EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHBUG00000011284 (Gene tree)
Gene ID
102306729
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Haplochromis_burtoni
Status
putative
Strand
Minus strand
Length
11507 bases
Position
chrJH425442.1:569698-581204
Accession
102306729
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHBUP00000027830YTHPF04146.157e-4111
ENSHBUP00000027814YTHPF04146.157.9e-4111
ENSHBUP00000009739YTHPF04146.158e-4111
ENSHBUP00000027837YTHPF04146.158.5e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHBUT00000016374-1743-ENSHBUP00000027814580 (aa)--
ENSHBUT00000031413-6434XM_005930658ENSHBUP00000027837635 (aa)XP_005930720UPI0003AF3BDD
ENSHBUT00000016412-7240-ENSHBUP00000027830566 (aa)--
ENSHBUT00000031414-6447XM_005930659ENSHBUP00000009739623 (aa)XP_005930721-
Gene Model
Click here to download ENSHBUG00000011284's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011284's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHBUG00000011284ythdf19658.925ENSHBUG00000007355ythdf29659.005
ENSHBUG00000011284ythdf19858.491ENSHBUG00000018631ythdf39757.307
ENSHBUG00000011284ythdf19975.777ENSHBUG00000004875YTHDF19977.398
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHBUG00000011284ythdf19871.853ENSG00000149658YTHDF19671.429Homo_sapiens
ENSHBUG00000011284ythdf19975.817ENSAPOG00000010796YTHDF19977.564Acanthochromis_polyacanthus
ENSHBUG00000011284ythdf19794.498ENSAPOG00000004358ythdf110094.671Acanthochromis_polyacanthus
ENSHBUG00000011284ythdf19671.119ENSAMEG00000017323YTHDF19372.545Ailuropoda_melanoleuca
ENSHBUG00000011284ythdf19777.217ENSACIG00000020083YTHDF19677.816Amphilophus_citrinellus
ENSHBUG00000011284ythdf19989.828ENSACIG00000011264ythdf19989.828Amphilophus_citrinellus
ENSHBUG00000011284ythdf19794.327ENSAOCG00000022251ythdf19994.327Amphiprion_ocellaris
ENSHBUG00000011284ythdf19976.471ENSAOCG00000012567YTHDF19977.404Amphiprion_ocellaris
ENSHBUG00000011284ythdf19794.327ENSAPEG00000021878ythdf19994.327Amphiprion_percula
ENSHBUG00000011284ythdf19976.634ENSAPEG00000008750YTHDF19977.564Amphiprion_percula
ENSHBUG00000011284ythdf19793.137ENSATEG00000023840ythdf19992.810Anabas_testudineus
ENSHBUG00000011284ythdf19976.098ENSATEG00000005996YTHDF19977.280Anabas_testudineus
ENSHBUG00000011284ythdf19672.222ENSAPLG00000005985YTHDF19473.273Anas_platyrhynchos
ENSHBUG00000011284ythdf19872.174ENSACAG00000005560YTHDF19671.902Anolis_carolinensis
ENSHBUG00000011284ythdf19960.000ENSANAG00000021022-9660.069Aotus_nancymaae
ENSHBUG00000011284ythdf19871.429ENSANAG00000034786-9672.941Aotus_nancymaae
ENSHBUG00000011284ythdf19976.268ENSACLG00000025518YTHDF19977.886Astatotilapia_calliptera
ENSHBUG00000011284ythdf19769.406ENSBTAG00000010383YTHDF19671.457Bos_taurus
ENSHBUG00000011284ythdf19870.979ENSCJAG00000010056YTHDF19671.076Callithrix_jacchus
ENSHBUG00000011284ythdf18872.374ENSCAFG00000012772YTHDF19673.031Canis_familiaris
ENSHBUG00000011284ythdf18872.374ENSCAFG00020001214YTHDF19673.031Canis_lupus_dingo
ENSHBUG00000011284ythdf19769.069ENSCHIG00000026494YTHDF19669.841Capra_hircus
