EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000010964 (Gene tree)
Gene ID: 102311095
Gene Symbol: rabl2
Alias: si:dkeyp-1h4.2
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 6769 bases
Position: chrJH425488.1:72626-79394
Accession: 102311095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027639	MMR_HSR1	PF01926.23	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000289	-	3409	XM_005934123	ENSHBUP00000027639	222 (aa)	XP_005934185	UPI0003AF47F1
ENSHBUT00000000309	-	459	-	ENSHBUP00000027626	152 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000010964's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000010964's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000010964	rabl2	71	34.756	ENSHBUG00000002014	rab5c	73	34.756
ENSHBUG00000010964	rabl2	68	32.278	ENSHBUG00000015126	rab42a	59	32.278
ENSHBUG00000010964	rabl2	55	34.109	ENSHBUG00000014023	si:dkey-13a21.4	63	34.109
ENSHBUG00000010964	rabl2	74	32.738	ENSHBUG00000006056	-	78	32.738
ENSHBUG00000010964	rabl2	70	31.707	ENSHBUG00000013570	-	76	31.707
ENSHBUG00000010964	rabl2	74	30.114	ENSHBUG00000003434	rab22a	72	30.114
ENSHBUG00000010964	rabl2	68	30.519	ENSHBUG00000014338	RAB41	73	30.519
ENSHBUG00000010964	rabl2	71	31.902	ENSHBUG00000008497	rab12	67	31.902
ENSHBUG00000010964	rabl2	71	31.325	ENSHBUG00000022669	rab9a	82	31.325
ENSHBUG00000010964	rabl2	68	33.962	ENSHBUG00000002397	-	74	33.962
ENSHBUG00000010964	rabl2	65	32.000	ENSHBUG00000017620	-	69	32.000
ENSHBUG00000010964	rabl2	69	35.032	ENSHBUG00000009333	rab11al	73	35.032
ENSHBUG00000010964	rabl2	74	31.792	ENSHBUG00000003728	-	86	31.792
ENSHBUG00000010964	rabl2	64	30.612	ENSHBUG00000013162	rab33ba	71	30.612
ENSHBUG00000010964	rabl2	71	31.928	ENSHBUG00000001595	rab9b	75	31.928
ENSHBUG00000010964	rabl2	72	36.585	ENSHBUG00000003696	rab18b	80	36.585
ENSHBUG00000010964	rabl2	79	33.520	ENSHBUG00000001518	rab18a	86	33.520
ENSHBUG00000010964	rabl2	71	34.161	ENSHBUG00000003752	rab5aa	75	34.161
ENSHBUG00000010964	rabl2	64	32.450	ENSHBUG00000001714	-	63	32.450
ENSHBUG00000010964	rabl2	74	32.738	ENSHBUG00000022562	-	78	32.738
ENSHBUG00000010964	rabl2	72	32.335	ENSHBUG00000010852	RAB7A	81	32.335
ENSHBUG00000010964	rabl2	75	31.034	ENSHBUG00000009027	-	83	31.034
ENSHBUG00000010964	rabl2	83	32.292	ENSHBUG00000006823	-	84	32.292
ENSHBUG00000010964	rabl2	76	30.460	ENSHBUG00000019261	si:dkey-16l2.16	83	30.460
ENSHBUG00000010964	rabl2	78	31.844	ENSHBUG00000000993	rab30	82	31.844
ENSHBUG00000010964	rabl2	68	30.769	ENSHBUG00000000890	rab6a	74	30.769
