EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011042 (Gene tree)
Gene ID: 102313815
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 15726 bases
Position: chrJH425335.1:240531-256256
Accession: 102313815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027683	ResIII	PF04851.15	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000000129	-	4739	XM_005916135	ENSHBUP00000027683	1053 (aa)	XP_005916197	UPI0003BC61EB

Gene Model

Click here to download ENSHBUG00000011042's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011042	smarcad1a	50	36.101	ENSHBUG00000010270	hells	69	35.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011042	smarcad1a	99	61.172	ENSG00000163104	SMARCAD1	100	66.946	Homo_sapiens
ENSHBUG00000011042	smarcad1a	100	79.323	ENSAPOG00000011446	smarcad1a	100	78.893	Acanthochromis_polyacanthus
ENSHBUG00000011042	smarcad1a	89	61.043	ENSAMEG00000005844	SMARCAD1	98	62.235	Ailuropoda_melanoleuca
ENSHBUG00000011042	smarcad1a	70	92.180	ENSACIG00000018326	smarcad1a	97	92.180	Amphilophus_citrinellus
ENSHBUG00000011042	smarcad1a	100	79.718	ENSAOCG00000019762	smarcad1a	100	79.756	Amphiprion_ocellaris
ENSHBUG00000011042	smarcad1a	100	79.906	ENSAPEG00000003889	smarcad1a	100	79.944	Amphiprion_percula
ENSHBUG00000011042	smarcad1a	95	78.812	ENSATEG00000015608	smarcad1a	99	79.406	Anabas_testudineus
ENSHBUG00000011042	smarcad1a	78	67.601	ENSAPLG00000004630	SMARCAD1	89	63.165	Anas_platyrhynchos
ENSHBUG00000011042	smarcad1a	60	66.044	ENSACAG00000013554	SMARCAD1	67	62.861	Anolis_carolinensis
ENSHBUG00000011042	smarcad1a	99	61.005	ENSANAG00000020488	SMARCAD1	98	62.181	Aotus_nancymaae
ENSHBUG00000011042	smarcad1a	100	99.145	ENSACLG00000017063	smarcad1a	100	99.145	Astatotilapia_calliptera
ENSHBUG00000011042	smarcad1a	62	71.514	ENSAMXG00000015470	smarcad1a	94	71.514	Astyanax_mexicanus
ENSHBUG00000011042	smarcad1a	72	71.614	ENSAMXG00000019130	smarcad1b	87	72.052	Astyanax_mexicanus
ENSHBUG00000011042	smarcad1a	96	61.918	ENSBTAG00000017061	SMARCAD1	98	61.918	Bos_taurus
ENSHBUG00000011042	smarcad1a	60	41.667	WBGene00010845	M03C11.8	69	40.258	Caenorhabditis_elegans
ENSHBUG00000011042	smarcad1a	99	61.172	ENSCJAG00000006778	SMARCAD1	98	62.358	Callithrix_jacchus
ENSHBUG00000011042	smarcad1a	89	61.180	ENSCAFG00000010026	SMARCAD1	83	62.376	Canis_familiaris
ENSHBUG00000011042	smarcad1a	90	61.035	ENSCAFG00020003994	SMARCAD1	96	62.376	Canis_lupus_dingo
ENSHBUG00000011042	smarcad1a	99	60.899	ENSCHIG00000012905	SMARCAD1	98	62.216	Capra_hircus
ENSHBUG00000011042	smarcad1a	98	61.180	ENSTSYG00000002706	SMARCAD1	97	63.022	Carlito_syrichta
ENSHBUG00000011042	smarcad1a	88	56.278	ENSCAPG00000016744	SMARCAD1	90	56.130	Cavia_aperea
ENSHBUG00000011042	smarcad1a	84	66.459	ENSCPOG00000011398	SMARCAD1	80	66.459	Cavia_porcellus
