EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000010857 (Gene tree)
Gene ID: 102304839
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 49310 bases
Position: chrJH425715.1:128720-178029
Accession: 102304839
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027568	SHQ1	PF04925.15	4.5e-67	1	1
ENSHBUP00000027584	SHQ1	PF04925.15	4.5e-67	1	1
ENSHBUP00000009337	SHQ1	PF04925.15	4.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000421	-	4097	XM_005943842	ENSHBUP00000027584	601 (aa)	XP_005943904	UPI0003BD5DE9
ENSHBUT00000000429	-	3592	-	ENSHBUP00000009337	612 (aa)	-	UPI0003BC9AC4
ENSHBUT00000000436	-	4008	XM_005943841	ENSHBUP00000027568	601 (aa)	XP_005943903	UPI0003BD5DE9

Gene Model

Click here to download ENSHBUG00000010857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010857	shq1	68	61.151	ENSG00000144736	SHQ1	96	68.750	Homo_sapiens
ENSHBUG00000010857	shq1	100	77.905	ENSAPOG00000000397	shq1	100	77.578	Acanthochromis_polyacanthus
ENSHBUG00000010857	shq1	74	57.549	ENSAMEG00000015140	SHQ1	76	59.497	Ailuropoda_melanoleuca
ENSHBUG00000010857	shq1	100	84.934	ENSACIG00000021249	shq1	100	84.603	Amphilophus_citrinellus
ENSHBUG00000010857	shq1	100	78.339	ENSAOCG00000023311	shq1	100	78.013	Amphiprion_ocellaris
ENSHBUG00000010857	shq1	100	78.361	ENSAPEG00000021686	shq1	100	78.033	Amphiprion_percula
ENSHBUG00000010857	shq1	99	73.675	ENSATEG00000008475	shq1	99	73.841	Anabas_testudineus
ENSHBUG00000010857	shq1	73	57.333	ENSAPLG00000013926	SHQ1	87	57.906	Anas_platyrhynchos
ENSHBUG00000010857	shq1	70	61.485	ENSACAG00000014809	SHQ1	66	61.211	Anolis_carolinensis
ENSHBUG00000010857	shq1	79	57.350	ENSANAG00000029241	SHQ1	76	59.865	Aotus_nancymaae
ENSHBUG00000010857	shq1	78	41.365	ENSANAG00000030500	-	74	43.218	Aotus_nancymaae
ENSHBUG00000010857	shq1	100	99.003	ENSACLG00000023077	shq1	98	98.854	Astatotilapia_calliptera
ENSHBUG00000010857	shq1	80	58.621	ENSBTAG00000005436	SHQ1	76	60.268	Bos_taurus
ENSHBUG00000010857	shq1	68	60.671	ENSCJAG00000015131	SHQ1	76	59.865	Callithrix_jacchus
ENSHBUG00000010857	shq1	65	59.900	ENSCAFG00000006434	SHQ1	76	59.641	Canis_familiaris
ENSHBUG00000010857	shq1	65	60.150	ENSCAFG00020016743	SHQ1	76	59.865	Canis_lupus_dingo
ENSHBUG00000010857	shq1	94	52.659	ENSCHIG00000012271	SHQ1	90	52.740	Capra_hircus
ENSHBUG00000010857	shq1	68	57.385	ENSTSYG00000014439	SHQ1	77	56.659	Carlito_syrichta
ENSHBUG00000010857	shq1	86	46.490	ENSCAPG00000009343	SHQ1	71	54.593	Cavia_aperea
