EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011326 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3647 bases
Position: chrJH425626.1:45373-49019
Accession: 102289851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000027868	RRM_1	PF00076.22	1e-31	1	2
ENSHBUP00000027868	RRM_1	PF00076.22	1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016476	-	1074	XM_005941117	ENSHBUP00000027868	357 (aa)	XP_005941179	-

Gene Model

Click here to download ENSHBUG00000011326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011326	-	50	40.000	ENSHBUG00000019320	srsf9	73	40.526
ENSHBUG00000011326	-	66	77.966	ENSHBUG00000006386	-	97	69.355
ENSHBUG00000011326	-	63	38.261	ENSHBUG00000016788	srsf1a	88	36.437
ENSHBUG00000011326	-	51	43.750	ENSHBUG00000015576	-	68	45.977
ENSHBUG00000011326	-	62	53.712	ENSHBUG00000014048	srsf5a	63	65.591
ENSHBUG00000011326	-	50	63.536	ENSHBUG00000012462	srsf5b	90	59.677

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011326	-	76	66.544	ENSG00000116350	SRSF4	53	95.833	Homo_sapiens
ENSHBUG00000011326	-	51	85.635	ENSAPOG00000023399	-	60	84.530	Acanthochromis_polyacanthus
ENSHBUG00000011326	-	51	76.374	ENSACIG00000018649	srsf4	90	73.016	Amphilophus_citrinellus
ENSHBUG00000011326	-	85	96.040	ENSACLG00000021269	-	85	95.098	Astatotilapia_calliptera
ENSHBUG00000011326	-	88	56.329	ENSACLG00000003395	srsf4	68	78.142	Astatotilapia_calliptera
ENSHBUG00000011326	-	68	62.097	ENSAMXG00000034811	srsf4	75	76.316	Astyanax_mexicanus
ENSHBUG00000011326	-	50	51.010	WBGene00004698	rsp-1	95	53.571	Caenorhabditis_elegans
ENSHBUG00000011326	-	50	58.500	ENSCING00000012370	-	68	59.701	Ciona_intestinalis
ENSHBUG00000011326	-	50	49.744	ENSCING00000011362	-	65	52.717	Ciona_intestinalis
ENSHBUG00000011326	-	50	54.872	ENSCING00000020631	-	79	57.292	Ciona_intestinalis
ENSHBUG00000011326	-	83	40.751	ENSCING00000024718	-	56	58.031	Ciona_intestinalis
ENSHBUG00000011326	-	50	62.567	ENSCSAVG00000002581	-	70	61.957	Ciona_savignyi
ENSHBUG00000011326	-	51	75.676	ENSCSEG00000010058	srsf4	75	75.397	Cynoglossus_semilaevis
ENSHBUG00000011326	-	51	68.421	ENSDARG00000105293	srsf4	72	75.000	Danio_rerio
ENSHBUG00000011326	-	50	64.835	FBgn0004587	B52	96	62.308	Drosophila_melanogaster
ENSHBUG00000011326	-	54	57.619	ENSEBUG00000001681	srsf4	67	62.983	Eptatretus_burgeri
ENSHBUG00000011326	-	77	51.592	ENSELUG00000017551	srsf4	93	67.692	Esox_lucius
ENSHBUG00000011326	-	51	81.319	ENSFALG00000001346	SRSF4	63	60.312	Ficedula_albicollis
ENSHBUG00000011326	-	73	53.558	ENSFHEG00000007472	srsf4	82	81.579	Fundulus_heteroclitus
ENSHBUG00000011326	-	70	60.232	ENSGAFG00000018496	srsf4	65	70.166	Gambusia_affinis
