EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010846 (Gene tree)
Gene ID: 102307528
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 31613 bases
Position: chrJH425391.1:2190132-2221744
Accession: 102307528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027572	RRM_1	PF00076.22	0.00018	1	1
ENSHBUP00000009264	RRM_1	PF00076.22	0.00019	1	1
ENSHBUP00000009322	RRM_1	PF00076.22	0.00019	1	1
ENSHBUP00000009308	RRM_1	PF00076.22	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000540	-	4974	-	ENSHBUP00000009264	1657 (aa)	-	-
ENSHBUT00000000474	-	5010	XM_014334582	ENSHBUP00000009322	1669 (aa)	XP_014190068	-
ENSHBUT00000000461	-	5999	XM_005925496	ENSHBUP00000009308	1780 (aa)	XP_005925558	-
ENSHBUT00000000443	-	5431	XM_014334581	ENSHBUP00000027572	1569 (aa)	XP_014190067	-

Gene Model

Click here to download ENSHBUG00000010846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010846	tnrc6c1	100	54.305	ENSHBUG00000018310	tnrc6c2	98	54.494

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010846	tnrc6c1	98	53.474	ENSG00000078687	TNRC6C	100	47.566	Homo_sapiens
ENSHBUG00000010846	tnrc6c1	100	86.326	ENSAPOG00000019749	tnrc6c1	100	86.628	Acanthochromis_polyacanthus
ENSHBUG00000010846	tnrc6c1	98	52.294	ENSAMEG00000013756	TNRC6C	99	47.872	Ailuropoda_melanoleuca
ENSHBUG00000010846	tnrc6c1	100	88.372	ENSACIG00000008075	tnrc6c1	99	88.491	Amphilophus_citrinellus
ENSHBUG00000010846	tnrc6c1	100	86.569	ENSAOCG00000023968	tnrc6c1	100	86.987	Amphiprion_ocellaris
ENSHBUG00000010846	tnrc6c1	100	86.745	ENSAPEG00000009020	tnrc6c1	100	87.163	Amphiprion_percula
ENSHBUG00000010846	tnrc6c1	99	53.150	ENSAPLG00000005456	TNRC6C	99	45.992	Anas_platyrhynchos
ENSHBUG00000010846	tnrc6c1	99	49.655	ENSACAG00000016198	TNRC6C	96	46.577	Anolis_carolinensis
ENSHBUG00000010846	tnrc6c1	99	48.360	ENSANAG00000021554	TNRC6C	98	49.238	Aotus_nancymaae
ENSHBUG00000010846	tnrc6c1	100	98.562	ENSACLG00000000424	tnrc6c1	100	98.562	Astatotilapia_calliptera
ENSHBUG00000010846	tnrc6c1	97	52.490	ENSBTAG00000018658	TNRC6C	94	50.030	Bos_taurus
ENSHBUG00000010846	tnrc6c1	99	48.652	ENSCJAG00000019431	TNRC6C	98	49.072	Callithrix_jacchus
ENSHBUG00000010846	tnrc6c1	98	53.347	ENSCAFG00000005224	TNRC6C	97	46.112	Canis_familiaris
ENSHBUG00000010846	tnrc6c1	98	53.057	ENSCAFG00020006661	TNRC6C	97	49.901	Canis_lupus_dingo
ENSHBUG00000010846	tnrc6c1	98	53.010	ENSCHIG00000026004	TNRC6C	100	50.237	Capra_hircus
ENSHBUG00000010846	tnrc6c1	97	47.987	ENSTSYG00000005403	TNRC6C	100	49.944	Carlito_syrichta
ENSHBUG00000010846	tnrc6c1	94	49.854	ENSCAPG00000007307	TNRC6C	97	46.572	Cavia_aperea
