus_capucinus
ENSHBUG00000010742	si:ch73-63e15.2	76	68.658	ENSCATG00000037046	SBNO2	87	68.723	Cercocebus_atys
ENSHBUG00000010742	si:ch73-63e15.2	75	69.150	ENSCLAG00000010178	SBNO2	98	69.150	Chinchilla_lanigera
ENSHBUG00000010742	si:ch73-63e15.2	76	68.571	ENSCSAG00000012317	SBNO2	84	68.571	Chlorocebus_sabaeus
ENSHBUG00000010742	si:ch73-63e15.2	77	69.316	ENSCPBG00000008920	SBNO2	80	82.432	Chrysemys_picta_bellii
ENSHBUG00000010742	si:ch73-63e15.2	72	68.445	ENSCANG00000036745	SBNO2	95	68.512	Colobus_angolensis_palliatus
ENSHBUG00000010742	si:ch73-63e15.2	75	66.754	ENSCGRG00001023960	Sbno2	85	66.897	Cricetulus_griseus_chok1gshd
ENSHBUG00000010742	si:ch73-63e15.2	75	68.261	ENSCGRG00000011984	Sbno2	85	68.394	Cricetulus_griseus_crigri
ENSHBUG00000010742	si:ch73-63e15.2	79	83.151	ENSCSEG00000006856	si:ch73-63e15.2	96	86.347	Cynoglossus_semilaevis
ENSHBUG00000010742	si:ch73-63e15.2	100	77.264	ENSCVAG00000005663	si:ch73-63e15.2	100	77.358	Cyprinodon_variegatus
ENSHBUG00000010742	si:ch73-63e15.2	100	73.152	ENSDARG00000016188	SBNO2	85	78.877	Danio_rerio
ENSHBUG00000010742	si:ch73-63e15.2	79	76.783	ENSDARG00000098801	sbno2a	94	74.345	Danio_rerio
ENSHBUG00000010742	si:ch73-63e15.2	76	69.384	ENSDORG00000002916	Sbno2	85	69.211	Dipodomys_ordii
ENSHBUG00000010742	si:ch73-63e15.2	76	69.471	ENSEASG00005021621	SBNO2	88	69.304	Equus_asinus_asinus
ENSHBUG00000010742	si:ch73-63e15.2	76	69.124	ENSECAG00000011827	SBNO2	88	69.391	Equus_caballus
ENSHBUG00000010742	si:ch73-63e15.2	100	73.100	ENSELUG00000020457	si:ch73-63e15.2	100	72.201	Esox_lucius
ENSHBUG00000010742	si:ch73-63e15.2	77	70.583	ENSFALG00000013988	SBNO2	90	67.837	Ficedula_albicollis
ENSHBUG00000010742	si:ch73-63e15.2	74	66.844	ENSFDAG00000015186	SBNO2	86	67.286	Fukomys_damarensis
ENSHBUG00000010742	si:ch73-63e15.2	100	77.497	ENSFHEG00000022262	si:ch73-63e15.2	100	77.087	Fundulus_heteroclitus
ENSHBUG00000010742	si:ch73-63e15.2	75	86.661	ENSGMOG00000007542	si:ch73-63e15.2	95	86.661	Gadus_morhua
ENSHBUG00000010742	si:ch73-63e15.2	77	71.115	ENSGALG00000037522	SBNO2	84	71.711	Gallus_gallus
ENSHBUG00000010742	si:ch73-63e15.2	78	87.766	ENSGAFG00000004860	si:ch73-63e15.2	93	86.737	Gambusia_affinis
ENSHBUG00000010742	si:ch73-63e15.2	76	87.641	ENSGACG00000013190	si:ch73-63e15.2	96	86.942	Gasterosteus_aculeatus
ENSHBUG00000010742	si:ch73-63e15.2	88	64.762	ENSGAGG00000008348	SBNO2	89	69.576	Gopherus_agassizii
ENSHBUG00000010742	si:ch73-63e15.2	76	68.631	ENSHGLG00000008739	SBNO2	85	68.480	Heterocephalus_glaber_female