ENSHBUG00000010857	shq1	94	50.510	ENSCPOG00000011443	SHQ1	99	50.424	Cavia_porcellus
ENSHBUG00000010857	shq1	78	43.191	ENSCCAG00000036087	-	74	44.573	Cebus_capucinus
ENSHBUG00000010857	shq1	68	52.885	ENSCCAG00000027080	SHQ1	75	51.121	Cebus_capucinus
ENSHBUG00000010857	shq1	68	61.871	ENSCATG00000041238	SHQ1	76	60.987	Cercocebus_atys
ENSHBUG00000010857	shq1	73	59.101	ENSCLAG00000004206	SHQ1	75	59.817	Chinchilla_lanigera
ENSHBUG00000010857	shq1	53	59.756	ENSCSAG00000011514	SHQ1	72	58.824	Chlorocebus_sabaeus
ENSHBUG00000010857	shq1	99	48.953	ENSCPBG00000006441	SHQ1	71	59.729	Chrysemys_picta_bellii
ENSHBUG00000010857	shq1	65	42.386	ENSCING00000008013	-	97	40.498	Ciona_intestinalis
ENSHBUG00000010857	shq1	65	40.051	ENSCSAVG00000002332	-	99	39.540	Ciona_savignyi
ENSHBUG00000010857	shq1	81	55.138	ENSCANG00000039295	SHQ1	77	60.538	Colobus_angolensis_palliatus
ENSHBUG00000010857	shq1	73	58.744	ENSCGRG00001012583	Shq1	78	57.978	Cricetulus_griseus_chok1gshd
ENSHBUG00000010857	shq1	73	58.744	ENSCGRG00000009849	Shq1	78	57.978	Cricetulus_griseus_crigri
ENSHBUG00000010857	shq1	98	69.622	ENSCSEG00000007829	shq1	98	69.622	Cynoglossus_semilaevis
ENSHBUG00000010857	shq1	99	70.067	ENSCVAG00000020049	shq1	99	71.141	Cyprinodon_variegatus
ENSHBUG00000010857	shq1	98	54.139	ENSDARG00000058522	shq1	98	52.827	Danio_rerio
ENSHBUG00000010857	shq1	92	52.105	ENSDNOG00000033937	SHQ1	75	60.502	Dasypus_novemcinctus
ENSHBUG00000010857	shq1	68	53.957	ENSETEG00000005766	SHQ1	76	52.968	Echinops_telfairi
ENSHBUG00000010857	shq1	61	47.861	ENSEBUG00000005445	shq1	79	48.580	Eptatretus_burgeri
ENSHBUG00000010857	shq1	73	60.134	ENSEASG00005002237	SHQ1	76	60.449	Equus_asinus_asinus
ENSHBUG00000010857	shq1	73	60.134	ENSECAG00000015673	SHQ1	75	60.449	Equus_caballus
ENSHBUG00000010857	shq1	72	60.722	ENSEEUG00000010568	SHQ1	76	60.811	Erinaceus_europaeus
ENSHBUG00000010857	shq1	98	61.111	ENSELUG00000003476	shq1	99	60.720	Esox_lucius
ENSHBUG00000010857	shq1	80	56.680	ENSFCAG00000012781	SHQ1	77	60.135	Felis_catus
ENSHBUG00000010857	shq1	99	50.874	ENSFALG00000013428	SHQ1	72	62.500	Ficedula_albicollis
ENSHBUG00000010857	shq1	68	59.472	ENSFDAG00000005595	SHQ1	68	58.427	Fukomys_damarensis
ENSHBUG00000010857	shq1	98	70.034	ENSFHEG00000017552	shq1	100	69.865	Fundulus_heteroclitus
ENSHBUG00000010857	shq1	65	75.835	ENSGMOG00000007350	shq1	100	75.321	Gadus_morhua
ENSHBUG00000010857	shq1	99	48.706	ENSGALG00000007798	SHQ1	71	60.321	Gallus_gallus
ENSHBUG00000010857	shq1	65	80.463	ENSGACG00000011797	shq1	100	80.206	Gasterosteus_aculeatus
