EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011119 (Gene tree)
Gene ID: 102297151
Gene Symbol: -
Alias: -
Full Name: interferon-induced GTP-binding protein Mx-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 20110 bases
Position: chrJH425346.1:3215473-3235582
Accession: 102297151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000026982	MMR_HSR1	PF01926.23	8.7e-06	1	1
ENSHBUP00000008497	MMR_HSR1	PF01926.23	9.3e-06	1	1
ENSHBUP00000027015	MMR_HSR1	PF01926.23	9.4e-06	1	1
ENSHBUP00000008466	MMR_HSR1	PF01926.23	1e-05	1	1
ENSHBUP00000009102	MMR_HSR1	PF01926.23	1e-05	1	1
ENSHBUP00000008574	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSHBUP00000009096	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSHBUP00000027392	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSHBUP00000008725	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSHBUP00000008616	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000001454	-	1734	-	ENSHBUP00000008725	577 (aa)	-	-
ENSHBUT00000000934	-	1884	-	ENSHBUP00000027392	627 (aa)	-	-
ENSHBUT00000000816	-	1851	-	ENSHBUP00000009102	616 (aa)	-	-
ENSHBUT00000001963	-	1746	-	ENSHBUP00000026982	581 (aa)	-	-
ENSHBUT00000001851	-	1788	XM_005918711	ENSHBUP00000008497	595 (aa)	XP_005918773	-
ENSHBUT00000001873	-	1836	-	ENSHBUP00000027015	611 (aa)	-	-
ENSHBUT00000001713	-	1833	-	ENSHBUP00000008574	610 (aa)	-	-
ENSHBUT00000001899	-	1746	-	ENSHBUP00000008466	581 (aa)	-	-
ENSHBUT00000000829	-	1878	-	ENSHBUP00000009096	625 (aa)	-	-
ENSHBUT00000001642	-	1815	-	ENSHBUP00000008616	604 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000011119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011119	-	77	33.830	ENSHBUG00000004929	-	69	33.974
ENSHBUG00000011119	-	97	68.190	ENSHBUG00000006779	-	99	67.703
ENSHBUG00000011119	-	78	32.505	ENSHBUG00000001952	dnm1l	67	31.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011119	-	96	68.440	ENSAPOG00000009488	-	92	67.591	Acanthochromis_polyacanthus
ENSHBUG00000011119	-	96	83.423	ENSACIG00000004365	-	88	83.423	Amphilophus_citrinellus
ENSHBUG00000011119	-	68	77.551	ENSATEG00000018869	-	99	77.551	Anabas_testudineus
ENSHBUG00000011119	-	96	97.117	ENSACLG00000015278	-	86	98.527	Astatotilapia_calliptera
ENSHBUG00000011119	-	52	68.456	ENSAMXG00000044008	-	98	68.000	Astyanax_mexicanus
ENSHBUG00000011119	-	53	66.337	ENSCAPG00000014240	-	98	66.337	Cavia_aperea
ENSHBUG00000011119	-	96	55.755	ENSCPBG00000012852	-	81	55.070	Chrysemys_picta_bellii
ENSHBUG00000011119	-	96	67.145	ENSCSEG00000005684	MX1	92	66.257	Cynoglossus_semilaevis
ENSHBUG00000011119	-	96	54.982	ENSGAGG00000009392	-	89	54.448	Gopherus_agassizii
ENSHBUG00000011119	-	96	58.824	ENSIPUG00000004815	-	92	57.766	Ictalurus_punctatus
ENSHBUG00000011119	-	96	54.610	ENSIPUG00000017098	-	97	51.967	Ictalurus_punctatus
ENSHBUG00000011119	-	96	54.352	ENSIPUG00000017075	-	97	51.724	Ictalurus_punctatus
ENSHBUG00000011119	-	96	62.903	ENSLOCG00000006389	MX1	97	59.833	Lepisosteus_oculatus
ENSHBUG00000011119	-	96	96.577	ENSMZEG00005012472	MX1	98	98.966	Maylandia_zebra
ENSHBUG00000011119	-	96	92.920	ENSONIG00000020363	-	88	92.920	Oreochromis_niloticus
ENSHBUG00000011119	-	96	70.304	ENSOMEG00000008446	-	95	77.099	Oryzias_melastigma
ENSHBUG00000011119	-	67	76.227	ENSPNYG00000001309	MX1	97	76.227	Pundamilia_nyererei
ENSHBUG00000011119	-	100	98.880	ENSPNYG00000001452	-	100	98.880	Pundamilia_nyererei
ENSHBUG00000011119	-	96	65.432	ENSPNAG00000027889	-	92	64.594	Pygocentrus_nattereri
ENSHBUG00000011119	-	93	61.439	ENSSFOG00015011797	MX1	91	60.870	Scleropages_formosus
ENSHBUG00000011119	-	96	67.254	ENSSMAG00000010402	MX1	97	64.754	Scophthalmus_maximus
ENSHBUG00000011119	-	96	73.145	ENSSLDG00000014433	-	90	72.021	Seriola_lalandi_dorsalis
ENSHBUG00000011119	-	51	66.892	ENSSPUG00000003071	-	95	66.892	Sphenodon_punctatus
ENSHBUG00000011119	-	96	72.973	ENSXCOG00000010594	MX1	95	71.480	Xiphophorus_couchianus
ENSHBUG00000011119	-	96	73.153	ENSXMAG00000002020	MX1	90	71.958	Xiphophorus_maculatus