EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011715 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 13794 bases
Position: chrJH425487.1:301790-315583
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000028115	RVT_1	PF00078.27	9.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000016968	-	1098	-	ENSHBUP00000028115	365 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000011715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011715	-	79	38.217	ENSHBUG00000020868	-	76	38.217
ENSHBUG00000011715	-	71	31.343	ENSHBUG00000003796	-	67	31.343
ENSHBUG00000011715	-	82	30.699	ENSHBUG00000007736	-	78	31.003

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011715	-	61	32.932	ENSAPOG00000015742	-	78	32.932	Acanthochromis_polyacanthus
ENSHBUG00000011715	-	56	30.435	ENSAPOG00000001366	-	63	30.435	Acanthochromis_polyacanthus
ENSHBUG00000011715	-	67	34.457	ENSACIG00000020849	-	70	34.457	Amphilophus_citrinellus
ENSHBUG00000011715	-	79	33.333	ENSACIG00000020856	-	66	33.333	Amphilophus_citrinellus
ENSHBUG00000011715	-	64	36.822	ENSAOCG00000000894	-	83	36.201	Amphiprion_ocellaris
ENSHBUG00000011715	-	72	32.069	ENSAOCG00000014605	-	61	32.069	Amphiprion_ocellaris
ENSHBUG00000011715	-	80	33.333	ENSAOCG00000019069	-	86	33.333	Amphiprion_ocellaris
ENSHBUG00000011715	-	59	31.933	ENSACAG00000010816	-	66	31.933	Anolis_carolinensis
ENSHBUG00000011715	-	90	33.613	ENSACLG00000012857	-	96	33.613	Astatotilapia_calliptera
ENSHBUG00000011715	-	78	80.844	ENSACLG00000011319	-	80	80.844	Astatotilapia_calliptera
ENSHBUG00000011715	-	51	38.679	ENSACLG00000010837	-	52	38.679	Astatotilapia_calliptera
ENSHBUG00000011715	-	88	31.339	ENSACLG00000013571	-	85	31.339	Astatotilapia_calliptera
ENSHBUG00000011715	-	60	39.344	ENSAMXG00000040763	-	61	39.344	Astyanax_mexicanus
ENSHBUG00000011715	-	78	33.876	ENSAMXG00000035718	-	58	33.876	Astyanax_mexicanus
ENSHBUG00000011715	-	60	38.115	ENSAMXG00000041014	-	91	38.115	Astyanax_mexicanus
ENSHBUG00000011715	-	80	32.812	ENSCVAG00000018360	-	76	32.812	Cyprinodon_variegatus
ENSHBUG00000011715	-	81	35.714	ENSELUG00000000386	-	71	35.714	Esox_lucius
ENSHBUG00000011715	-	82	34.985	ENSELUG00000002589	-	68	34.985	Esox_lucius
ENSHBUG00000011715	-	85	34.226	ENSGAGG00000013921	-	90	34.226	Gopherus_agassizii
ENSHBUG00000011715	-	90	33.803	ENSGAGG00000010426	-	50	33.803	Gopherus_agassizii
ENSHBUG00000011715	-	79	32.698	ENSKMAG00000014393	-	73	32.698	Kryptolebias_marmoratus
ENSHBUG00000011715	-	74	35.135	ENSLBEG00000023714	-	78	35.135	Labrus_bergylta
ENSHBUG00000011715	-	76	32.278	ENSLBEG00000020242	-	85	32.278	Labrus_bergylta
ENSHBUG00000011715	-	91	30.663	ENSLBEG00000015758	-	53	30.663	Labrus_bergylta
ENSHBUG00000011715	-	64	32.549	ENSLBEG00000004148	-	54	32.549	Labrus_bergylta
ENSHBUG00000011715	-	90	34.270	ENSLOCG00000000179	-	54	34.270	Lepisosteus_oculatus
ENSHBUG00000011715	-	66	34.082	ENSMZEG00005016362	-	93	34.082	Maylandia_zebra
ENSHBUG00000011715	-	84	31.304	ENSMZEG00005011529	-	64	31.304	Maylandia_zebra
ENSHBUG00000011715	-	89	81.375	ENSMZEG00005025877	-	82	81.375	Maylandia_zebra
ENSHBUG00000011715	-	89	81.375	ENSMZEG00005008304	-	82	81.375	Maylandia_zebra
ENSHBUG00000011715	-	84	31.304	ENSMZEG00005017030	-	64	31.304	Maylandia_zebra
ENSHBUG00000011715	-	75	32.997	ENSNBRG00000000972	-	73	32.997	Neolamprologus_brichardi
ENSHBUG00000011715	-	62	34.000	ENSNBRG00000022130	-	60	34.000	Neolamprologus_brichardi