ENSHBUG00000010857	shq1	68	61.151	ENSGGOG00000034818	SHQ1	76	60.314	Gorilla_gorilla
ENSHBUG00000010857	shq1	92	50.000	ENSHGLG00000003637	SHQ1	68	59.589	Heterocephalus_glaber_female
ENSHBUG00000010857	shq1	91	51.541	ENSHGLG00100011957	SHQ1	68	59.589	Heterocephalus_glaber_male
ENSHBUG00000010857	shq1	99	63.987	ENSHCOG00000010799	shq1	99	63.591	Hippocampus_comes
ENSHBUG00000010857	shq1	94	56.162	ENSIPUG00000001247	shq1	92	56.239	Ictalurus_punctatus
ENSHBUG00000010857	shq1	68	59.189	ENSSTOG00000010043	SHQ1	81	57.399	Ictidomys_tridecemlineatus
ENSHBUG00000010857	shq1	68	60.337	ENSJJAG00000017611	Shq1	76	59.954	Jaculus_jaculus
ENSHBUG00000010857	shq1	100	71.689	ENSKMAG00000004457	shq1	100	71.523	Kryptolebias_marmoratus
ENSHBUG00000010857	shq1	72	63.039	ENSLACG00000014243	SHQ1	66	63.039	Latimeria_chalumnae
ENSHBUG00000010857	shq1	99	56.132	ENSLOCG00000009970	shq1	99	56.132	Lepisosteus_oculatus
ENSHBUG00000010857	shq1	68	43.269	ENSMFAG00000037396	-	74	42.825	Macaca_fascicularis
ENSHBUG00000010857	shq1	68	61.631	ENSMFAG00000039148	SHQ1	76	60.762	Macaca_fascicularis
ENSHBUG00000010857	shq1	60	60.705	ENSMMUG00000009571	SHQ1	71	59.799	Macaca_mulatta
ENSHBUG00000010857	shq1	68	43.198	ENSMMUG00000021761	-	74	42.825	Macaca_mulatta
ENSHBUG00000010857	shq1	68	61.631	ENSMNEG00000032667	SHQ1	76	60.762	Macaca_nemestrina
ENSHBUG00000010857	shq1	68	61.631	ENSMLEG00000038493	SHQ1	76	60.762	Mandrillus_leucophaeus
ENSHBUG00000010857	shq1	99	76.144	ENSMAMG00000023432	shq1	97	74.960	Mastacembelus_armatus
ENSHBUG00000010857	shq1	100	99.168	ENSMZEG00005008649	shq1	100	99.168	Maylandia_zebra
ENSHBUG00000010857	shq1	73	59.152	ENSMGAG00000009640	SHQ1	72	60.183	Meleagris_gallopavo
ENSHBUG00000010857	shq1	73	58.969	ENSMAUG00000022030	Shq1	78	58.202	Mesocricetus_auratus
ENSHBUG00000010857	shq1	88	48.524	ENSMICG00000009224	SHQ1	76	59.417	Microcebus_murinus
ENSHBUG00000010857	shq1	78	57.796	ENSMOCG00000017836	Shq1	78	58.296	Microtus_ochrogaster
ENSHBUG00000010857	shq1	98	69.115	ENSMMOG00000010569	shq1	99	68.948	Mola_mola
ENSHBUG00000010857	shq1	78	56.122	ENSMODG00000003926	SHQ1	78	59.361	Monodelphis_domestica
ENSHBUG00000010857	shq1	99	74.793	ENSMALG00000008870	shq1	99	74.461	Monopterus_albus
ENSHBUG00000010857	shq1	78	56.458	MGP_CAROLIEiJ_G0028689	Shq1	78	57.753	Mus_caroli
ENSHBUG00000010857	shq1	78	56.250	ENSMUSG00000035378	Shq1	78	57.753	Mus_musculus
ENSHBUG00000010857	shq1	74	57.709	MGP_PahariEiJ_G0022440	Shq1	78	58.072	Mus_pahari