ENSHBUG00000011284ythdf19671.712ENSTSYG00000033436YTHDF19472.414Carlito_syrichta
ENSHBUG00000011284ythdf19771.076ENSCAPG00000002544YTHDF19071.275Cavia_aperea
ENSHBUG00000011284ythdf19870.332ENSCPOG00000010202YTHDF19670.629Cavia_porcellus
ENSHBUG00000011284ythdf19969.863ENSCCAG00000024650YTHDF19671.127Cebus_capucinus
ENSHBUG00000011284ythdf19871.030ENSCATG00000033272YTHDF19671.781Cercocebus_atys
ENSHBUG00000011284ythdf19971.034ENSCLAG00000005989YTHDF19671.479Chinchilla_lanigera
ENSHBUG00000011284ythdf19871.030ENSCSAG00000016266YTHDF19671.781Chlorocebus_sabaeus
ENSHBUG00000011284ythdf19872.021ENSCPBG00000027183YTHDF19671.804Chrysemys_picta_bellii
ENSHBUG00000011284ythdf19671.942ENSCANG00000029082YTHDF19571.303Colobus_angolensis_palliatus
ENSHBUG00000011284ythdf19972.586ENSCGRG00001016568Ythdf19671.880Cricetulus_griseus_chok1gshd
ENSHBUG00000011284ythdf19673.333ENSCGRG00000009207Ythdf19572.826Cricetulus_griseus_crigri
ENSHBUG00000011284ythdf19785.891ENSCSEG00000020623YTHDF19786.596Cynoglossus_semilaevis
ENSHBUG00000011284ythdf19788.254ENSCVAG00000017940ythdf19987.928Cyprinodon_variegatus
ENSHBUG00000011284ythdf19976.268ENSCVAG00000014378YTHDF19977.974Cyprinodon_variegatus
ENSHBUG00000011284ythdf19981.924ENSDARG00000016447ythdf19982.276Danio_rerio
ENSHBUG00000011284ythdf19871.728ENSDNOG00000043590YTHDF19672.007Dasypus_novemcinctus
ENSHBUG00000011284ythdf19669.643ENSDORG00000002879Ythdf19170.144Dipodomys_ordii
ENSHBUG00000011284ythdf19455.405ENSETEG00000017860-9555.405Echinops_telfairi
ENSHBUG00000011284ythdf19971.870ENSEASG00005023186YTHDF19671.781Equus_asinus_asinus
ENSHBUG00000011284ythdf19972.193ENSECAG00000019475YTHDF19673.425Equus_caballus
ENSHBUG00000011284ythdf19370.833ENSEEUG00000007461YTHDF19672.904Erinaceus_europaeus
ENSHBUG00000011284ythdf19982.838ENSELUG00000022768ythdf19985.808Esox_lucius
ENSHBUG00000011284ythdf19970.126ENSELUG00000001906YTHDF19675.605Esox_lucius
ENSHBUG00000011284ythdf19770.423ENSFCAG00000008917YTHDF19671.429Felis_catus
ENSHBUG00000011284ythdf19871.848ENSFALG00000010463YTHDF19671.629Ficedula_albicollis
ENSHBUG00000011284ythdf19871.127ENSFDAG00000019602YTHDF19670.629Fukomys_damarensis
ENSHBUG00000011284ythdf19777.583ENSFHEG00000002540YTHDF19976.960Fundulus_heteroclitus
ENSHBUG00000011284ythdf19789.369ENSFHEG00000023218ythdf19989.052Fundulus_heteroclitus
ENSHBUG00000011284ythdf15486.510ENSGMOG00000019610ythdf15586.510Gadus_morhua
ENSHBUG00000011284ythdf19871.130ENSGALG00000005745YTHDF19673.622Gallus_gallus
ENSHBUG00000011284ythdf19976.307ENSGAFG00000021100YTHDF19977.120Gambusia_affinis
ENSHBUG00000011284ythdf19792.238ENSGACG00000012014ythdf19991.297Gasterosteus_aculeatus
ENSHBUG00000011284ythdf19976.884ENSGACG00000002613YTHDF19777.066Gasterosteus_aculeatus
ENSHBUG00000011284ythdf19872.193ENSGAGG00000003007YTHDF19672.154Gopherus_agassizii
ENSHBUG00000011284ythdf19772.968ENSGGOG00000008340YTHDF19671.429Gorilla_gorilla
ENSHBUG00000011284ythdf19871.254ENSHGLG00000006585YTHDF19671.303Heterocephalus_glaber_female
ENSHBUG00000011284ythdf19871.254ENSHGLG00100004683YTHDF19671.303Heterocephalus_glaber_male
