EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011610 (Gene tree)
Gene ID: 102291235
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5443 bases
Position: chrJH426330.1:11115-16557
Accession: 102291235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010074	zf-CCHC	PF00098.23	5.1e-08	1	1
ENSHBUP00000028059	zf-CCHC	PF00098.23	5.1e-08	1	1
ENSHBUP00000010074	RRM_5	PF13893.6	7.5e-08	1	1
ENSHBUP00000028059	RRM_5	PF13893.6	7.5e-08	1	1
ENSHBUP00000010074	RRM_1	PF00076.22	8.1e-31	1	2
ENSHBUP00000010074	RRM_1	PF00076.22	8.1e-31	2	2
ENSHBUP00000028059	RRM_1	PF00076.22	8.1e-31	1	2
ENSHBUP00000028059	RRM_1	PF00076.22	8.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016851	-	4141	XM_005951260	ENSHBUP00000010074	419 (aa)	XP_005951322	UPI00032982BB
ENSHBUT00000016845	-	4095	XM_005951263	ENSHBUP00000028059	419 (aa)	XP_005951325	UPI00032982BB

Gene Model

Click here to download ENSHBUG00000011610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011610's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011610	rbm4.1	66	56.667	ENSHBUG00000009020	-	94	50.829
ENSHBUG00000011610	rbm4.1	66	54.667	ENSHBUG00000009051	rbm4.3	86	54.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011610	rbm4.1	100	90.736	ENSAPOG00000012353	rbm4.1	100	90.736	Acanthochromis_polyacanthus
ENSHBUG00000011610	rbm4.1	100	97.375	ENSACIG00000016482	rbm4.1	100	97.375	Amphilophus_citrinellus
ENSHBUG00000011610	rbm4.1	100	91.924	ENSAOCG00000010915	rbm4.1	100	91.924	Amphiprion_ocellaris
ENSHBUG00000011610	rbm4.1	100	91.924	ENSAPEG00000009494	rbm4.1	100	91.924	Amphiprion_percula
ENSHBUG00000011610	rbm4.1	100	90.736	ENSATEG00000001904	rbm4.1	100	90.736	Anabas_testudineus
ENSHBUG00000011610	rbm4.1	99	47.002	ENSACLG00000007740	-	99	44.731	Astatotilapia_calliptera
ENSHBUG00000011610	rbm4.1	100	100.000	ENSACLG00000007722	rbm4.1	100	100.000	Astatotilapia_calliptera
ENSHBUG00000011610	rbm4.1	100	59.242	ENSAMXG00000036611	rbm4.1	100	62.559	Astyanax_mexicanus
ENSHBUG00000011610	rbm4.1	99	48.936	ENSCSEG00000014359	-	97	48.086	Cynoglossus_semilaevis
ENSHBUG00000011610	rbm4.1	100	74.224	ENSCSEG00000014365	rbm4.1	100	74.224	Cynoglossus_semilaevis
ENSHBUG00000011610	rbm4.1	100	78.385	ENSCVAG00000019349	rbm4.1	100	78.385	Cyprinodon_variegatus
ENSHBUG00000011610	rbm4.1	100	51.415	ENSDARG00000055080	rbm4.2	100	51.878	Danio_rerio
ENSHBUG00000011610	rbm4.1	100	70.213	ENSDARG00000036386	rbm4.1	100	69.740	Danio_rerio
ENSHBUG00000011610	rbm4.1	100	65.802	ENSELUG00000013205	rbm4.1	100	63.761	Esox_lucius
ENSHBUG00000011610	rbm4.1	100	79.147	ENSFHEG00000022926	rbm4.1	100	78.910	Fundulus_heteroclitus
ENSHBUG00000011610	rbm4.1	100	67.371	ENSGMOG00000007464	rbm4.1	100	68.868	Gadus_morhua
ENSHBUG00000011610	rbm4.1	92	51.276	ENSGMOG00000007455	-	96	49.640	Gadus_morhua
ENSHBUG00000011610	rbm4.1	100	77.069	ENSGAFG00000019302	rbm4.1	100	76.596	Gambusia_affinis
ENSHBUG00000011610	rbm4.1	100	77.962	ENSGACG00000000822	rbm4.1	100	77.962	Gasterosteus_aculeatus
ENSHBUG00000011610	rbm4.1	97	49.034	ENSGACG00000000821	-	97	46.620	Gasterosteus_aculeatus
ENSHBUG00000011610	rbm4.1	96	71.253	ENSHCOG00000011403	rbm4.1	99	70.660	Hippocampus_comes
ENSHBUG00000011610	rbm4.1	100	49.409	ENSIPUG00000022937	rbm4.2	100	48.956	Ictalurus_punctatus
ENSHBUG00000011610	rbm4.1	100	62.615	ENSIPUG00000022931	rbm4.1	100	63.699	Ictalurus_punctatus
ENSHBUG00000011610	rbm4.1	100	80.142	ENSKMAG00000006556	rbm4.1	100	80.142	Kryptolebias_marmoratus