ENSHBUG00000010742	si:ch73-63e15.2	76	67.993	ENSHGLG00100005269	SBNO2	98	68.935	Heterocephalus_glaber_male
ENSHBUG00000010742	si:ch73-63e15.2	79	84.020	ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	Hippocampus_comes
ENSHBUG00000010742	si:ch73-63e15.2	78	80.086	ENSIPUG00000000537	si:ch73-63e15.2	92	76.187	Ictalurus_punctatus
ENSHBUG00000010742	si:ch73-63e15.2	99	65.855	ENSIPUG00000019672	sbno2	99	75.556	Ictalurus_punctatus
ENSHBUG00000010742	si:ch73-63e15.2	76	69.037	ENSSTOG00000025832	SBNO2	91	65.468	Ictidomys_tridecemlineatus
ENSHBUG00000010742	si:ch73-63e15.2	76	66.234	ENSJJAG00000017397	Sbno2	91	62.729	Jaculus_jaculus
ENSHBUG00000010742	si:ch73-63e15.2	100	77.653	ENSKMAG00000005541	si:ch73-63e15.2	100	77.851	Kryptolebias_marmoratus
ENSHBUG00000010742	si:ch73-63e15.2	99	77.849	ENSLBEG00000025016	si:ch73-63e15.2	99	86.667	Labrus_bergylta
ENSHBUG00000010742	si:ch73-63e15.2	89	75.559	ENSLOCG00000004643	si:ch73-63e15.2	85	83.536	Lepisosteus_oculatus
ENSHBUG00000010742	si:ch73-63e15.2	76	64.675	ENSLAFG00000008824	SBNO2	89	65.442	Loxodonta_africana
ENSHBUG00000010742	si:ch73-63e15.2	76	66.955	ENSMFAG00000040030	SBNO2	89	67.014	Macaca_fascicularis
ENSHBUG00000010742	si:ch73-63e15.2	76	68.571	ENSMMUG00000010886	SBNO2	88	66.867	Macaca_mulatta
ENSHBUG00000010742	si:ch73-63e15.2	76	68.485	ENSMNEG00000039927	SBNO2	87	68.549	Macaca_nemestrina
ENSHBUG00000010742	si:ch73-63e15.2	70	69.202	ENSMLEG00000038556	SBNO2	98	65.060	Mandrillus_leucophaeus
ENSHBUG00000010742	si:ch73-63e15.2	100	78.821	ENSMAMG00000018758	si:ch73-63e15.2	99	79.698	Mastacembelus_armatus
ENSHBUG00000010742	si:ch73-63e15.2	100	99.467	ENSMZEG00005010682	si:ch73-63e15.2	100	99.430	Maylandia_zebra
ENSHBUG00000010742	si:ch73-63e15.2	75	71.837	ENSMGAG00000003801	SBNO2	89	71.750	Meleagris_gallopavo
ENSHBUG00000010742	si:ch73-63e15.2	76	67.756	ENSMAUG00000008034	Sbno2	86	68.299	Mesocricetus_auratus
ENSHBUG00000010742	si:ch73-63e15.2	77	67.836	ENSMICG00000013071	SBNO2	88	68.316	Microcebus_murinus
ENSHBUG00000010742	si:ch73-63e15.2	76	68.912	ENSMOCG00000010504	Sbno2	89	66.584	Microtus_ochrogaster
ENSHBUG00000010742	si:ch73-63e15.2	76	71.059	ENSMODG00000005382	SBNO2	89	66.588	Monodelphis_domestica
ENSHBUG00000010742	si:ch73-63e15.2	61	83.569	ENSMALG00000021831	si:ch73-63e15.2	99	83.569	Monopterus_albus
ENSHBUG00000010742	si:ch73-63e15.2	76	68.599	ENSMUSG00000035673	Sbno2	97	66.417	Mus_musculus
ENSHBUG00000010742	si:ch73-63e15.2	76	68.685	MGP_PahariEiJ_G0030976	Sbno2	89	66.309	Mus_pahari
ENSHBUG00000010742	si:ch73-63e15.2	76	68.685	MGP_SPRETEiJ_G0016381	Sbno2	95	66.334	Mus_spretus