ENSHBUG00000010964	rabl2	74	30.588	ENSHBUG00000003539	RAB39B	80	30.588
ENSHBUG00000010964	rabl2	69	33.758	ENSHBUG00000003876	rab25a	75	33.758
ENSHBUG00000010964	rabl2	73	36.905	ENSHBUG00000014777	rab11bb	77	36.905
ENSHBUG00000010964	rabl2	73	36.905	ENSHBUG00000009947	-	77	36.905
ENSHBUG00000010964	rabl2	70	36.250	ENSHBUG00000010304	rab1ab	79	36.250
ENSHBUG00000010964	rabl2	73	36.471	ENSHBUG00000023035	rab11a	74	36.471
ENSHBUG00000010964	rabl2	69	34.375	ENSHBUG00000009320	rab25b	79	33.962
ENSHBUG00000010964	rabl2	72	32.335	ENSHBUG00000009014	-	81	32.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000010964	rabl2	92	77.073	ENSG00000144134	RABL2A	98	81.818	Homo_sapiens
ENSHBUG00000010964	rabl2	92	77.073	ENSG00000079974	RABL2B	100	80.808	Homo_sapiens
ENSHBUG00000010964	rabl2	99	93.243	ENSAPOG00000023708	rabl2	99	93.243	Acanthochromis_polyacanthus
ENSHBUG00000010964	rabl2	99	73.991	ENSAMEG00000003173	-	99	73.991	Ailuropoda_melanoleuca
ENSHBUG00000010964	rabl2	99	95.023	ENSACIG00000000670	rabl2	99	95.023	Amphilophus_citrinellus
ENSHBUG00000010964	rabl2	99	92.793	ENSAOCG00000008069	rabl2	99	92.793	Amphiprion_ocellaris
ENSHBUG00000010964	rabl2	99	92.793	ENSAPEG00000003164	rabl2	99	92.793	Amphiprion_percula
ENSHBUG00000010964	rabl2	99	92.793	ENSATEG00000001111	rabl2	100	92.793	Anabas_testudineus
ENSHBUG00000010964	rabl2	74	83.537	ENSACAG00000000418	-	93	83.537	Anolis_carolinensis
ENSHBUG00000010964	rabl2	99	73.182	ENSANAG00000021001	-	96	73.182	Aotus_nancymaae
ENSHBUG00000010964	rabl2	100	99.550	ENSACLG00000025632	rabl2	100	99.550	Astatotilapia_calliptera
ENSHBUG00000010964	rabl2	95	81.132	ENSAMXG00000040611	rabl2	96	81.132	Astyanax_mexicanus
ENSHBUG00000010964	rabl2	91	77.833	ENSBTAG00000004876	RABL2B	96	74.886	Bos_taurus
ENSHBUG00000010964	rabl2	88	79.592	ENSCJAG00000018414	-	86	79.592	Callithrix_jacchus
ENSHBUG00000010964	rabl2	99	74.661	ENSCAFG00020006938	-	99	74.661	Canis_lupus_dingo
ENSHBUG00000010964	rabl2	91	77.340	ENSCHIG00000000591	-	92	75.472	Capra_hircus
ENSHBUG00000010964	rabl2	88	78.061	ENSTSYG00000004323	-	86	78.061	Carlito_syrichta
ENSHBUG00000010964	rabl2	96	74.884	ENSCPOG00000026899	-	97	74.884	Cavia_porcellus
ENSHBUG00000010964	rabl2	99	74.545	ENSCCAG00000025944	-	96	74.545	Cebus_capucinus
ENSHBUG00000010964	rabl2	99	73.182	ENSCATG00000034307	-	96	73.182	Cercocebus_atys
ENSHBUG00000010964	rabl2	95	76.303	ENSCLAG00000017218	-	95	76.303	Chinchilla_lanigera
ENSHBUG00000010964	rabl2	99	72.052	ENSCSAG00000004698	-	99	72.052	Chlorocebus_sabaeus
ENSHBUG00000010964	rabl2	99	75.225	ENSCPBG00000011715	-	99	75.225	Chrysemys_picta_bellii
