EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000011598 (Gene tree)
Gene ID: 102292985
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 13054 bases
Position: chrJH426330.1:16578-29631
Accession: 102292985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010067	KH_1	PF00013.29	3.8e-06	1	1
ENSHBUP00000010067	zf-CCHC	PF00098.23	0.00052	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016822	-	3224	XM_014330709	ENSHBUP00000010067	680 (aa)	XP_014186195	UPI0006C94DE1

Gene Model

Click here to download ENSHBUG00000011598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011598	sf1	97	93.363	ENSAPOG00000012341	sf1	67	92.544	Acanthochromis_polyacanthus
ENSHBUG00000011598	sf1	97	87.632	ENSACIG00000016514	sf1	97	90.347	Amphilophus_citrinellus
ENSHBUG00000011598	sf1	97	93.656	ENSAOCG00000010934	sf1	67	92.763	Amphiprion_ocellaris
ENSHBUG00000011598	sf1	97	93.656	ENSAPEG00000009498	sf1	67	92.763	Amphiprion_percula
ENSHBUG00000011598	sf1	67	91.009	ENSATEG00000001894	sf1	67	91.685	Anabas_testudineus
ENSHBUG00000011598	sf1	84	66.285	ENSANAG00000022607	-	88	74.263	Aotus_nancymaae
ENSHBUG00000011598	sf1	61	77.570	ENSANAG00000026664	-	89	82.895	Aotus_nancymaae
ENSHBUG00000011598	sf1	100	94.273	ENSACLG00000007633	sf1	100	94.273	Astatotilapia_calliptera
ENSHBUG00000011598	sf1	67	83.878	ENSAMXG00000003630	sf1	59	83.589	Astyanax_mexicanus
ENSHBUG00000011598	sf1	61	77.262	ENSBTAG00000001035	SF1	61	82.895	Bos_taurus
ENSHBUG00000011598	sf1	61	77.262	ENSCJAG00000002780	SF1	58	82.895	Callithrix_jacchus
ENSHBUG00000011598	sf1	61	77.262	ENSCAFG00000014239	SF1	58	82.632	Canis_familiaris
ENSHBUG00000011598	sf1	61	77.262	ENSCAFG00020014381	SF1	58	82.895	Canis_lupus_dingo
ENSHBUG00000011598	sf1	61	77.262	ENSCHIG00000025867	SF1	58	82.895	Capra_hircus
ENSHBUG00000011598	sf1	59	78.897	ENSCAPG00000010762	SF1	65	83.733	Cavia_aperea
ENSHBUG00000011598	sf1	59	71.602	ENSCCAG00000023781	-	82	73.158	Cebus_capucinus
ENSHBUG00000011598	sf1	61	77.262	ENSCCAG00000037881	SF1	89	82.895	Cebus_capucinus
ENSHBUG00000011598	sf1	61	77.262	ENSCATG00000011564	SF1	89	82.895	Cercocebus_atys
ENSHBUG00000011598	sf1	56	73.383	ENSCHOG00000006008	SF1	66	77.222	Choloepus_hoffmanni
ENSHBUG00000011598	sf1	60	56.028	ENSCING00000005564	-	92	53.996	Ciona_intestinalis
ENSHBUG00000011598	sf1	58	53.461	ENSCSAVG00000009055	-	72	61.639	Ciona_savignyi
ENSHBUG00000011598	sf1	61	77.262	ENSCANG00000042201	SF1	89	82.895	Colobus_angolensis_palliatus
ENSHBUG00000011598	sf1	61	77.494	ENSCGRG00001003677	Sf1	65	83.421	Cricetulus_griseus_chok1gshd
ENSHBUG00000011598	sf1	59	77.069	ENSCGRG00000001708	Sf1	65	83.733	Cricetulus_griseus_crigri