ENSHBUG00000011042	smarcad1a	99	61.172	ENSCCAG00000022264	SMARCAD1	100	66.946	Cebus_capucinus
ENSHBUG00000011042	smarcad1a	99	61.172	ENSCATG00000035663	SMARCAD1	98	63.077	Cercocebus_atys
ENSHBUG00000011042	smarcad1a	86	61.172	ENSCSAG00000004186	SMARCAD1	98	62.358	Chlorocebus_sabaeus
ENSHBUG00000011042	smarcad1a	62	49.094	ENSCING00000001688	-	98	49.094	Ciona_intestinalis
ENSHBUG00000011042	smarcad1a	99	61.172	ENSCANG00000003556	SMARCAD1	100	66.946	Colobus_angolensis_palliatus
ENSHBUG00000011042	smarcad1a	69	59.973	ENSCGRG00001015056	Smarcad1	63	65.991	Cricetulus_griseus_chok1gshd
ENSHBUG00000011042	smarcad1a	69	59.973	ENSCGRG00000014087	Smarcad1	63	65.991	Cricetulus_griseus_crigri
ENSHBUG00000011042	smarcad1a	100	71.190	ENSCSEG00000017903	smarcad1a	100	70.442	Cynoglossus_semilaevis
ENSHBUG00000011042	smarcad1a	100	70.288	ENSCSEG00000014419	-	100	69.593	Cynoglossus_semilaevis
ENSHBUG00000011042	smarcad1a	62	74.962	ENSDARG00000073721	smarcad1b	73	72.166	Danio_rerio
ENSHBUG00000011042	smarcad1a	92	69.835	ENSDARG00000014041	smarcad1a	100	57.156	Danio_rerio
ENSHBUG00000011042	smarcad1a	98	61.073	ENSDNOG00000000806	-	98	62.393	Dasypus_novemcinctus
ENSHBUG00000011042	smarcad1a	96	62.235	ENSDORG00000012331	Smarcad1	98	62.235	Dipodomys_ordii
ENSHBUG00000011042	smarcad1a	61	44.648	FBgn0032157	Etl1	77	44.595	Drosophila_melanogaster
ENSHBUG00000011042	smarcad1a	60	48.983	ENSEBUG00000003969	smarcad1a	98	48.504	Eptatretus_burgeri
ENSHBUG00000011042	smarcad1a	96	62.235	ENSEASG00005012382	SMARCAD1	98	62.235	Equus_asinus_asinus
ENSHBUG00000011042	smarcad1a	96	62.235	ENSECAG00000011562	SMARCAD1	98	62.235	Equus_caballus
ENSHBUG00000011042	smarcad1a	73	70.088	ENSELUG00000019154	smarcad1b	78	70.088	Esox_lucius
ENSHBUG00000011042	smarcad1a	100	65.856	ENSELUG00000018535	smarcad1a	100	65.356	Esox_lucius
ENSHBUG00000011042	smarcad1a	99	61.035	ENSFCAG00000003958	SMARCAD1	100	66.946	Felis_catus
ENSHBUG00000011042	smarcad1a	83	64.435	ENSFDAG00000017027	SMARCAD1	80	64.435	Fukomys_damarensis
ENSHBUG00000011042	smarcad1a	100	69.153	ENSFHEG00000012778	smarcad1a	65	81.170	Fundulus_heteroclitus
ENSHBUG00000011042	smarcad1a	80	81.714	ENSGMOG00000018995	smarcad1a	97	81.714	Gadus_morhua
ENSHBUG00000011042	smarcad1a	82	59.870	ENSGALG00000037339	SMARCAD1	94	60.636	Gallus_gallus
ENSHBUG00000011042	smarcad1a	100	67.727	ENSGAFG00000013498	smarcad1a	63	79.315	Gambusia_affinis
ENSHBUG00000011042	smarcad1a	87	85.085	ENSGACG00000007327	smarcad1a	99	85.085	Gasterosteus_aculeatus
ENSHBUG00000011042	smarcad1a	71	61.273	ENSGAGG00000008582	SMARCAD1	67	64.502	Gopherus_agassizii
ENSHBUG00000011042	smarcad1a	99	61.172	ENSGGOG00000023001	SMARCAD1	98	62.358	Gorilla_gorilla