ENSHBUG00000010742	si:ch73-63e15.2	65	71.501	ENSMPUG00000008747	SBNO2	99	66.758	Mustela_putorius_furo
ENSHBUG00000010742	si:ch73-63e15.2	76	68.253	ENSNGAG00000004308	Sbno2	86	68.080	Nannospalax_galili
ENSHBUG00000010742	si:ch73-63e15.2	81	97.479	ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	Neolamprologus_brichardi
ENSHBUG00000010742	si:ch73-63e15.2	73	68.794	ENSNLEG00000001305	SBNO2	89	68.794	Nomascus_leucogenys
ENSHBUG00000010742	si:ch73-63e15.2	62	67.197	ENSMEUG00000013511	-	78	66.879	Notamacropus_eugenii
ENSHBUG00000010742	si:ch73-63e15.2	75	68.039	ENSOPRG00000017238	SBNO2	93	68.932	Ochotona_princeps
ENSHBUG00000010742	si:ch73-63e15.2	76	67.301	ENSODEG00000011822	SBNO2	86	67.183	Octodon_degus
ENSHBUG00000010742	si:ch73-63e15.2	100	97.933	ENSONIG00000002490	si:ch73-63e15.2	100	97.785	Oreochromis_niloticus
ENSHBUG00000010742	si:ch73-63e15.2	100	78.341	ENSORLG00000000913	si:ch73-63e15.2	99	78.202	Oryzias_latipes
ENSHBUG00000010742	si:ch73-63e15.2	100	78.539	ENSORLG00020010978	si:ch73-63e15.2	100	77.398	Oryzias_latipes_hni
ENSHBUG00000010742	si:ch73-63e15.2	100	78.628	ENSORLG00015000202	si:ch73-63e15.2	100	77.485	Oryzias_latipes_hsok
ENSHBUG00000010742	si:ch73-63e15.2	100	77.632	ENSOMEG00000000359	si:ch73-63e15.2	100	76.627	Oryzias_melastigma
ENSHBUG00000010742	si:ch73-63e15.2	76	66.580	ENSOARG00000011130	SBNO2	86	66.580	Ovis_aries
ENSHBUG00000010742	si:ch73-63e15.2	76	67.526	ENSPPAG00000032482	SBNO2	90	67.700	Pan_paniscus
ENSHBUG00000010742	si:ch73-63e15.2	76	68.458	ENSPTRG00000010185	SBNO2	87	68.750	Pan_troglodytes
ENSHBUG00000010742	si:ch73-63e15.2	76	65.195	ENSPANG00000009658	SBNO2	87	65.248	Papio_anubis
ENSHBUG00000010742	si:ch73-63e15.2	68	78.711	ENSPKIG00000009707	-	84	78.834	Paramormyrops_kingsleyae
ENSHBUG00000010742	si:ch73-63e15.2	90	82.245	ENSPKIG00000024201	si:ch73-63e15.2	96	82.544	Paramormyrops_kingsleyae
ENSHBUG00000010742	si:ch73-63e15.2	64	73.476	ENSPSIG00000002852	SBNO2	99	73.272	Pelodiscus_sinensis
ENSHBUG00000010742	si:ch73-63e15.2	79	81.711	ENSPMGG00000014375	si:ch73-63e15.2	95	78.336	Periophthalmus_magnuspinnatus
ENSHBUG00000010742	si:ch73-63e15.2	76	66.898	ENSPEMG00000024122	Sbno2	89	64.184	Peromyscus_maniculatus_bairdii
ENSHBUG00000010742	si:ch73-63e15.2	76	70.751	ENSPCIG00000011264	SBNO2	89	67.504	Phascolarctos_cinereus
ENSHBUG00000010742	si:ch73-63e15.2	100	76.658	ENSPFOG00000004096	si:ch73-63e15.2	100	85.825	Poecilia_formosa
ENSHBUG00000010742	si:ch73-63e15.2	100	76.658	ENSPLAG00000014653	si:ch73-63e15.2	100	76.406	Poecilia_latipinna