ENSHBUG00000011598	sf1	98	88.421	ENSCSEG00000014375	sf1	65	88.840	Cynoglossus_semilaevis
ENSHBUG00000011598	sf1	98	90.390	ENSCVAG00000001670	sf1	67	91.648	Cyprinodon_variegatus
ENSHBUG00000011598	sf1	85	82.646	ENSDARG00000008188	sf1	65	91.599	Danio_rerio
ENSHBUG00000011598	sf1	61	77.262	ENSDORG00000016334	Sf1	58	82.895	Dipodomys_ordii
ENSHBUG00000011598	sf1	59	72.705	ENSETEG00000012830	SF1	51	75.881	Echinops_telfairi
ENSHBUG00000011598	sf1	53	77.984	ENSEEUG00000001058	SF1	83	83.284	Erinaceus_europaeus
ENSHBUG00000011598	sf1	78	78.810	ENSELUG00000013225	sf1	60	84.632	Esox_lucius
ENSHBUG00000011598	sf1	61	77.262	ENSFCAG00000012231	SF1	58	82.632	Felis_catus
ENSHBUG00000011598	sf1	59	78.657	ENSFDAG00000009833	SF1	65	83.200	Fukomys_damarensis
ENSHBUG00000011598	sf1	67	89.934	ENSFHEG00000022656	sf1	67	89.059	Fundulus_heteroclitus
ENSHBUG00000011598	sf1	72	76.423	ENSGMOG00000007469	sf1	61	94.595	Gadus_morhua
ENSHBUG00000011598	sf1	89	88.834	ENSGAFG00000019284	sf1	74	90.330	Gambusia_affinis
ENSHBUG00000011598	sf1	62	80.324	ENSGAGG00000021691	SF1	68	71.193	Gopherus_agassizii
ENSHBUG00000011598	sf1	61	77.262	ENSHGLG00000009541	SF1	65	82.895	Heterocephalus_glaber_female
ENSHBUG00000011598	sf1	56	74.346	ENSHGLG00100008076	-	68	78.070	Heterocephalus_glaber_male
ENSHBUG00000011598	sf1	55	71.707	ENSHGLG00100008255	-	70	78.125	Heterocephalus_glaber_male
ENSHBUG00000011598	sf1	59	78.657	ENSHGLG00100013879	-	65	83.200	Heterocephalus_glaber_male
ENSHBUG00000011598	sf1	70	85.654	ENSHCOG00000011388	sf1	68	87.500	Hippocampus_comes
ENSHBUG00000011598	sf1	59	78.657	ENSSTOG00000009790	-	58	83.200	Ictidomys_tridecemlineatus
ENSHBUG00000011598	sf1	55	70.649	ENSSTOG00000024353	-	67	73.158	Ictidomys_tridecemlineatus
ENSHBUG00000011598	sf1	61	77.494	ENSJJAG00000011788	Sf1	58	83.158	Jaculus_jaculus
ENSHBUG00000011598	sf1	67	89.325	ENSKMAG00000005854	sf1	70	89.278	Kryptolebias_marmoratus
ENSHBUG00000011598	sf1	83	87.905	ENSLBEG00000019836	sf1	72	88.720	Labrus_bergylta
ENSHBUG00000011598	sf1	60	78.155	ENSLACG00000018493	SF1	68	79.200	Latimeria_chalumnae
ENSHBUG00000011598	sf1	67	79.915	ENSLOCG00000002130	sf1	72	79.957	Lepisosteus_oculatus
ENSHBUG00000011598	sf1	59	80.723	ENSLAFG00000007201	SF1	63	84.309	Loxodonta_africana
ENSHBUG00000011598	sf1	61	77.262	ENSMFAG00000033122	SF1	89	82.895	Macaca_fascicularis
ENSHBUG00000011598	sf1	61	77.262	ENSMMUG00000022606	SF1	90	82.632	Macaca_mulatta
ENSHBUG00000011598	sf1	61	77.262	ENSMNEG00000037901	SF1	89	82.895	Macaca_nemestrina
ENSHBUG00000011598	sf1	59	78.199	ENSMLEG00000040706	SF1	90	82.245	Mandrillus_leucophaeus