ENSHBUG00000010846	tnrc6c1	94	53.829	ENSCPOG00000000467	TNRC6C	99	47.283	Cavia_porcellus
ENSHBUG00000010846	tnrc6c1	99	48.837	ENSCCAG00000030524	TNRC6C	100	48.047	Cebus_capucinus
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSCATG00000033135	TNRC6C	100	49.525	Cercocebus_atys
ENSHBUG00000010846	tnrc6c1	98	52.570	ENSCLAG00000011139	TNRC6C	97	47.487	Chinchilla_lanigera
ENSHBUG00000010846	tnrc6c1	99	48.832	ENSCSAG00000005167	TNRC6C	97	45.941	Chlorocebus_sabaeus
ENSHBUG00000010846	tnrc6c1	73	67.227	ENSCHOG00000000088	TNRC6C	65	66.387	Choloepus_hoffmanni
ENSHBUG00000010846	tnrc6c1	100	48.483	ENSCPBG00000027960	TNRC6C	100	48.447	Chrysemys_picta_bellii
ENSHBUG00000010846	tnrc6c1	85	51.970	ENSCANG00000041771	TNRC6C	100	49.553	Colobus_angolensis_palliatus
ENSHBUG00000010846	tnrc6c1	99	46.512	ENSCGRG00001022686	Tnrc6c	99	50.000	Cricetulus_griseus_chok1gshd
ENSHBUG00000010846	tnrc6c1	99	46.656	ENSCGRG00000018041	Tnrc6c	99	50.000	Cricetulus_griseus_crigri
ENSHBUG00000010846	tnrc6c1	100	77.799	ENSCSEG00000012744	tnrc6c1	100	75.771	Cynoglossus_semilaevis
ENSHBUG00000010846	tnrc6c1	94	74.461	ENSDARG00000076847	tnrc6c1	96	74.347	Danio_rerio
ENSHBUG00000010846	tnrc6c1	99	48.091	ENSDNOG00000003247	TNRC6C	97	46.181	Dasypus_novemcinctus
ENSHBUG00000010846	tnrc6c1	83	49.521	ENSDORG00000004558	Tnrc6c	95	48.325	Dipodomys_ordii
ENSHBUG00000010846	tnrc6c1	87	53.654	ENSETEG00000005527	TNRC6C	64	53.234	Echinops_telfairi
ENSHBUG00000010846	tnrc6c1	90	51.511	ENSEASG00005004799	TNRC6C	100	47.678	Equus_asinus_asinus
ENSHBUG00000010846	tnrc6c1	98	52.743	ENSECAG00000012486	TNRC6C	98	46.539	Equus_caballus
ENSHBUG00000010846	tnrc6c1	93	55.914	ENSEEUG00000010008	TNRC6C	94	52.304	Erinaceus_europaeus
ENSHBUG00000010846	tnrc6c1	99	51.869	ENSFCAG00000028358	TNRC6C	100	47.931	Felis_catus
ENSHBUG00000010846	tnrc6c1	89	53.924	ENSFALG00000000848	TNRC6C	100	49.317	Ficedula_albicollis
ENSHBUG00000010846	tnrc6c1	100	49.030	ENSFDAG00000010368	TNRC6C	95	51.401	Fukomys_damarensis
ENSHBUG00000010846	tnrc6c1	100	80.275	ENSFHEG00000002936	tnrc6c1	100	78.506	Fundulus_heteroclitus
ENSHBUG00000010846	tnrc6c1	96	56.148	ENSGALG00000001725	TNRC6C	100	49.551	Gallus_gallus
ENSHBUG00000010846	tnrc6c1	100	81.210	ENSGAFG00000019019	tnrc6c1	100	80.923	Gambusia_affinis
ENSHBUG00000010846	tnrc6c1	100	74.549	ENSGACG00000012320	tnrc6c1	98	73.932	Gasterosteus_aculeatus
ENSHBUG00000010846	tnrc6c1	100	49.946	ENSGAGG00000022043	TNRC6C	100	49.459	Gopherus_agassizii
ENSHBUG00000010846	tnrc6c1	98	53.189	ENSGGOG00000011304	TNRC6C	100	47.732	Gorilla_gorilla
