EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000011141 (Gene tree)
Gene ID: 102314235
Gene Symbol: rbm42
Alias: mgc10433l|zgc:109907
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 8269 bases
Position: chrJH425810.1:187012-195280
Accession: 102314235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000009613	RRM_1	PF00076.22	6.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031360	-	3012	XM_005946334	ENSHBUP00000009613	402 (aa)	XP_005946396	UPI0003BD7B52

Gene Model

Click here to download ENSHBUG00000011141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011141	rbm42	100	86.946	ENSAPOG00000015109	rbm42	100	86.946	Acanthochromis_polyacanthus
ENSHBUG00000011141	rbm42	100	87.160	ENSACIG00000010771	rbm42	100	87.160	Amphilophus_citrinellus
ENSHBUG00000011141	rbm42	100	86.946	ENSAOCG00000008873	rbm42	100	86.946	Amphiprion_ocellaris
ENSHBUG00000011141	rbm42	100	86.946	ENSAPEG00000012051	rbm42	99	86.946	Amphiprion_percula
ENSHBUG00000011141	rbm42	100	86.207	ENSATEG00000000536	rbm42	100	86.207	Anabas_testudineus
ENSHBUG00000011141	rbm42	100	99.751	ENSACLG00000004988	rbm42	100	99.751	Astatotilapia_calliptera
ENSHBUG00000011141	rbm42	100	74.458	ENSAMXG00000016545	rbm42	100	74.940	Astyanax_mexicanus
ENSHBUG00000011141	rbm42	97	80.605	ENSCSEG00000010248	rbm42	100	80.856	Cynoglossus_semilaevis
ENSHBUG00000011141	rbm42	100	80.732	ENSCVAG00000015589	rbm42	100	81.463	Cyprinodon_variegatus
ENSHBUG00000011141	rbm42	100	71.046	ENSDARG00000039910	rbm42	100	72.573	Danio_rerio
ENSHBUG00000011141	rbm42	100	72.300	ENSELUG00000022403	rbm42	100	72.577	Esox_lucius
ENSHBUG00000011141	rbm42	65	78.388	ENSFHEG00000006764	rbm42	91	79.853	Fundulus_heteroclitus
ENSHBUG00000011141	rbm42	100	72.263	ENSGMOG00000012660	rbm42	100	71.533	Gadus_morhua
ENSHBUG00000011141	rbm42	76	81.290	ENSGAFG00000009059	rbm42	99	80.906	Gambusia_affinis
ENSHBUG00000011141	rbm42	100	82.716	ENSGACG00000004170	rbm42	100	82.222	Gasterosteus_aculeatus
ENSHBUG00000011141	rbm42	100	81.773	ENSHCOG00000021214	rbm42	100	80.392	Hippocampus_comes
ENSHBUG00000011141	rbm42	100	73.141	ENSIPUG00000022365	rbm42	99	73.381	Ictalurus_punctatus
ENSHBUG00000011141	rbm42	91	79.784	ENSKMAG00000015287	rbm42	99	79.784	Kryptolebias_marmoratus
ENSHBUG00000011141	rbm42	100	81.127	ENSLBEG00000017547	rbm42	100	82.843	Labrus_bergylta
ENSHBUG00000011141	rbm42	84	80.870	ENSLBEG00000004578	-	96	82.184	Labrus_bergylta
ENSHBUG00000011141	rbm42	100	67.773	ENSLOCG00000003368	rbm42	100	68.720	Lepisosteus_oculatus
ENSHBUG00000011141	rbm42	100	86.207	ENSMAMG00000006708	rbm42	100	86.207	Mastacembelus_armatus
ENSHBUG00000011141	rbm42	100	99.751	ENSMZEG00005025234	rbm42	100	99.751	Maylandia_zebra
ENSHBUG00000011141	rbm42	91	86.450	ENSMALG00000015720	rbm42	100	86.450	Monopterus_albus
ENSHBUG00000011141	rbm42	100	96.569	ENSONIG00000008029	rbm42	100	96.569	Oreochromis_niloticus
ENSHBUG00000011141	rbm42	100	63.702	ENSORLG00020022507	rbm42	100	63.462	Oryzias_latipes_hni
ENSHBUG00000011141	rbm42	100	82.469	ENSORLG00015000659	rbm42	100	82.469	Oryzias_latipes_hsok
ENSHBUG00000011141	rbm42	60	84.232	ENSOMEG00000014332	rbm42	99	79.848	Oryzias_melastigma
ENSHBUG00000011141	rbm42	100	73.861	ENSPKIG00000015165	rbm42	100	72.947	Paramormyrops_kingsleyae
ENSHBUG00000011141	rbm42	93	67.279	ENSPMGG00000003569	rbm42	100	97.143	Periophthalmus_magnuspinnatus
ENSHBUG00000011141	rbm42	54	55.605	ENSPMAG00000008633	rbm42	100	49.593	Petromyzon_marinus
ENSHBUG00000011141	rbm42	100	80.637	ENSPFOG00000007701	rbm42	100	80.488	Poecilia_formosa
ENSHBUG00000011141	rbm42	100	80.392	ENSPLAG00000009405	rbm42	100	80.244	Poecilia_latipinna
ENSHBUG00000011141	rbm42	100	80.392	ENSPMEG00000010375	rbm42	100	80.244	Poecilia_mexicana
ENSHBUG00000011141	rbm42	100	80.882	ENSPREG00000018102	rbm42	100	80.732	Poecilia_reticulata
ENSHBUG00000011141	rbm42	100	99.502	ENSPNYG00000014460	rbm42	100	99.502	Pundamilia_nyererei
ENSHBUG00000011141	rbm42	100	72.619	ENSPNAG00000009961	rbm42	100	73.445	Pygocentrus_nattereri
ENSHBUG00000011141	rbm42	100	70.657	ENSSFOG00015019227	rbm42	100	71.496	Scleropages_formosus
ENSHBUG00000011141	rbm42	100	84.275	ENSSMAG00000011935	rbm42	100	84.521	Scophthalmus_maximus
ENSHBUG00000011141	rbm42	100	88.670	ENSSDUG00000004033	rbm42	100	88.670	Seriola_dumerili
ENSHBUG00000011141	rbm42	100	79.104	ENSSLDG00000009918	rbm42	100	96.471	Seriola_lalandi_dorsalis
ENSHBUG00000011141	rbm42	100	87.685	ENSSPAG00000019871	rbm42	100	87.685	Stegastes_partitus
ENSHBUG00000011141	rbm42	100	78.765	ENSTRUG00000024586	-	76	77.778	Takifugu_rubripes
ENSHBUG00000011141	rbm42	99	66.364	ENSTNIG00000011669	rbm42	100	68.707	Tetraodon_nigroviridis
ENSHBUG00000011141	rbm42	100	55.180	ENSXETG00000017599	rbm42	100	58.645	Xenopus_tropicalis
ENSHBUG00000011141	rbm42	100	80.882	ENSXMAG00000012827	rbm42	100	80.732	Xiphophorus_maculatus