ENSHBUG00000010742	si:ch73-63e15.2	100	76.321	ENSPMEG00000002129	si:ch73-63e15.2	96	82.718	Poecilia_mexicana
ENSHBUG00000010742	si:ch73-63e15.2	100	76.528	ENSPREG00000006755	si:ch73-63e15.2	100	75.741	Poecilia_reticulata
ENSHBUG00000010742	si:ch73-63e15.2	70	68.627	ENSPCAG00000012256	SBNO2	79	68.037	Procavia_capensis
ENSHBUG00000010742	si:ch73-63e15.2	77	62.361	ENSPCOG00000015216	SBNO2	90	60.096	Propithecus_coquereli
ENSHBUG00000010742	si:ch73-63e15.2	100	99.667	ENSPNYG00000019926	si:ch73-63e15.2	100	99.667	Pundamilia_nyererei
ENSHBUG00000010742	si:ch73-63e15.2	79	78.421	ENSPNAG00000026609	sbno2a	99	69.358	Pygocentrus_nattereri
ENSHBUG00000010742	si:ch73-63e15.2	82	78.180	ENSPNAG00000020260	si:ch73-63e15.2	89	77.858	Pygocentrus_nattereri
ENSHBUG00000010742	si:ch73-63e15.2	76	68.858	ENSRNOG00000013987	Sbno2	89	68.783	Rattus_norvegicus
ENSHBUG00000010742	si:ch73-63e15.2	70	67.136	ENSRBIG00000009740	SBNO2	86	67.684	Rhinopithecus_bieti
ENSHBUG00000010742	si:ch73-63e15.2	66	71.306	ENSRROG00000044671	SBNO2	85	71.306	Rhinopithecus_roxellana
ENSHBUG00000010742	si:ch73-63e15.2	76	68.024	ENSSBOG00000023562	SBNO2	88	67.941	Saimiri_boliviensis_boliviensis
ENSHBUG00000010742	si:ch73-63e15.2	75	70.844	ENSSHAG00000010241	SBNO2	98	70.583	Sarcophilus_harrisii
ENSHBUG00000010742	si:ch73-63e15.2	92	78.676	ENSSFOG00015005861	si:ch73-63e15.2	94	80.584	Scleropages_formosus
ENSHBUG00000010742	si:ch73-63e15.2	100	78.681	ENSSMAG00000012489	si:ch73-63e15.2	99	80.497	Scophthalmus_maximus
ENSHBUG00000010742	si:ch73-63e15.2	100	80.281	ENSSDUG00000003527	si:ch73-63e15.2	99	81.462	Seriola_dumerili
ENSHBUG00000010742	si:ch73-63e15.2	100	80.159	ENSSLDG00000004623	si:ch73-63e15.2	99	81.332	Seriola_lalandi_dorsalis
ENSHBUG00000010742	si:ch73-63e15.2	99	81.377	ENSSPAG00000017717	si:ch73-63e15.2	100	81.806	Stegastes_partitus
ENSHBUG00000010742	si:ch73-63e15.2	76	69.324	ENSSSCG00000030042	SBNO2	89	69.217	Sus_scrofa
ENSHBUG00000010742	si:ch73-63e15.2	73	87.986	ENSTRUG00000018193	si:ch73-63e15.2	86	88.472	Takifugu_rubripes
ENSHBUG00000010742	si:ch73-63e15.2	69	70.038	ENSUAMG00000006568	SBNO2	93	71.098	Ursus_americanus
ENSHBUG00000010742	si:ch73-63e15.2	76	69.784	ENSVVUG00000022823	SBNO2	82	69.524	Vulpes_vulpes
ENSHBUG00000010742	si:ch73-63e15.2	69	74.899	ENSXETG00000021579	sbno2	91	74.239	Xenopus_tropicalis
ENSHBUG00000010742	si:ch73-63e15.2	87	85.850	ENSXCOG00000009209	si:ch73-63e15.2	94	89.863	Xiphophorus_couchianus
ENSHBUG00000010742	si:ch73-63e15.2	100	76.743	ENSXMAG00000012091	si:ch73-63e15.2	89	88.605	Xiphophorus_maculatus