ENSHBUG00000010846	tnrc6c1	98	51.852	ENSHGLG00000004809	TNRC6C	95	51.058	Heterocephalus_glaber_female
ENSHBUG00000010846	tnrc6c1	98	51.472	ENSHGLG00100012597	TNRC6C	95	50.644	Heterocephalus_glaber_male
ENSHBUG00000010846	tnrc6c1	100	62.094	ENSIPUG00000000818	tnrc6c1	98	60.680	Ictalurus_punctatus
ENSHBUG00000010846	tnrc6c1	97	52.856	ENSSTOG00000009101	TNRC6C	95	52.186	Ictidomys_tridecemlineatus
ENSHBUG00000010846	tnrc6c1	97	52.516	ENSJJAG00000017055	Tnrc6c	93	50.541	Jaculus_jaculus
ENSHBUG00000010846	tnrc6c1	100	75.405	ENSKMAG00000021023	tnrc6c1	100	74.922	Kryptolebias_marmoratus
ENSHBUG00000010846	tnrc6c1	69	66.667	ENSLACG00000015283	TNRC6C	95	66.480	Latimeria_chalumnae
ENSHBUG00000010846	tnrc6c1	100	74.746	ENSLOCG00000013377	tnrc6c1	94	75.181	Lepisosteus_oculatus
ENSHBUG00000010846	tnrc6c1	89	61.075	ENSLAFG00000011122	TNRC6C	98	60.753	Loxodonta_africana
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSMFAG00000043943	TNRC6C	100	49.525	Macaca_fascicularis
ENSHBUG00000010846	tnrc6c1	99	48.938	ENSMMUG00000011924	TNRC6C	100	48.183	Macaca_mulatta
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSMNEG00000030405	TNRC6C	100	48.183	Macaca_nemestrina
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSMLEG00000033436	TNRC6C	100	49.525	Mandrillus_leucophaeus
ENSHBUG00000010846	tnrc6c1	100	82.101	ENSMAMG00000023613	tnrc6c1	100	82.522	Mastacembelus_armatus
ENSHBUG00000010846	tnrc6c1	100	99.775	ENSMZEG00005010920	tnrc6c1	100	99.775	Maylandia_zebra
ENSHBUG00000010846	tnrc6c1	93	67.730	ENSMGAG00000003906	TNRC6C	91	67.376	Meleagris_gallopavo
ENSHBUG00000010846	tnrc6c1	90	50.785	ENSMAUG00000021618	Tnrc6c	94	47.901	Mesocricetus_auratus
ENSHBUG00000010846	tnrc6c1	100	47.862	ENSMICG00000003952	TNRC6C	100	49.582	Microcebus_murinus
ENSHBUG00000010846	tnrc6c1	98	50.749	ENSMOCG00000015879	Tnrc6c	96	50.721	Microtus_ochrogaster
ENSHBUG00000010846	tnrc6c1	100	79.975	ENSMMOG00000005203	tnrc6c1	100	80.470	Mola_mola
ENSHBUG00000010846	tnrc6c1	99	47.909	ENSMODG00000001785	TNRC6C	97	51.436	Monodelphis_domestica
ENSHBUG00000010846	tnrc6c1	99	51.012	MGP_CAROLIEiJ_G0017465	Tnrc6c	97	50.068	Mus_caroli
ENSHBUG00000010846	tnrc6c1	99	46.755	ENSMUSG00000025571	Tnrc6c	97	50.204	Mus_musculus
ENSHBUG00000010846	tnrc6c1	98	51.158	MGP_PahariEiJ_G0018593	Tnrc6c	97	50.068	Mus_pahari
ENSHBUG00000010846	tnrc6c1	99	46.544	MGP_SPRETEiJ_G0018309	Tnrc6c	97	50.000	Mus_spretus
ENSHBUG00000010846	tnrc6c1	99	52.736	ENSMPUG00000013348	TNRC6C	94	49.767	Mustela_putorius_furo
ENSHBUG00000010846	tnrc6c1	93	54.114	ENSMLUG00000014431	TNRC6C	96	45.360	Myotis_lucifugus
