EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011264 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2703 bases
Position: chrJH425487.1:1192610-1195312
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000009726	zf-C2H2	PF00096.26	6.9e-17	1	3
ENSHBUP00000009726	zf-C2H2	PF00096.26	6.9e-17	2	3
ENSHBUP00000009726	zf-C2H2	PF00096.26	6.9e-17	3	3
ENSHBUP00000009726	zf-met	PF12874.7	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016406	-	1296	-	ENSHBUP00000009726	431 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000011264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011264's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011264	-	50	46.154	ENSHBUG00000000146	-	79	46.154
ENSHBUG00000011264	-	57	44.545	ENSHBUG00000003449	-	90	44.545
ENSHBUG00000011264	-	55	51.020	ENSHBUG00000012230	-	73	51.020
ENSHBUG00000011264	-	57	41.053	ENSHBUG00000009815	znf319b	82	41.053
ENSHBUG00000011264	-	51	47.009	ENSHBUG00000015166	-	80	47.009
ENSHBUG00000011264	-	55	39.831	ENSHBUG00000019090	ZNF319	80	39.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011264	-	100	99.537	ENSACLG00000023669	-	100	99.537	Astatotilapia_calliptera
ENSHBUG00000011264	-	100	99.768	ENSMZEG00005020337	-	100	99.768	Maylandia_zebra
ENSHBUG00000011264	-	83	41.176	ENSNBRG00000013838	-	96	41.176	Neolamprologus_brichardi
ENSHBUG00000011264	-	100	99.537	ENSPNYG00000016409	-	100	99.537	Pundamilia_nyererei
ENSHBUG00000011264	-	51	45.378	ENSXETG00000002690	-	56	45.378	Xenopus_tropicalis