ENSHBUG00000011284ythdf19984.185ENSHCOG00000008866ythdf19787.223Hippocampus_comes
ENSHBUG00000011284ythdf19974.098ENSHCOG00000011303YTHDF19975.723Hippocampus_comes
ENSHBUG00000011284ythdf19977.446ENSIPUG00000000425Ythdf19978.491Ictalurus_punctatus
ENSHBUG00000011284ythdf19671.712ENSSTOG00000023001YTHDF19572.333Ictidomys_tridecemlineatus
ENSHBUG00000011284ythdf19872.028ENSJJAG00000013589Ythdf19572.777Jaculus_jaculus
ENSHBUG00000011284ythdf19976.190ENSKMAG00000017472YTHDF19977.170Kryptolebias_marmoratus
ENSHBUG00000011284ythdf19790.312ENSKMAG00000005595ythdf19989.819Kryptolebias_marmoratus
ENSHBUG00000011284ythdf19975.856ENSLBEG00000012068YTHDF19976.800Labrus_bergylta
ENSHBUG00000011284ythdf19790.844ENSLBEG00000014105ythdf19991.830Labrus_bergylta
ENSHBUG00000011284ythdf19773.227ENSLACG00000014195YTHDF19572.958Latimeria_chalumnae
ENSHBUG00000011284ythdf19975.731ENSLOCG00000005020ythdf19974.104Lepisosteus_oculatus
ENSHBUG00000011284ythdf19871.804ENSLAFG00000008884YTHDF19671.605Loxodonta_africana
ENSHBUG00000011284ythdf19871.030ENSMFAG00000042868YTHDF19671.781Macaca_fascicularis
ENSHBUG00000011284ythdf19872.056ENSMMUG00000009227YTHDF19671.781Macaca_mulatta
ENSHBUG00000011284ythdf19871.030ENSMNEG00000030851YTHDF19671.781Macaca_nemestrina
ENSHBUG00000011284ythdf19772.340ENSMLEG00000009252YTHDF19572.909Mandrillus_leucophaeus
ENSHBUG00000011284ythdf19975.570ENSMAMG00000011072YTHDF19977.280Mastacembelus_armatus
ENSHBUG00000011284ythdf19892.349ENSMAMG00000024255ythdf19991.311Mastacembelus_armatus
ENSHBUG00000011284ythdf197100.000ENSMZEG00005026397ythdf199100.000Maylandia_zebra
ENSHBUG00000011284ythdf19975.777ENSMZEG00005023596YTHDF19977.398Maylandia_zebra
ENSHBUG00000011284ythdf19672.043ENSMGAG00000006139YTHDF19571.479Meleagris_gallopavo
ENSHBUG00000011284ythdf19972.569ENSMAUG00000017660Ythdf19772.242Mesocricetus_auratus
ENSHBUG00000011284ythdf19870.804ENSMICG00000032266YTHDF19670.899Microcebus_murinus
ENSHBUG00000011284ythdf19872.378ENSMOCG00000013573Ythdf19671.880Microtus_ochrogaster
ENSHBUG00000011284ythdf19785.690ENSMMOG00000017500ythdf19586.509Mola_mola
ENSHBUG00000011284ythdf19976.480ENSMMOG00000020467YTHDF19876.898Mola_mola
ENSHBUG00000011284ythdf19373.194ENSMODG00000016842YTHDF19674.409Monodelphis_domestica
ENSHBUG00000011284ythdf19790.762ENSMALG00000015672ythdf19990.894Monopterus_albus
ENSHBUG00000011284ythdf19777.217ENSMALG00000022209YTHDF19976.452Monopterus_albus
ENSHBUG00000011284ythdf19872.125MGP_CAROLIEiJ_G0024790Ythdf19671.705Mus_caroli
ENSHBUG00000011284ythdf19872.125ENSMUSG00000038848Ythdf19671.705Mus_musculus
ENSHBUG00000011284ythdf19872.125MGP_PahariEiJ_G0026237Ythdf19671.705Mus_pahari
ENSHBUG00000011284ythdf19872.125MGP_SPRETEiJ_G0025715Ythdf19671.705Mus_spretus
ENSHBUG00000011284ythdf19367.748ENSMPUG00000008111YTHDF19670.923Mustela_putorius_furo
ENSHBUG00000011284ythdf19672.420ENSMLUG00000002241YTHDF19372.514Myotis_lucifugus
ENSHBUG00000011284ythdf19872.648ENSNGAG00000000334Ythdf19672.232Nannospalax_galili
ENSHBUG00000011284ythdf19599.157ENSNBRG00000008213ythdf19899.157Neolamprologus_brichardi
