EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 2569 bases
Position: chrJH426330.1:6801-9369
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010083	RRM_5	PF13893.6	7.4e-08	1	1
ENSHBUP00000010083	RRM_1	PF00076.22	6.7e-31	1	2
ENSHBUP00000010083	RRM_1	PF00076.22	6.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031558	-	465	-	ENSHBUP00000010083	154 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000011624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011624	-	50	31.250	ENSHBUG00000003073	srsf3b	64	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011624	-	91	89.209	ENSAPOG00000012375	-	95	89.209	Acanthochromis_polyacanthus
ENSHBUG00000011624	-	91	93.525	ENSACIG00000016472	-	85	93.525	Amphilophus_citrinellus
ENSHBUG00000011624	-	91	90.647	ENSAOCG00000010907	-	95	90.647	Amphiprion_ocellaris
ENSHBUG00000011624	-	91	90.647	ENSAPEG00000009476	-	86	90.647	Amphiprion_percula
ENSHBUG00000011624	-	89	90.511	ENSATEG00000001912	-	90	90.511	Anabas_testudineus
ENSHBUG00000011624	-	94	57.931	ENSAMXG00000032121	rbm4.2	91	57.931	Astyanax_mexicanus
ENSHBUG00000011624	-	91	50.725	ENSCPBG00000023666	-	92	50.725	Chrysemys_picta_bellii
ENSHBUG00000011624	-	90	64.748	ENSCSEG00000007739	-	99	64.748	Cynoglossus_semilaevis
ENSHBUG00000011624	-	95	66.883	ENSDARG00000036386	rbm4.1	88	66.883	Danio_rerio
ENSHBUG00000011624	-	90	60.140	ENSEBUG00000007174	-	88	60.140	Eptatretus_burgeri
ENSHBUG00000011624	-	91	82.014	ENSFHEG00000003483	-	91	82.014	Fundulus_heteroclitus
ENSHBUG00000011624	-	91	79.856	ENSGAFG00000019301	-	91	79.856	Gambusia_affinis
ENSHBUG00000011624	-	91	50.725	ENSGAGG00000014558	-	92	50.725	Gopherus_agassizii
ENSHBUG00000011624	-	95	76.623	ENSHCOG00000011413	-	91	76.623	Hippocampus_comes
ENSHBUG00000011624	-	91	88.406	ENSLBEG00000019756	-	86	88.406	Labrus_bergylta
ENSHBUG00000011624	-	91	53.571	ENSLACG00000006343	zgc:77262	52	53.571	Latimeria_chalumnae
ENSHBUG00000011624	-	92	62.411	ENSLOCG00000002772	rbm4.1	95	62.411	Lepisosteus_oculatus
ENSHBUG00000011624	-	90	52.518	ENSMZEG00005028161	-	77	52.518	Maylandia_zebra
ENSHBUG00000011624	-	91	100.000	ENSMZEG00005028160	-	93	100.000	Maylandia_zebra
ENSHBUG00000011624	-	94	89.655	ENSMZEG00005009210	-	81	89.655	Maylandia_zebra
ENSHBUG00000011624	-	91	86.232	ENSMMOG00000020484	-	86	86.232	Mola_mola
ENSHBUG00000011624	-	100	99.351	ENSNBRG00000017763	-	99	99.351	Neolamprologus_brichardi
ENSHBUG00000011624	-	90	69.565	ENSPKIG00000020805	rbm4.1	85	69.565	Paramormyrops_kingsleyae
ENSHBUG00000011624	-	90	65.468	ENSPMGG00000004331	rbm4.1	93	65.468	Periophthalmus_magnuspinnatus
ENSHBUG00000011624	-	90	56.835	ENSPMAG00000003433	rbm4.2	69	56.835	Petromyzon_marinus
ENSHBUG00000011624	-	91	80.435	ENSPLAG00000018569	-	88	80.435	Poecilia_latipinna
ENSHBUG00000011624	-	91	80.435	ENSPMEG00000006278	-	88	80.435	Poecilia_mexicana
ENSHBUG00000011624	-	100	100.000	ENSPNYG00000004649	-	99	100.000	Pundamilia_nyererei
ENSHBUG00000011624	-	96	49.333	ENSSFOG00015018567	zgc:77262	99	49.333	Scleropages_formosus
ENSHBUG00000011624	-	95	83.108	ENSSMAG00000007575	-	95	83.108	Scophthalmus_maximus
ENSHBUG00000011624	-	91	79.856	ENSXCOG00000003730	-	86	79.856	Xiphophorus_couchianus