ENSHBUG00000011042	smarcad1a	83	64.435	ENSHGLG00000005070	SMARCAD1	79	64.435	Heterocephalus_glaber_female
ENSHBUG00000011042	smarcad1a	83	64.435	ENSHGLG00100006812	SMARCAD1	79	64.435	Heterocephalus_glaber_male
ENSHBUG00000011042	smarcad1a	100	61.744	ENSHCOG00000007848	smarcad1a	100	61.106	Hippocampus_comes
ENSHBUG00000011042	smarcad1a	99	55.929	ENSIPUG00000000242	smarcad1a	96	59.854	Ictalurus_punctatus
ENSHBUG00000011042	smarcad1a	71	73.926	ENSIPUG00000022817	smarcad1b	83	71.053	Ictalurus_punctatus
ENSHBUG00000011042	smarcad1a	90	65.991	ENSSTOG00000001227	SMARCAD1	92	65.991	Ictidomys_tridecemlineatus
ENSHBUG00000011042	smarcad1a	70	59.787	ENSJJAG00000022342	Smarcad1	62	66.147	Jaculus_jaculus
ENSHBUG00000011042	smarcad1a	99	74.144	ENSKMAG00000021351	smarcad1a	99	74.240	Kryptolebias_marmoratus
ENSHBUG00000011042	smarcad1a	100	73.803	ENSLBEG00000008088	smarcad1a	99	74.554	Labrus_bergylta
ENSHBUG00000011042	smarcad1a	85	73.828	ENSLOCG00000012909	smarcad1a	96	73.021	Lepisosteus_oculatus
ENSHBUG00000011042	smarcad1a	90	64.899	ENSLAFG00000000040	SMARCAD1	97	61.583	Loxodonta_africana
ENSHBUG00000011042	smarcad1a	99	61.172	ENSMFAG00000042606	SMARCAD1	98	62.358	Macaca_fascicularis
ENSHBUG00000011042	smarcad1a	90	61.172	ENSMMUG00000022242	SMARCAD1	96	62.358	Macaca_mulatta
ENSHBUG00000011042	smarcad1a	99	61.172	ENSMNEG00000038117	SMARCAD1	100	66.946	Macaca_nemestrina
ENSHBUG00000011042	smarcad1a	99	61.172	ENSMLEG00000038333	SMARCAD1	100	66.946	Mandrillus_leucophaeus
ENSHBUG00000011042	smarcad1a	100	79.887	ENSMAMG00000000933	smarcad1a	100	79.037	Mastacembelus_armatus
ENSHBUG00000011042	smarcad1a	100	96.106	ENSMZEG00005005203	smarcad1a	100	96.106	Maylandia_zebra
ENSHBUG00000011042	smarcad1a	83	64.937	ENSMGAG00000005577	SMARCAD1	87	64.937	Meleagris_gallopavo
ENSHBUG00000011042	smarcad1a	70	59.329	ENSMAUG00000008417	Smarcad1	63	66.147	Mesocricetus_auratus
ENSHBUG00000011042	smarcad1a	69	61.012	ENSMICG00000009746	SMARCAD1	62	66.252	Microcebus_murinus
ENSHBUG00000011042	smarcad1a	98	60.274	ENSMOCG00000017142	Smarcad1	92	66.303	Microtus_ochrogaster
ENSHBUG00000011042	smarcad1a	73	87.372	ENSMMOG00000000275	smarcad1a	100	85.355	Mola_mola
ENSHBUG00000011042	smarcad1a	89	61.853	ENSMODG00000019268	SMARCAD1	76	67.239	Monodelphis_domestica
ENSHBUG00000011042	smarcad1a	78	65.991	MGP_CAROLIEiJ_G0028458	-	61	65.991	Mus_caroli
ENSHBUG00000011042	smarcad1a	60	65.991	ENSMUSG00000029920	Smarcad1	63	65.991	Mus_musculus
ENSHBUG00000011042	smarcad1a	60	65.991	MGP_PahariEiJ_G0022198	Smarcad1	63	65.991	Mus_pahari
ENSHBUG00000011042	smarcad1a	60	65.991	MGP_SPRETEiJ_G0029462	Smarcad1	63	65.991	Mus_spretus
ENSHBUG00000011042	smarcad1a	98	61.043	ENSMPUG00000002111	SMARCAD1	98	62.235	Mustela_putorius_furo