ENSHBUG00000010857	shq1	78	56.458	MGP_SPRETEiJ_G0029717	Shq1	78	57.978	Mus_spretus
ENSHBUG00000010857	shq1	92	51.499	ENSMPUG00000017006	SHQ1	75	59.326	Mustela_putorius_furo
ENSHBUG00000010857	shq1	86	49.720	ENSMLUG00000013539	SHQ1	77	57.282	Myotis_lucifugus
ENSHBUG00000010857	shq1	78	48.945	ENSNGAG00000023317	Shq1	77	52.045	Nannospalax_galili
ENSHBUG00000010857	shq1	85	98.633	ENSNBRG00000024004	shq1	100	98.633	Neolamprologus_brichardi
ENSHBUG00000010857	shq1	79	56.883	ENSNLEG00000002731	SHQ1	76	60.538	Nomascus_leucogenys
ENSHBUG00000010857	shq1	68	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSHBUG00000010857	shq1	74	59.121	ENSODEG00000009192	SHQ1	81	60.090	Octodon_degus
ENSHBUG00000010857	shq1	99	97.671	ENSONIG00000020264	shq1	100	97.671	Oreochromis_niloticus
ENSHBUG00000010857	shq1	95	51.695	ENSOCUG00000016695	SHQ1	76	60.538	Oryctolagus_cuniculus
ENSHBUG00000010857	shq1	99	65.101	ENSORLG00000023538	shq1	99	64.430	Oryzias_latipes
ENSHBUG00000010857	shq1	99	65.825	ENSORLG00020003697	shq1	99	65.152	Oryzias_latipes_hni
ENSHBUG00000010857	shq1	99	64.597	ENSORLG00015021040	shq1	99	64.094	Oryzias_latipes_hsok
ENSHBUG00000010857	shq1	95	67.535	ENSOMEG00000001225	shq1	97	67.247	Oryzias_melastigma
ENSHBUG00000010857	shq1	78	56.965	ENSOGAG00000003898	SHQ1	78	59.688	Otolemur_garnettii
ENSHBUG00000010857	shq1	68	60.859	ENSOARG00000009547	SHQ1	76	60.090	Ovis_aries
ENSHBUG00000010857	shq1	79	41.822	ENSPPAG00000043263	-	73	43.218	Pan_paniscus
ENSHBUG00000010857	shq1	68	61.391	ENSPPAG00000027714	SHQ1	76	60.538	Pan_paniscus
ENSHBUG00000010857	shq1	94	50.761	ENSPPRG00000004769	SHQ1	76	60.135	Panthera_pardus
ENSHBUG00000010857	shq1	94	48.294	ENSPTIG00000011478	SHQ1	75	56.849	Panthera_tigris_altaica
ENSHBUG00000010857	shq1	79	40.871	ENSPTRG00000048303	-	73	42.166	Pan_troglodytes
ENSHBUG00000010857	shq1	68	61.391	ENSPTRG00000015106	SHQ1	76	60.538	Pan_troglodytes
ENSHBUG00000010857	shq1	68	60.817	ENSPANG00000002881	SHQ1	76	60.987	Papio_anubis
ENSHBUG00000010857	shq1	99	56.406	ENSPKIG00000021517	shq1	75	67.667	Paramormyrops_kingsleyae
ENSHBUG00000010857	shq1	72	59.318	ENSPSIG00000005536	SHQ1	72	59.955	Pelodiscus_sinensis
ENSHBUG00000010857	shq1	99	60.906	ENSPMGG00000008838	shq1	100	59.701	Periophthalmus_magnuspinnatus
ENSHBUG00000010857	shq1	65	60.500	ENSPEMG00000000251	Shq1	76	58.352	Peromyscus_maniculatus_bairdii
ENSHBUG00000010857	shq1	72	58.503	ENSPMAG00000005372	shq1	99	58.050	Petromyzon_marinus
ENSHBUG00000010857	shq1	92	67.690	ENSPFOG00000003118	shq1	99	68.468	Poecilia_formosa