ENSHBUG00000010846	tnrc6c1	85	50.845	ENSNGAG00000012203	Tnrc6c	90	50.444	Nannospalax_galili
ENSHBUG00000010846	tnrc6c1	100	99.282	ENSNBRG00000005344	tnrc6c1	100	99.282	Neolamprologus_brichardi
ENSHBUG00000010846	tnrc6c1	99	47.540	ENSNLEG00000000047	TNRC6C	97	47.287	Nomascus_leucogenys
ENSHBUG00000010846	tnrc6c1	93	45.350	ENSMEUG00000005104	TNRC6C	96	65.324	Notamacropus_eugenii
ENSHBUG00000010846	tnrc6c1	99	52.793	ENSODEG00000012499	TNRC6C	97	51.544	Octodon_degus
ENSHBUG00000010846	tnrc6c1	100	98.281	ENSONIG00000002210	tnrc6c1	100	98.281	Oreochromis_niloticus
ENSHBUG00000010846	tnrc6c1	70	90.323	ENSOANG00000009758	-	60	54.920	Ornithorhynchus_anatinus
ENSHBUG00000010846	tnrc6c1	54	56.636	ENSOCUG00000006122	TNRC6C	87	55.215	Oryctolagus_cuniculus
ENSHBUG00000010846	tnrc6c1	100	76.779	ENSORLG00000009837	tnrc6c1	100	83.636	Oryzias_latipes
ENSHBUG00000010846	tnrc6c1	100	76.779	ENSORLG00020016510	tnrc6c1	100	77.604	Oryzias_latipes_hni
ENSHBUG00000010846	tnrc6c1	79	73.451	ENSORLG00015000171	tnrc6c1	97	74.131	Oryzias_latipes_hsok
ENSHBUG00000010846	tnrc6c1	100	78.152	ENSOMEG00000000357	tnrc6c1	100	78.332	Oryzias_melastigma
ENSHBUG00000010846	tnrc6c1	91	53.296	ENSOGAG00000007197	TNRC6C	100	49.021	Otolemur_garnettii
ENSHBUG00000010846	tnrc6c1	94	50.110	ENSOARG00000006041	TNRC6C	97	44.995	Ovis_aries
ENSHBUG00000010846	tnrc6c1	98	53.474	ENSPPAG00000027160	TNRC6C	100	47.677	Pan_paniscus
ENSHBUG00000010846	tnrc6c1	85	51.458	ENSPPRG00000018881	TNRC6C	98	51.062	Panthera_pardus
ENSHBUG00000010846	tnrc6c1	86	56.280	ENSPTIG00000008791	TNRC6C	87	54.621	Panthera_tigris_altaica
ENSHBUG00000010846	tnrc6c1	98	53.474	ENSPTRG00000009699	TNRC6C	100	47.677	Pan_troglodytes
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSPANG00000019994	TNRC6C	100	48.295	Papio_anubis
ENSHBUG00000010846	tnrc6c1	100	55.369	ENSPKIG00000005428	tnrc6c1	100	55.581	Paramormyrops_kingsleyae
ENSHBUG00000010846	tnrc6c1	96	53.476	ENSPSIG00000018069	TNRC6C	99	48.399	Pelodiscus_sinensis
ENSHBUG00000010846	tnrc6c1	84	79.365	ENSPMGG00000022911	tnrc6c1	98	80.723	Periophthalmus_magnuspinnatus
ENSHBUG00000010846	tnrc6c1	99	51.722	ENSPEMG00000009785	Tnrc6c	100	47.859	Peromyscus_maniculatus_bairdii
ENSHBUG00000010846	tnrc6c1	100	81.371	ENSPFOG00000012560	tnrc6c1	98	80.186	Poecilia_formosa
ENSHBUG00000010846	tnrc6c1	100	81.308	ENSPLAG00000021055	tnrc6c1	100	81.009	Poecilia_latipinna
ENSHBUG00000010846	tnrc6c1	98	53.767	ENSPPYG00000008679	TNRC6C	96	45.945	Pongo_abelii
ENSHBUG00000010846	tnrc6c1	84	61.822	ENSPCAG00000012510	TNRC6C	89	66.140	Procavia_capensis