ENSHBUG00000011326	-	51	76.630	ENSGACG00000002389	srsf4	55	75.824	Gasterosteus_aculeatus
ENSHBUG00000011326	-	51	79.891	ENSHGLG00000011842	SRSF4	61	57.798	Heterocephalus_glaber_female
ENSHBUG00000011326	-	51	79.891	ENSHGLG00100017279	SRSF4	61	57.798	Heterocephalus_glaber_male
ENSHBUG00000011326	-	74	80.303	ENSHCOG00000012540	srsf4	68	74.317	Hippocampus_comes
ENSHBUG00000011326	-	51	66.351	ENSKMAG00000013631	srsf4	81	65.714	Kryptolebias_marmoratus
ENSHBUG00000011326	-	50	88.950	ENSLOCG00000001442	-	93	67.246	Lepisosteus_oculatus
ENSHBUG00000011326	-	51	77.473	ENSMAMG00000004888	srsf4	99	50.000	Mastacembelus_armatus
ENSHBUG00000011326	-	88	56.329	ENSMZEG00005026275	srsf4	68	78.142	Maylandia_zebra
ENSHBUG00000011326	-	51	79.891	ENSMICG00000043567	SRSF4	61	58.104	Microcebus_murinus
ENSHBUG00000011326	-	67	62.451	ENSMMOG00000013653	srsf4	65	70.330	Mola_mola
ENSHBUG00000011326	-	51	80.435	ENSMODG00000011052	SRSF4	55	78.075	Monodelphis_domestica
ENSHBUG00000011326	-	62	70.455	ENSMALG00000013392	srsf4	66	75.275	Monopterus_albus
ENSHBUG00000011326	-	51	79.891	ENSOCUG00000001837	SRSF4	64	58.383	Oryctolagus_cuniculus
ENSHBUG00000011326	-	51	76.374	ENSORLG00020016052	srsf4	66	77.473	Oryzias_latipes_hni
ENSHBUG00000011326	-	51	76.374	ENSORLG00015007566	srsf4	70	77.473	Oryzias_latipes_hsok
ENSHBUG00000011326	-	63	61.333	ENSPMAG00000009397	srsf4	68	69.231	Petromyzon_marinus
ENSHBUG00000011326	-	95	58.427	ENSPLAG00000008812	srsf4	64	68.681	Poecilia_latipinna
ENSHBUG00000011326	-	51	75.393	ENSPMEG00000023638	srsf4	53	76.374	Poecilia_mexicana
ENSHBUG00000011326	-	51	76.923	ENSPREG00000009639	srsf4	50	76.374	Poecilia_reticulata
ENSHBUG00000011326	-	51	78.571	ENSPNYG00000003796	srsf4	56	79.121	Pundamilia_nyererei
ENSHBUG00000011326	-	97	55.143	ENSPNAG00000023844	srsf4	53	72.527	Pygocentrus_nattereri
ENSHBUG00000011326	-	83	53.517	ENSSHAG00000012407	SRSF4	50	77.564	Sarcophilus_harrisii
ENSHBUG00000011326	-	51	74.317	ENSSFOG00015020292	srsf4	82	68.908	Scleropages_formosus
ENSHBUG00000011326	-	51	76.923	ENSSMAG00000001707	srsf4	50	76.923	Scophthalmus_maximus
ENSHBUG00000011326	-	89	56.782	ENSSDUG00000007387	srsf4	54	76.923	Seriola_dumerili
ENSHBUG00000011326	-	51	63.934	ENSSLDG00000009745	srsf4	61	62.842	Seriola_lalandi_dorsalis
ENSHBUG00000011326	-	81	76.812	ENSSPAG00000014538	srsf4	83	73.016	Stegastes_partitus
ENSHBUG00000011326	-	51	79.891	ENSUAMG00000006106	SRSF4	61	59.748	Ursus_americanus
ENSHBUG00000011326	-	86	80.312	ENSXCOG00000003212	-	93	80.251	Xiphophorus_couchianus
ENSHBUG00000011326	-	51	75.393	ENSXCOG00000018826	srsf4	89	71.429	Xiphophorus_couchianus