ENSHBUG00000010964	rabl2	84	68.817	ENSCING00000004961	-	87	68.817	Ciona_intestinalis
ENSHBUG00000010964	rabl2	91	65.854	ENSCSAVG00000006042	-	98	65.854	Ciona_savignyi
ENSHBUG00000010964	rabl2	99	72.273	ENSCANG00000030879	-	96	72.273	Colobus_angolensis_palliatus
ENSHBUG00000010964	rabl2	99	72.523	ENSCGRG00001021894	Rabl2	99	72.523	Cricetulus_griseus_chok1gshd
ENSHBUG00000010964	rabl2	91	91.133	ENSCSEG00000005479	rabl2	97	87.156	Cynoglossus_semilaevis
ENSHBUG00000010964	rabl2	98	88.018	ENSCVAG00000011432	rabl2	99	88.018	Cyprinodon_variegatus
ENSHBUG00000010964	rabl2	95	79.048	ENSDARG00000063321	rabl2	96	79.048	Danio_rerio
ENSHBUG00000010964	rabl2	99	75.342	ENSDNOG00000035151	-	99	75.342	Dasypus_novemcinctus
ENSHBUG00000010964	rabl2	99	74.091	ENSDORG00000000003	Rabl2	99	74.091	Dipodomys_ordii
ENSHBUG00000010964	rabl2	99	75.113	ENSEASG00005008239	-	99	75.113	Equus_asinus_asinus
ENSHBUG00000010964	rabl2	99	75.113	ENSECAG00000026942	-	99	75.113	Equus_caballus
ENSHBUG00000010964	rabl2	99	73.423	ENSFCAG00000033642	-	99	73.423	Felis_catus
ENSHBUG00000010964	rabl2	92	76.585	ENSFDAG00000002113	-	92	76.585	Fukomys_damarensis
ENSHBUG00000010964	rabl2	96	90.233	ENSFHEG00000015015	rabl2	81	90.233	Fundulus_heteroclitus
ENSHBUG00000010964	rabl2	89	87.817	ENSGMOG00000018928	rabl2	100	87.817	Gadus_morhua
ENSHBUG00000010964	rabl2	91	77.340	ENSGALG00000032458	RABL2B	91	77.340	Gallus_gallus
ENSHBUG00000010964	rabl2	99	86.036	ENSGAFG00000005188	rabl2	99	86.486	Gambusia_affinis
ENSHBUG00000010964	rabl2	100	87.444	ENSGACG00000012474	rabl2	100	87.783	Gasterosteus_aculeatus
ENSHBUG00000010964	rabl2	99	73.094	ENSHGLG00000005750	-	99	73.094	Heterocephalus_glaber_female
ENSHBUG00000010964	rabl2	99	73.094	ENSHGLG00100016281	-	99	73.094	Heterocephalus_glaber_male
ENSHBUG00000010964	rabl2	99	74.091	ENSSTOG00000002723	-	99	74.091	Ictidomys_tridecemlineatus
ENSHBUG00000010964	rabl2	99	71.171	ENSJJAG00000010792	Rabl2	99	71.171	Jaculus_jaculus
ENSHBUG00000010964	rabl2	99	90.090	ENSKMAG00000012723	rabl2	99	90.090	Kryptolebias_marmoratus
ENSHBUG00000010964	rabl2	99	89.640	ENSLBEG00000003644	rabl2	99	89.640	Labrus_bergylta
ENSHBUG00000010964	rabl2	95	79.245	ENSLACG00000003722	rabl2	95	79.245	Latimeria_chalumnae
ENSHBUG00000010964	rabl2	93	83.092	ENSLOCG00000016767	rabl2	92	83.092	Lepisosteus_oculatus
ENSHBUG00000010964	rabl2	99	73.636	ENSMFAG00000044775	-	96	73.636	Macaca_fascicularis
ENSHBUG00000010964	rabl2	99	73.636	ENSMMUG00000022914	RABL2B	96	73.636	Macaca_mulatta
ENSHBUG00000010964	rabl2	99	71.806	ENSMNEG00000028460	-	99	71.806	Macaca_nemestrina