ENSHBUG00000011284ythdf19777.391ENSNBRG00000015321YTHDF19777.815Neolamprologus_brichardi
ENSHBUG00000011284ythdf19666.367ENSOPRG00000001758-9866.728Ochotona_princeps
ENSHBUG00000011284ythdf19757.785ENSODEG00000000074-9558.392Octodon_degus
ENSHBUG00000011284ythdf19870.979ENSODEG00000004380-9670.951Octodon_degus
ENSHBUG00000011284ythdf19798.911ENSONIG00000016799ythdf19999.286Oreochromis_niloticus
ENSHBUG00000011284ythdf19873.473ENSOANG00000003723YTHDF19672.663Ornithorhynchus_anatinus
ENSHBUG00000011284ythdf19789.674ENSORLG00000014665YTHDF19988.689Oryzias_latipes
ENSHBUG00000011284ythdf19976.198ENSORLG00000009739YTHDF19977.023Oryzias_latipes
ENSHBUG00000011284ythdf19889.587ENSORLG00020000307ythdf19989.655Oryzias_latipes_hni
ENSHBUG00000011284ythdf19976.159ENSORLG00020001332YTHDF19977.398Oryzias_latipes_hni
ENSHBUG00000011284ythdf19975.868ENSORLG00015018321YTHDF19976.699Oryzias_latipes_hsok
ENSHBUG00000011284ythdf19888.997ENSORLG00015006302ythdf19989.525Oryzias_latipes_hsok
ENSHBUG00000011284ythdf19791.433ENSOMEG00000002941YTHDF19990.939Oryzias_melastigma
ENSHBUG00000011284ythdf19976.987ENSOMEG00000011843YTHDF19976.861Oryzias_melastigma
ENSHBUG00000011284ythdf19869.444ENSOGAG00000000480YTHDF19670.629Otolemur_garnettii
ENSHBUG00000011284ythdf19568.603ENSOARG00000011639YTHDF19368.231Ovis_aries
ENSHBUG00000011284ythdf19772.968ENSPPAG00000023277YTHDF19572.545Pan_paniscus
ENSHBUG00000011284ythdf19770.723ENSPPRG00000020805YTHDF19671.781Panthera_pardus
ENSHBUG00000011284ythdf18081.081ENSPTIG00000017355YTHDF19279.730Panthera_tigris_altaica
ENSHBUG00000011284ythdf19772.968ENSPTRG00000013730YTHDF19671.429Pan_troglodytes
ENSHBUG00000011284ythdf19871.030ENSPANG00000021472YTHDF19671.781Papio_anubis
ENSHBUG00000011284ythdf19972.007ENSPKIG00000005026YTHDF19672.270Paramormyrops_kingsleyae
ENSHBUG00000011284ythdf19970.962ENSPKIG00000005427ythdf19671.254Paramormyrops_kingsleyae
ENSHBUG00000011284ythdf19774.600ENSPSIG00000005529YTHDF19571.930Pelodiscus_sinensis
ENSHBUG00000011284ythdf19677.055ENSPMGG00000009101YTHDF19779.086Periophthalmus_magnuspinnatus
ENSHBUG00000011284ythdf19585.739ENSPMGG00000015328ythdf19687.324Periophthalmus_magnuspinnatus
ENSHBUG00000011284ythdf19773.357ENSPEMG00000020199Ythdf19672.645Peromyscus_maniculatus_bairdii
ENSHBUG00000011284ythdf110073.208ENSPCIG00000017170YTHDF19674.409Phascolarctos_cinereus
ENSHBUG00000011284ythdf19790.132ENSPFOG00000005405ythdf19989.803Poecilia_formosa
ENSHBUG00000011284ythdf19790.132ENSPLAG00000006653ythdf19989.803Poecilia_latipinna
ENSHBUG00000011284ythdf19975.980ENSPLAG00000006298YTHDF19977.120Poecilia_latipinna
ENSHBUG00000011284ythdf19975.980ENSPMEG00000020969-9977.120Poecilia_mexicana
ENSHBUG00000011284ythdf19789.163ENSPMEG00000023753ythdf19989.327Poecilia_mexicana
ENSHBUG00000011284ythdf19876.080ENSPREG00000017662YTHDF19877.318Poecilia_reticulata
ENSHBUG00000011284ythdf19790.132ENSPREG00000002173ythdf19989.803Poecilia_reticulata
ENSHBUG00000011284ythdf18492.265ENSPPYG00000011226YTHDF19592.655Pongo_abelii