ENSHBUG00000011598	sf1	67	93.421	ENSMAMG00000001780	sf1	67	93.435	Mastacembelus_armatus
ENSHBUG00000011598	sf1	100	99.853	ENSMZEG00005009196	sf1	100	99.853	Maylandia_zebra
ENSHBUG00000011598	sf1	61	75.973	ENSMAUG00000014064	Sf1	65	83.421	Mesocricetus_auratus
ENSHBUG00000011598	sf1	61	77.262	ENSMICG00000001202	SF1	89	82.677	Microcebus_murinus
ENSHBUG00000011598	sf1	61	77.262	ENSMOCG00000022038	Sf1	65	83.421	Microtus_ochrogaster
ENSHBUG00000011598	sf1	67	88.816	ENSMMOG00000020474	sf1	67	88.184	Mola_mola
ENSHBUG00000011598	sf1	59	76.690	ENSMODG00000029407	SF1	80	82.895	Monodelphis_domestica
ENSHBUG00000011598	sf1	67	86.404	ENSMALG00000020521	sf1	73	86.433	Monopterus_albus
ENSHBUG00000011598	sf1	61	75.973	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSHBUG00000011598	sf1	61	75.973	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSHBUG00000011598	sf1	61	75.973	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSHBUG00000011598	sf1	61	75.973	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSHBUG00000011598	sf1	59	76.869	ENSMPUG00000012684	SF1	58	82.895	Mustela_putorius_furo
ENSHBUG00000011598	sf1	59	77.103	ENSMLUG00000015217	-	58	82.895	Myotis_lucifugus
ENSHBUG00000011598	sf1	64	73.043	ENSMLUG00000029800	-	64	79.211	Myotis_lucifugus
ENSHBUG00000011598	sf1	61	77.494	ENSNGAG00000005550	Sf1	65	83.158	Nannospalax_galili
ENSHBUG00000011598	sf1	100	93.833	ENSNBRG00000017606	sf1	100	93.833	Neolamprologus_brichardi
ENSHBUG00000011598	sf1	61	77.494	ENSNLEG00000005236	-	89	82.895	Nomascus_leucogenys
ENSHBUG00000011598	sf1	58	76.905	ENSMEUG00000013424	SF1	69	83.065	Notamacropus_eugenii
ENSHBUG00000011598	sf1	100	99.559	ENSONIG00000015728	sf1	100	99.559	Oreochromis_niloticus
ENSHBUG00000011598	sf1	59	78.436	ENSOCUG00000026486	SF1	59	82.632	Oryctolagus_cuniculus
ENSHBUG00000011598	sf1	69	87.983	ENSORLG00000011853	sf1	66	88.326	Oryzias_latipes
ENSHBUG00000011598	sf1	69	88.412	ENSORLG00020011834	sf1	66	88.546	Oryzias_latipes_hni
ENSHBUG00000011598	sf1	67	87.965	ENSORLG00015012855	sf1	66	87.885	Oryzias_latipes_hsok
ENSHBUG00000011598	sf1	67	89.956	ENSOMEG00000005210	sf1	67	89.890	Oryzias_melastigma
ENSHBUG00000011598	sf1	61	77.262	ENSOGAG00000016196	SF1	58	82.632	Otolemur_garnettii
ENSHBUG00000011598	sf1	61	77.262	ENSOARG00000009166	SF1	65	82.632	Ovis_aries
ENSHBUG00000011598	sf1	59	79.616	ENSPPAG00000002799	-	90	82.895	Pan_paniscus
ENSHBUG00000011598	sf1	59	78.657	ENSPPRG00000013566	SF1	58	83.978	Panthera_pardus
ENSHBUG00000011598	sf1	59	78.436	ENSPTIG00000016141	SF1	67	82.895	Panthera_tigris_altaica
ENSHBUG00000011598	sf1	61	78.322	ENSPTRG00000003846	SF1	89	82.895	Pan_troglodytes