ENSHBUG00000010857	shq1	77	66.523	ENSPMEG00000011076	shq1	98	67.160	Poecilia_mexicana
ENSHBUG00000010857	shq1	83	67.066	ENSPREG00000000591	shq1	92	67.331	Poecilia_reticulata
ENSHBUG00000010857	shq1	79	56.701	ENSPPYG00000013717	SHQ1	76	60.314	Pongo_abelii
ENSHBUG00000010857	shq1	68	60.952	ENSPCAG00000009035	SHQ1	77	60.314	Procavia_capensis
ENSHBUG00000010857	shq1	68	61.391	ENSPCOG00000008415	SHQ1	76	60.538	Propithecus_coquereli
ENSHBUG00000010857	shq1	92	51.652	ENSPVAG00000017392	SHQ1	77	60.000	Pteropus_vampyrus
ENSHBUG00000010857	shq1	100	99.003	ENSPNYG00000003878	shq1	100	99.003	Pundamilia_nyererei
ENSHBUG00000010857	shq1	98	57.002	ENSPNAG00000026840	shq1	99	57.003	Pygocentrus_nattereri
ENSHBUG00000010857	shq1	73	59.152	ENSRNOG00000005433	Shq1	73	58.427	Rattus_norvegicus
ENSHBUG00000010857	shq1	81	53.507	ENSRBIG00000026280	SHQ1	76	58.998	Rhinopithecus_bieti
ENSHBUG00000010857	shq1	81	55.534	ENSRROG00000034126	SHQ1	77	61.211	Rhinopithecus_roxellana
ENSHBUG00000010857	shq1	68	54.327	ENSSBOG00000021038	SHQ1	74	53.708	Saimiri_boliviensis_boliviensis
ENSHBUG00000010857	shq1	71	60.502	ENSSHAG00000015077	SHQ1	77	60.271	Sarcophilus_harrisii
ENSHBUG00000010857	shq1	99	58.992	ENSSFOG00015016241	shq1	99	59.160	Scleropages_formosus
ENSHBUG00000010857	shq1	99	74.129	ENSSMAG00000016151	shq1	99	73.632	Scophthalmus_maximus
ENSHBUG00000010857	shq1	99	75.413	ENSSDUG00000011986	shq1	99	75.743	Seriola_dumerili
ENSHBUG00000010857	shq1	99	74.545	ENSSLDG00000013908	shq1	99	74.711	Seriola_lalandi_dorsalis
ENSHBUG00000010857	shq1	56	58.017	ENSSARG00000007119	SHQ1	77	50.226	Sorex_araneus
ENSHBUG00000010857	shq1	85	47.866	ENSSPUG00000011526	-	65	59.259	Sphenodon_punctatus
ENSHBUG00000010857	shq1	80	57.347	ENSSSCG00000011518	SHQ1	76	60.407	Sus_scrofa
ENSHBUG00000010857	shq1	68	62.619	ENSTGUG00000009933	SHQ1	76	61.883	Taeniopygia_guttata
ENSHBUG00000010857	shq1	98	66.162	ENSTRUG00000009446	shq1	99	66.835	Takifugu_rubripes
ENSHBUG00000010857	shq1	77	69.658	ENSTNIG00000007354	shq1	96	72.936	Tetraodon_nigroviridis
ENSHBUG00000010857	shq1	72	59.594	ENSTTRG00000005320	SHQ1	76	59.685	Tursiops_truncatus
ENSHBUG00000010857	shq1	93	50.432	ENSUMAG00000024031	SHQ1	76	59.039	Ursus_maritimus
ENSHBUG00000010857	shq1	69	50.346	ENSVPAG00000004880	SHQ1	59	60.635	Vicugna_pacos
ENSHBUG00000010857	shq1	92	51.585	ENSVVUG00000013906	SHQ1	76	59.417	Vulpes_vulpes
ENSHBUG00000010857	shq1	99	49.191	ENSXETG00000032215	shq1	99	49.271	Xenopus_tropicalis