ENSHBUG00000011284ythdf19269.540ENSPCAG00000002452YTHDF19870.874Procavia_capensis
ENSHBUG00000011284ythdf19871.154ENSPCOG00000025969YTHDF19671.429Propithecus_coquereli
ENSHBUG00000011284ythdf19767.080ENSPVAG00000017568YTHDF19767.652Pteropus_vampyrus
ENSHBUG00000011284ythdf1100100.000ENSPNYG00000014007ythdf1100100.000Pundamilia_nyererei
ENSHBUG00000011284ythdf19975.777ENSPNYG00000002266YTHDF19977.398Pundamilia_nyererei
ENSHBUG00000011284ythdf19784.919ENSPNAG00000012447ythdf19983.361Pygocentrus_nattereri
ENSHBUG00000011284ythdf19872.426ENSRNOG00000027015Ythdf19671.880Rattus_norvegicus
ENSHBUG00000011284ythdf19870.157ENSRBIG00000044959YTHDF19670.899Rhinopithecus_bieti
ENSHBUG00000011284ythdf19870.157ENSRROG00000033014YTHDF19670.899Rhinopithecus_roxellana
ENSHBUG00000011284ythdf19670.714ENSSBOG00000027278YTHDF19671.260Saimiri_boliviensis_boliviensis
ENSHBUG00000011284ythdf19674.368ENSSHAG00000010430YTHDF18572.615Sarcophilus_harrisii
ENSHBUG00000011284ythdf19976.068ENSSFOG00015000284ythdf19975.896Scleropages_formosus
ENSHBUG00000011284ythdf17497.452ENSSMAG00000013715ythdf19391.698Scophthalmus_maximus
ENSHBUG00000011284ythdf19977.665ENSSMAG00000007635YTHDF19877.036Scophthalmus_maximus
ENSHBUG00000011284ythdf19579.032ENSSDUG00000015823YTHDF19975.507Seriola_dumerili
ENSHBUG00000011284ythdf19793.984ENSSDUG00000000435ythdf19993.659Seriola_dumerili
ENSHBUG00000011284ythdf19894.194ENSSLDG00000024948ythdf110094.194Seriola_lalandi_dorsalis
ENSHBUG00000011284ythdf19974.639ENSSLDG00000001054YTHDF19976.220Seriola_lalandi_dorsalis
ENSHBUG00000011284ythdf19371.048ENSSPUG00000015143YTHDF19673.228Sphenodon_punctatus
ENSHBUG00000011284ythdf19793.569ENSSPAG00000014989ythdf19993.569Stegastes_partitus
ENSHBUG00000011284ythdf19975.693ENSSPAG00000003666YTHDF19976.800Stegastes_partitus
ENSHBUG00000011284ythdf19870.157ENSSSCG00000040086YTHDF19669.947Sus_scrofa
ENSHBUG00000011284ythdf19672.222ENSTGUG00000007565YTHDF19573.091Taeniopygia_guttata
ENSHBUG00000011284ythdf19774.007ENSTRUG00000005049YTHDF19776.549Takifugu_rubripes
ENSHBUG00000011284ythdf19391.938ENSTRUG00000004288ythdf19790.051Takifugu_rubripes
ENSHBUG00000011284ythdf19775.044ENSTNIG00000003975YTHDF19674.740Tetraodon_nigroviridis
ENSHBUG00000011284ythdf19782.056ENSTNIG00000012490ythdf19683.276Tetraodon_nigroviridis
ENSHBUG00000011284ythdf19969.588ENSTTRG00000001804YTHDF19770.370Tursiops_truncatus
ENSHBUG00000011284ythdf19670.693ENSUAMG00000011021YTHDF19673.031Ursus_americanus
ENSHBUG00000011284ythdf18872.125ENSUMAG00000022290YTHDF19672.835Ursus_maritimus
ENSHBUG00000011284ythdf18872.515ENSVVUG00000015275YTHDF19672.835Vulpes_vulpes
ENSHBUG00000011284ythdf19872.884ENSXETG00000027086ythdf19473.835Xenopus_tropicalis
ENSHBUG00000011284ythdf19887.566ENSXCOG00000002490ythdf19387.102Xiphophorus_couchianus
ENSHBUG00000011284ythdf19876.461ENSXCOG00000008115YTHDF19977.265Xiphophorus_couchianus
ENSHBUG00000011284ythdf19976.307ENSXMAG00000015644YTHDF19977.120Xiphophorus_maculatus
ENSHBUG00000011284ythdf19790.774ENSXMAG00000008525ythdf19990.445Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us