ENSHBUG00000010964	rabl2	99	72.273	ENSMLEG00000032621	-	96	72.273	Mandrillus_leucophaeus
ENSHBUG00000010964	rabl2	99	90.991	ENSMAMG00000008168	rabl2	99	90.991	Mastacembelus_armatus
ENSHBUG00000010964	rabl2	100	96.847	ENSMZEG00005019758	rabl2	100	96.847	Maylandia_zebra
ENSHBUG00000010964	rabl2	99	71.622	ENSMAUG00000010955	Rabl2	100	71.622	Mesocricetus_auratus
ENSHBUG00000010964	rabl2	99	75.113	ENSMICG00000031301	-	96	75.113	Microcebus_murinus
ENSHBUG00000010964	rabl2	99	71.171	ENSMOCG00000002775	Rabl2	99	71.171	Microtus_ochrogaster
ENSHBUG00000010964	rabl2	93	78.641	ENSMODG00000010838	-	94	78.641	Monodelphis_domestica
ENSHBUG00000010964	rabl2	100	90.135	ENSMALG00000005944	rabl2	100	90.135	Monopterus_albus
ENSHBUG00000010964	rabl2	99	72.273	MGP_CAROLIEiJ_G0020176	Rabl2	97	72.273	Mus_caroli
ENSHBUG00000010964	rabl2	99	71.171	ENSMUSG00000022621	Rabl2	99	71.171	Mus_musculus
ENSHBUG00000010964	rabl2	99	72.273	MGP_PahariEiJ_G0020181	Rabl2	99	72.273	Mus_pahari
ENSHBUG00000010964	rabl2	99	71.818	MGP_SPRETEiJ_G0021073	Rabl2	99	71.818	Mus_spretus
ENSHBUG00000010964	rabl2	99	72.523	ENSMPUG00000001806	-	99	72.523	Mustela_putorius_furo
ENSHBUG00000010964	rabl2	95	73.113	ENSNGAG00000012843	Rabl2	92	73.113	Nannospalax_galili
ENSHBUG00000010964	rabl2	100	99.550	ENSNBRG00000000489	rabl2	100	99.550	Neolamprologus_brichardi
ENSHBUG00000010964	rabl2	99	73.303	ENSNLEG00000030435	-	96	73.303	Nomascus_leucogenys
ENSHBUG00000010964	rabl2	92	77.073	ENSODEG00000015650	-	92	77.073	Octodon_degus
ENSHBUG00000010964	rabl2	100	99.099	ENSONIG00000014885	rabl2	100	99.099	Oreochromis_niloticus
ENSHBUG00000010964	rabl2	100	82.883	ENSORLG00000009874	rabl2	98	82.883	Oryzias_latipes
ENSHBUG00000010964	rabl2	100	82.883	ENSORLG00020001721	rabl2	98	82.883	Oryzias_latipes_hni
ENSHBUG00000010964	rabl2	100	82.432	ENSORLG00015014268	rabl2	98	82.432	Oryzias_latipes_hsok
ENSHBUG00000010964	rabl2	98	84.862	ENSOMEG00000008576	rabl2	100	84.862	Oryzias_melastigma
ENSHBUG00000010964	rabl2	99	75.566	ENSOGAG00000009123	-	96	75.566	Otolemur_garnettii
ENSHBUG00000010964	rabl2	92	76.812	ENSPPRG00000014642	-	91	76.812	Panthera_pardus
ENSHBUG00000010964	rabl2	99	73.423	ENSPTIG00000018747	-	99	73.423	Panthera_tigris_altaica
ENSHBUG00000010964	rabl2	99	69.432	ENSPTRG00000014555	-	96	69.432	Pan_troglodytes
ENSHBUG00000010964	rabl2	99	69.565	ENSPANG00000036121	-	96	69.565	Papio_anubis
ENSHBUG00000010964	rabl2	96	79.439	ENSPKIG00000025372	rabl2	96	79.439	Paramormyrops_kingsleyae