ENSHBUG00000011610	rbm4.1	100	84.561	ENSLBEG00000019782	rbm4.1	100	84.561	Labrus_bergylta
ENSHBUG00000011610	rbm4.1	99	48.700	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSHBUG00000011610	rbm4.1	100	91.211	ENSMAMG00000001765	rbm4.1	100	91.211	Mastacembelus_armatus
ENSHBUG00000011610	rbm4.1	98	50.355	ENSMAMG00000001760	-	98	48.571	Mastacembelus_armatus
ENSHBUG00000011610	rbm4.1	100	100.000	ENSMZEG00005009205	rbm4.1	100	100.000	Maylandia_zebra
ENSHBUG00000011610	rbm4.1	100	87.470	ENSMMOG00000020479	rbm4.1	100	86.761	Mola_mola
ENSHBUG00000011610	rbm4.1	98	49.423	ENSMALG00000020557	-	98	48.936	Monopterus_albus
ENSHBUG00000011610	rbm4.1	100	88.599	ENSMALG00000020544	rbm4.1	100	88.599	Monopterus_albus
ENSHBUG00000011610	rbm4.1	100	99.761	ENSNBRG00000017755	rbm4.1	100	99.761	Neolamprologus_brichardi
ENSHBUG00000011610	rbm4.1	100	99.523	ENSONIG00000015730	rbm4.1	100	99.523	Oreochromis_niloticus
ENSHBUG00000011610	rbm4.1	100	78.860	ENSORLG00000012496	rbm4.1	100	78.860	Oryzias_latipes
ENSHBUG00000011610	rbm4.1	100	78.860	ENSORLG00020012454	rbm4.1	100	78.860	Oryzias_latipes_hni
ENSHBUG00000011610	rbm4.1	100	79.097	ENSORLG00015013678	rbm4.1	100	79.097	Oryzias_latipes_hsok
ENSHBUG00000011610	rbm4.1	100	79.810	ENSOMEG00000001001	rbm4.1	100	79.810	Oryzias_melastigma
ENSHBUG00000011610	rbm4.1	100	64.953	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSHBUG00000011610	rbm4.1	99	47.837	ENSPFOG00000012685	-	99	45.902	Poecilia_formosa
ENSHBUG00000011610	rbm4.1	100	77.305	ENSPFOG00000012675	rbm4.1	100	76.832	Poecilia_formosa
ENSHBUG00000011610	rbm4.1	100	77.305	ENSPLAG00000018572	rbm4.1	100	76.832	Poecilia_latipinna
ENSHBUG00000011610	rbm4.1	100	77.305	ENSPMEG00000006290	rbm4.1	100	76.832	Poecilia_mexicana
ENSHBUG00000011610	rbm4.1	100	77.305	ENSPREG00000003724	rbm4.1	100	76.832	Poecilia_reticulata
ENSHBUG00000011610	rbm4.1	99	45.913	ENSPREG00000003764	-	87	65.761	Poecilia_reticulata
ENSHBUG00000011610	rbm4.1	100	100.000	ENSPNYG00000004662	rbm4.1	100	100.000	Pundamilia_nyererei
ENSHBUG00000011610	rbm4.1	100	68.000	ENSPNAG00000002539	rbm4.1	100	68.000	Pygocentrus_nattereri
ENSHBUG00000011610	rbm4.1	100	51.163	ENSPNAG00000013057	rbm4.2	100	51.163	Pygocentrus_nattereri
ENSHBUG00000011610	rbm4.1	100	64.720	ENSSFOG00015021996	sf1	100	64.019	Scleropages_formosus
ENSHBUG00000011610	rbm4.1	100	85.036	ENSSMAG00000007571	rbm4.1	100	83.373	Scophthalmus_maximus
ENSHBUG00000011610	rbm4.1	97	51.675	ENSSDUG00000003936	-	99	49.292	Seriola_dumerili
ENSHBUG00000011610	rbm4.1	100	91.449	ENSSDUG00000003925	rbm4.1	100	91.449	Seriola_dumerili
ENSHBUG00000011610	rbm4.1	97	49.398	ENSSLDG00000013157	-	99	49.176	Seriola_lalandi_dorsalis
ENSHBUG00000011610	rbm4.1	100	91.449	ENSSLDG00000013147	rbm4.1	100	91.449	Seriola_lalandi_dorsalis
ENSHBUG00000011610	rbm4.1	100	90.995	ENSSPAG00000019053	rbm4.1	100	92.891	Stegastes_partitus
ENSHBUG00000011610	rbm4.1	99	48.926	ENSSPAG00000019046	-	99	46.136	Stegastes_partitus
ENSHBUG00000011610	rbm4.1	99	48.317	ENSTRUG00000013328	-	99	46.244	Takifugu_rubripes
ENSHBUG00000011610	rbm4.1	100	79.097	ENSTRUG00000013334	rbm4.1	100	78.147	Takifugu_rubripes
ENSHBUG00000011610	rbm4.1	78	89.216	ENSTNIG00000004821	rbm4.1	97	92.268	Tetraodon_nigroviridis
ENSHBUG00000011610	rbm4.1	100	77.305	ENSXCOG00000003731	rbm4.1	100	76.832	Xiphophorus_couchianus
ENSHBUG00000011610	rbm4.1	99	67.391	ENSXMAG00000008059	-	86	67.391	Xiphophorus_maculatus
ENSHBUG00000011610	rbm4.1	100	77.069	ENSXMAG00000008069	rbm4.1	100	76.596	Xiphophorus_maculatus