ENSHBUG00000010846	tnrc6c1	100	48.255	ENSPCOG00000021451	TNRC6C	100	49.638	Propithecus_coquereli
ENSHBUG00000010846	tnrc6c1	87	66.949	ENSPVAG00000002008	TNRC6C	95	66.102	Pteropus_vampyrus
ENSHBUG00000010846	tnrc6c1	100	99.365	ENSPNYG00000014477	tnrc6c1	100	99.365	Pundamilia_nyererei
ENSHBUG00000010846	tnrc6c1	83	51.928	ENSRNOG00000022395	Tnrc6c	94	47.528	Rattus_norvegicus
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSRBIG00000027777	TNRC6C	100	47.802	Rhinopithecus_bieti
ENSHBUG00000010846	tnrc6c1	99	48.784	ENSRROG00000042912	TNRC6C	100	47.802	Rhinopithecus_roxellana
ENSHBUG00000010846	tnrc6c1	99	48.811	ENSSBOG00000023981	TNRC6C	100	49.553	Saimiri_boliviensis_boliviensis
ENSHBUG00000010846	tnrc6c1	53	65.635	ENSSHAG00000018330	-	99	64.839	Sarcophilus_harrisii
ENSHBUG00000010846	tnrc6c1	54	62.583	ENSSFOG00015004735	-	99	67.095	Scleropages_formosus
ENSHBUG00000010846	tnrc6c1	100	60.622	ENSSFOG00015006475	tnrc6c1	99	58.492	Scleropages_formosus
ENSHBUG00000010846	tnrc6c1	100	82.074	ENSSMAG00000012761	tnrc6c1	100	81.136	Scophthalmus_maximus
ENSHBUG00000010846	tnrc6c1	100	84.611	ENSSDUG00000002366	tnrc6c1	99	84.207	Seriola_dumerili
ENSHBUG00000010846	tnrc6c1	100	84.486	ENSSLDG00000025613	tnrc6c1	100	84.726	Seriola_lalandi_dorsalis
ENSHBUG00000010846	tnrc6c1	82	68.067	ENSSARG00000006816	TNRC6C	90	66.387	Sorex_araneus
ENSHBUG00000010846	tnrc6c1	78	55.714	ENSSPUG00000007341	TNRC6C	95	50.732	Sphenodon_punctatus
ENSHBUG00000010846	tnrc6c1	98	85.154	ENSSPAG00000014977	tnrc6c1	98	85.850	Stegastes_partitus
ENSHBUG00000010846	tnrc6c1	78	64.348	ENSSSCG00000034373	TNRC6C	81	69.120	Sus_scrofa
ENSHBUG00000010846	tnrc6c1	95	53.889	ENSTGUG00000007733	TNRC6C	99	48.459	Taeniopygia_guttata
ENSHBUG00000010846	tnrc6c1	100	77.715	ENSTRUG00000011685	tnrc6c1	99	76.733	Takifugu_rubripes
ENSHBUG00000010846	tnrc6c1	100	72.667	ENSTNIG00000005273	tnrc6c1	100	77.390	Tetraodon_nigroviridis
ENSHBUG00000010846	tnrc6c1	68	49.071	ENSTBEG00000005046	TNRC6C	100	47.556	Tupaia_belangeri
ENSHBUG00000010846	tnrc6c1	97	51.970	ENSTTRG00000010828	TNRC6C	99	47.946	Tursiops_truncatus
ENSHBUG00000010846	tnrc6c1	98	51.158	ENSUMAG00000013614	TNRC6C	98	48.202	Ursus_maritimus
ENSHBUG00000010846	tnrc6c1	51	54.932	ENSVPAG00000006765	-	98	49.358	Vicugna_pacos
ENSHBUG00000010846	tnrc6c1	96	53.074	ENSVVUG00000015268	TNRC6C	96	51.750	Vulpes_vulpes
ENSHBUG00000010846	tnrc6c1	90	49.080	ENSXETG00000019470	tnrc6c	94	47.207	Xenopus_tropicalis
ENSHBUG00000010846	tnrc6c1	100	81.503	ENSXMAG00000025971	tnrc6c1	100	81.234	Xiphophorus_maculatus