ENSHBUG00000010964	rabl2	96	75.587	ENSPSIG00000014041	-	95	75.587	Pelodiscus_sinensis
ENSHBUG00000010964	rabl2	89	84.772	ENSPMGG00000012946	rabl2	96	84.772	Periophthalmus_magnuspinnatus
ENSHBUG00000010964	rabl2	99	72.523	ENSPEMG00000024045	Rabl2	99	72.523	Peromyscus_maniculatus_bairdii
ENSHBUG00000010964	rabl2	88	80.612	ENSPCIG00000012436	-	83	79.310	Phascolarctos_cinereus
ENSHBUG00000010964	rabl2	99	86.547	ENSPFOG00000017960	rabl2	99	86.547	Poecilia_formosa
ENSHBUG00000010964	rabl2	99	87.330	ENSPLAG00000015685	rabl2	99	87.330	Poecilia_latipinna
ENSHBUG00000010964	rabl2	99	87.330	ENSPMEG00000004703	rabl2	99	87.330	Poecilia_mexicana
ENSHBUG00000010964	rabl2	89	88.832	ENSPREG00000014761	rabl2	96	88.832	Poecilia_reticulata
ENSHBUG00000010964	rabl2	88	80.102	ENSPPYG00000012000	-	86	80.102	Pongo_abelii
ENSHBUG00000010964	rabl2	99	76.018	ENSPCOG00000024865	-	96	76.018	Propithecus_coquereli
ENSHBUG00000010964	rabl2	99	70.815	ENSPVAG00000004539	-	97	70.815	Pteropus_vampyrus
ENSHBUG00000010964	rabl2	100	100.000	ENSPNYG00000004845	rabl2	100	100.000	Pundamilia_nyererei
ENSHBUG00000010964	rabl2	91	84.080	ENSPNAG00000024254	rabl2	95	81.604	Pygocentrus_nattereri
ENSHBUG00000010964	rabl2	99	72.727	ENSRNOG00000013947	Rabl2	88	72.727	Rattus_norvegicus
ENSHBUG00000010964	rabl2	99	72.727	ENSRBIG00000033607	-	96	72.727	Rhinopithecus_bieti
ENSHBUG00000010964	rabl2	99	73.636	ENSRROG00000031130	-	96	73.636	Rhinopithecus_roxellana
ENSHBUG00000010964	rabl2	99	73.543	ENSSBOG00000033266	-	97	73.543	Saimiri_boliviensis_boliviensis
ENSHBUG00000010964	rabl2	92	81.863	ENSSFOG00015020738	rabl2	96	78.873	Scleropages_formosus
ENSHBUG00000010964	rabl2	100	93.722	ENSSMAG00000004606	rabl2	100	93.722	Scophthalmus_maximus
ENSHBUG00000010964	rabl2	99	93.243	ENSSDUG00000014765	rabl2	99	93.243	Seriola_dumerili
ENSHBUG00000010964	rabl2	77	78.824	ENSSSCG00000025041	-	100	78.824	Sus_scrofa
ENSHBUG00000010964	rabl2	90	72.772	ENSTGUG00000016028	-	97	72.772	Taeniopygia_guttata
ENSHBUG00000010964	rabl2	99	89.189	ENSTRUG00000012454	rabl2	99	89.189	Takifugu_rubripes
ENSHBUG00000010964	rabl2	100	89.238	ENSTNIG00000017951	rabl2	100	89.238	Tetraodon_nigroviridis
ENSHBUG00000010964	rabl2	93	75.845	ENSUAMG00000015761	-	92	75.845	Ursus_americanus
ENSHBUG00000010964	rabl2	99	73.874	ENSUMAG00000017116	-	99	73.874	Ursus_maritimus
ENSHBUG00000010964	rabl2	99	74.661	ENSVVUG00000025761	-	99	74.661	Vulpes_vulpes
ENSHBUG00000010964	rabl2	100	72.444	ENSXETG00000015712	rabl2b	100	72.444	Xenopus_tropicalis
ENSHBUG00000010964	rabl2	99	89.640	ENSXMAG00000004569	rabl2	99	89.640	Xiphophorus_maculatus