ENSHBUG00000011042	smarcad1a	99	60.598	ENSMLUG00000000425	SMARCAD1	92	66.252	Myotis_lucifugus
ENSHBUG00000011042	smarcad1a	60	65.835	ENSNGAG00000000810	Smarcad1	63	65.835	Nannospalax_galili
ENSHBUG00000011042	smarcad1a	76	95.931	ENSNBRG00000012749	smarcad1a	97	95.931	Neolamprologus_brichardi
ENSHBUG00000011042	smarcad1a	99	61.172	ENSNLEG00000014225	SMARCAD1	100	66.946	Nomascus_leucogenys
ENSHBUG00000011042	smarcad1a	81	66.459	ENSODEG00000004334	SMARCAD1	82	62.787	Octodon_degus
ENSHBUG00000011042	smarcad1a	90	95.788	ENSONIG00000015059	smarcad1a	100	91.266	Oreochromis_niloticus
ENSHBUG00000011042	smarcad1a	72	68.274	ENSOANG00000013764	SMARCAD1	95	64.034	Ornithorhynchus_anatinus
ENSHBUG00000011042	smarcad1a	98	60.660	ENSOCUG00000017283	SMARCAD1	98	62.074	Oryctolagus_cuniculus
ENSHBUG00000011042	smarcad1a	100	71.295	ENSORLG00000004869	smarcad1a	100	71.159	Oryzias_latipes
ENSHBUG00000011042	smarcad1a	100	71.295	ENSORLG00020020569	smarcad1a	100	71.065	Oryzias_latipes_hni
ENSHBUG00000011042	smarcad1a	100	71.107	ENSORLG00015009045	smarcad1a	100	70.971	Oryzias_latipes_hsok
ENSHBUG00000011042	smarcad1a	99	71.469	ENSOMEG00000023032	smarcad1a	100	71.050	Oryzias_melastigma
ENSHBUG00000011042	smarcad1a	60	65.941	ENSOGAG00000011444	SMARCAD1	63	65.941	Otolemur_garnettii
ENSHBUG00000011042	smarcad1a	99	60.899	ENSOARG00000017851	SMARCAD1	98	62.216	Ovis_aries
ENSHBUG00000011042	smarcad1a	99	61.172	ENSPPAG00000035715	SMARCAD1	98	62.358	Pan_paniscus
ENSHBUG00000011042	smarcad1a	99	61.035	ENSPPRG00000024756	SMARCAD1	100	66.946	Panthera_pardus
ENSHBUG00000011042	smarcad1a	99	60.870	ENSPTIG00000017868	SMARCAD1	92	66.252	Panthera_tigris_altaica
ENSHBUG00000011042	smarcad1a	99	61.172	ENSPTRG00000023126	SMARCAD1	100	66.946	Pan_troglodytes
ENSHBUG00000011042	smarcad1a	99	59.837	ENSPANG00000019757	SMARCAD1	98	62.323	Papio_anubis
ENSHBUG00000011042	smarcad1a	71	61.406	ENSPSIG00000010255	SMARCAD1	66	64.791	Pelodiscus_sinensis
ENSHBUG00000011042	smarcad1a	61	78.106	ENSPMGG00000010735	smarcad1a	97	76.540	Periophthalmus_magnuspinnatus
ENSHBUG00000011042	smarcad1a	98	53.232	ENSPEMG00000001854	Smarcad1	97	54.533	Peromyscus_maniculatus_bairdii
ENSHBUG00000011042	smarcad1a	94	56.714	ENSPMAG00000003516	smarcad1a	95	56.714	Petromyzon_marinus
ENSHBUG00000011042	smarcad1a	82	61.989	ENSPCIG00000008137	SMARCAD1	85	67.707	Phascolarctos_cinereus
ENSHBUG00000011042	smarcad1a	100	70.300	ENSPFOG00000019116	smarcad1a	100	67.993	Poecilia_formosa
ENSHBUG00000011042	smarcad1a	100	70.253	ENSPLAG00000000108	smarcad1a	100	67.957	Poecilia_latipinna
ENSHBUG00000011042	smarcad1a	100	70.209	ENSPMEG00000009155	smarcad1a	100	67.902	Poecilia_mexicana
ENSHBUG00000011042	smarcad1a	100	72.625	ENSPREG00000018185	smarcad1a	100	71.109	Poecilia_reticulata