ENSHBUG00000011715	-	61	31.579	ENSNBRG00000013792	-	70	31.579	Neolamprologus_brichardi
ENSHBUG00000011715	-	95	31.481	ENSNBRG00000012595	-	85	31.481	Neolamprologus_brichardi
ENSHBUG00000011715	-	79	33.544	ENSORLG00000024236	-	83	33.544	Oryzias_latipes
ENSHBUG00000011715	-	81	31.546	ENSORLG00000024464	-	57	31.546	Oryzias_latipes
ENSHBUG00000011715	-	80	33.645	ENSORLG00000023713	-	81	33.645	Oryzias_latipes
ENSHBUG00000011715	-	74	36.486	ENSORLG00000028454	-	93	36.486	Oryzias_latipes
ENSHBUG00000011715	-	60	36.066	ENSORLG00020007002	-	95	36.066	Oryzias_latipes_hni
ENSHBUG00000011715	-	60	37.295	ENSORLG00020018629	-	64	37.295	Oryzias_latipes_hni
ENSHBUG00000011715	-	60	37.295	ENSORLG00020007779	-	65	37.295	Oryzias_latipes_hni
ENSHBUG00000011715	-	80	31.776	ENSORLG00020014626	-	59	31.776	Oryzias_latipes_hni
ENSHBUG00000011715	-	79	35.127	ENSORLG00020014149	-	97	35.127	Oryzias_latipes_hni
ENSHBUG00000011715	-	59	30.702	ENSORLG00020004063	-	69	30.702	Oryzias_latipes_hni
ENSHBUG00000011715	-	53	35.023	ENSORLG00020022004	-	73	35.023	Oryzias_latipes_hni
ENSHBUG00000011715	-	88	32.011	ENSORLG00015020895	-	93	32.011	Oryzias_latipes_hsok
ENSHBUG00000011715	-	70	31.618	ENSORLG00015008227	-	75	31.618	Oryzias_latipes_hsok
ENSHBUG00000011715	-	60	37.295	ENSORLG00015007703	-	62	37.295	Oryzias_latipes_hsok
ENSHBUG00000011715	-	73	34.237	ENSORLG00015022393	-	98	34.237	Oryzias_latipes_hsok
ENSHBUG00000011715	-	81	30.581	ENSORLG00015000419	-	92	30.581	Oryzias_latipes_hsok
ENSHBUG00000011715	-	53	37.500	ENSPKIG00000013511	-	73	37.500	Paramormyrops_kingsleyae
ENSHBUG00000011715	-	81	32.154	ENSPMGG00000014421	-	75	32.154	Periophthalmus_magnuspinnatus
ENSHBUG00000011715	-	92	55.989	ENSPLAG00000015080	-	86	55.989	Poecilia_latipinna
ENSHBUG00000011715	-	56	36.404	ENSPMEG00000004673	-	57	36.404	Poecilia_mexicana
ENSHBUG00000011715	-	91	55.462	ENSPREG00000004933	-	90	55.462	Poecilia_reticulata
ENSHBUG00000011715	-	83	36.391	ENSPREG00000010319	-	76	36.391	Poecilia_reticulata
ENSHBUG00000011715	-	52	31.696	ENSPREG00000006891	-	50	31.696	Poecilia_reticulata
ENSHBUG00000011715	-	79	30.255	ENSPREG00000006501	-	54	30.255	Poecilia_reticulata
ENSHBUG00000011715	-	63	35.156	ENSPNYG00000002466	-	84	35.156	Pundamilia_nyererei
ENSHBUG00000011715	-	80	30.189	ENSPNYG00000002652	-	81	30.189	Pundamilia_nyererei
ENSHBUG00000011715	-	77	30.844	ENSPNAG00000024749	-	71	30.844	Pygocentrus_nattereri
ENSHBUG00000011715	-	55	34.722	ENSPNAG00000010342	-	73	34.722	Pygocentrus_nattereri
ENSHBUG00000011715	-	74	32.886	ENSPNAG00000002786	-	72	32.886	Pygocentrus_nattereri
ENSHBUG00000011715	-	60	36.066	ENSPNAG00000014375	-	59	36.066	Pygocentrus_nattereri
ENSHBUG00000011715	-	75	30.556	ENSPNAG00000024211	-	63	30.556	Pygocentrus_nattereri
ENSHBUG00000011715	-	67	32.472	ENSSMAG00000014015	-	58	32.472	Scophthalmus_maximus
ENSHBUG00000011715	-	67	32.841	ENSSDUG00000021791	-	89	32.841	Seriola_dumerili
ENSHBUG00000011715	-	90	36.901	ENSSDUG00000015364	-	76	36.901	Seriola_dumerili
ENSHBUG00000011715	-	80	33.446	ENSSLDG00000006955	-	75	33.446	Seriola_lalandi_dorsalis
ENSHBUG00000011715	-	74	30.976	ENSSPUG00000015446	-	66	30.976	Sphenodon_punctatus
ENSHBUG00000011715	-	74	33.557	ENSSPAG00000000151	-	64	33.557	Stegastes_partitus
ENSHBUG00000011715	-	70	36.042	ENSXMAG00000026184	-	95	36.042	Xiphophorus_maculatus
ENSHBUG00000011715	-	90	54.839	ENSXMAG00000023211	-	78	54.839	Xiphophorus_maculatus