ENSHBUG00000011598	sf1	61	77.030	ENSPANG00000020754	SF1	89	82.895	Papio_anubis
ENSHBUG00000011598	sf1	61	75.973	ENSPEMG00000010463	Sf1	65	83.421	Peromyscus_maniculatus_bairdii
ENSHBUG00000011598	sf1	61	76.869	ENSPCIG00000018173	SF1	60	82.632	Phascolarctos_cinereus
ENSHBUG00000011598	sf1	97	89.879	ENSPFOG00000013683	sf1	67	90.769	Poecilia_formosa
ENSHBUG00000011598	sf1	90	89.286	ENSPLAG00000018076	sf1	62	90.220	Poecilia_latipinna
ENSHBUG00000011598	sf1	97	89.879	ENSPMEG00000005726	sf1	67	90.769	Poecilia_mexicana
ENSHBUG00000011598	sf1	97	89.426	ENSPREG00000004155	sf1	67	89.890	Poecilia_reticulata
ENSHBUG00000011598	sf1	61	77.262	ENSPPYG00000003098	-	70	82.632	Pongo_abelii
ENSHBUG00000011598	sf1	59	77.962	ENSPCAG00000013631	SF1	75	66.288	Procavia_capensis
ENSHBUG00000011598	sf1	61	77.262	ENSPCOG00000027546	SF1	89	82.677	Propithecus_coquereli
ENSHBUG00000011598	sf1	61	76.256	ENSPVAG00000016938	SF1	75	69.034	Pteropus_vampyrus
ENSHBUG00000011598	sf1	100	99.559	ENSPNYG00000004673	sf1	100	99.559	Pundamilia_nyererei
ENSHBUG00000011598	sf1	67	83.624	ENSPNAG00000013072	sf1	67	83.553	Pygocentrus_nattereri
ENSHBUG00000011598	sf1	61	75.973	ENSRNOG00000021085	Sf1	58	83.421	Rattus_norvegicus
ENSHBUG00000011598	sf1	61	77.262	ENSRBIG00000042818	SF1	89	82.895	Rhinopithecus_bieti
ENSHBUG00000011598	sf1	60	77.570	ENSRROG00000045655	SF1	90	82.245	Rhinopithecus_roxellana
ENSHBUG00000011598	sf1	80	65.749	ENSSBOG00000022267	-	84	72.779	Saimiri_boliviensis_boliviensis
ENSHBUG00000011598	sf1	72	71.717	ENSSHAG00000006841	SF1	68	84.718	Sarcophilus_harrisii
ENSHBUG00000011598	sf1	71	80.493	ENSSFOG00015021978	sf1	66	82.018	Scleropages_formosus
ENSHBUG00000011598	sf1	84	87.780	ENSSMAG00000007549	sf1	70	89.542	Scophthalmus_maximus
ENSHBUG00000011598	sf1	67	92.123	ENSSDUG00000003903	sf1	70	93.668	Seriola_dumerili
ENSHBUG00000011598	sf1	59	73.861	ENSSARG00000008180	SF1	71	78.133	Sorex_araneus
ENSHBUG00000011598	sf1	59	79.953	ENSSPUG00000012907	SF1	58	85.634	Sphenodon_punctatus
ENSHBUG00000011598	sf1	97	93.807	ENSSPAG00000019060	sf1	67	93.640	Stegastes_partitus
ENSHBUG00000011598	sf1	61	75.973	ENSSSCG00000013021	SF1	58	82.895	Sus_scrofa
ENSHBUG00000011598	sf1	73	71.349	ENSTNIG00000004820	sf1	72	77.892	Tetraodon_nigroviridis
ENSHBUG00000011598	sf1	59	73.580	ENSTBEG00000013133	SF1	62	66.452	Tupaia_belangeri
ENSHBUG00000011598	sf1	59	80.964	ENSUMAG00000007268	SF1	69	82.895	Ursus_maritimus
ENSHBUG00000011598	sf1	85	72.326	ENSXETG00000008434	sf1	62	85.675	Xenopus_tropicalis
ENSHBUG00000011598	sf1	71	86.948	ENSXCOG00000003704	sf1	69	92.857	Xiphophorus_couchianus
ENSHBUG00000011598	sf1	97	89.426	ENSXMAG00000007822	sf1	70	90.789	Xiphophorus_maculatus