ENSHBUG00000011042	smarcad1a	99	60.734	ENSPPYG00000014935	SMARCAD1	98	61.898	Pongo_abelii
ENSHBUG00000011042	smarcad1a	89	60.164	ENSPVAG00000001760	SMARCAD1	92	65.625	Pteropus_vampyrus
ENSHBUG00000011042	smarcad1a	76	98.137	ENSPNYG00000010087	smarcad1a	97	98.137	Pundamilia_nyererei
ENSHBUG00000011042	smarcad1a	100	57.940	ENSPNAG00000001663	smarcad1a	100	57.278	Pygocentrus_nattereri
ENSHBUG00000011042	smarcad1a	73	72.714	ENSPNAG00000010099	smarcad1b	83	73.043	Pygocentrus_nattereri
ENSHBUG00000011042	smarcad1a	90	66.303	ENSRNOG00000006391	Smarcad1	92	66.303	Rattus_norvegicus
ENSHBUG00000011042	smarcad1a	99	61.172	ENSRBIG00000041989	SMARCAD1	98	62.358	Rhinopithecus_bieti
ENSHBUG00000011042	smarcad1a	99	61.172	ENSRROG00000035309	SMARCAD1	98	62.358	Rhinopithecus_roxellana
ENSHBUG00000011042	smarcad1a	99	61.172	ENSSBOG00000032114	SMARCAD1	100	66.946	Saimiri_boliviensis_boliviensis
ENSHBUG00000011042	smarcad1a	100	56.627	ENSSHAG00000001279	SMARCAD1	100	58.175	Sarcophilus_harrisii
ENSHBUG00000011042	smarcad1a	97	68.966	ENSSFOG00015016814	smarcad1b	92	74.603	Scleropages_formosus
ENSHBUG00000011042	smarcad1a	67	70.251	ENSSFOG00015020909	smarcad1a	95	70.251	Scleropages_formosus
ENSHBUG00000011042	smarcad1a	100	78.419	ENSSMAG00000001326	smarcad1a	100	78.305	Scophthalmus_maximus
ENSHBUG00000011042	smarcad1a	78	83.112	ENSSDUG00000022338	smarcad1a	99	82.656	Seriola_dumerili
ENSHBUG00000011042	smarcad1a	100	77.923	ENSSLDG00000024986	smarcad1a	100	78.765	Seriola_lalandi_dorsalis
ENSHBUG00000011042	smarcad1a	56	68.739	ENSSPUG00000004633	SMARCAD1	99	68.739	Sphenodon_punctatus
ENSHBUG00000011042	smarcad1a	100	79.531	ENSSPAG00000001970	smarcad1a	100	79.288	Stegastes_partitus
ENSHBUG00000011042	smarcad1a	96	62.235	ENSSSCG00000009193	SMARCAD1	98	62.235	Sus_scrofa
ENSHBUG00000011042	smarcad1a	74	63.418	ENSTGUG00000003127	SMARCAD1	96	63.803	Taeniopygia_guttata
ENSHBUG00000011042	smarcad1a	86	85.449	ENSTNIG00000017585	smarcad1a	97	85.449	Tetraodon_nigroviridis
ENSHBUG00000011042	smarcad1a	74	69.444	ENSTBEG00000002789	SMARCAD1	82	69.444	Tupaia_belangeri
ENSHBUG00000011042	smarcad1a	89	60.544	ENSTTRG00000000226	SMARCAD1	83	62.882	Tursiops_truncatus
ENSHBUG00000011042	smarcad1a	89	61.043	ENSUAMG00000022262	SMARCAD1	98	62.235	Ursus_americanus
ENSHBUG00000011042	smarcad1a	89	61.043	ENSUMAG00000004549	SMARCAD1	98	62.235	Ursus_maritimus
ENSHBUG00000011042	smarcad1a	89	61.180	ENSVVUG00000007271	SMARCAD1	98	61.938	Vulpes_vulpes
ENSHBUG00000011042	smarcad1a	89	57.163	ENSXETG00000019214	smarcad1	94	59.222	Xenopus_tropicalis
ENSHBUG00000011042	smarcad1a	79	82.519	ENSXCOG00000005232	smarcad1a	86	83.359	Xiphophorus_couchianus
ENSHBUG00000011042	smarcad1a	100	70.246	ENSXMAG00000015350	smarcad1a	100	69.378	Xiphophorus_maculatus