EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011864 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 959 bases
Position: chrJH425331.1:1264166-1265124
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000028219	SM-ATX	PF14438.6	2.2e-08	1	1
ENSHBUP00000028219	LSM14	PF12701.7	5.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000017165	-	402	-	ENSHBUP00000028219	133 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000011864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011864's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011864	-	75	64.000	ENSHBUG00000012323	-	95	64.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011864	-	67	64.045	ENSAPOG00000009997	-	82	64.045	Acanthochromis_polyacanthus
ENSHBUG00000011864	-	74	65.306	ENSACIG00000003134	-	80	65.306	Amphilophus_citrinellus
ENSHBUG00000011864	-	74	62.245	ENSAPEG00000013779	-	97	62.245	Amphiprion_percula
ENSHBUG00000011864	-	58	70.130	ENSATEG00000015882	-	88	70.130	Anabas_testudineus
ENSHBUG00000011864	-	71	90.526	ENSCVAG00000005570	-	98	90.526	Cyprinodon_variegatus
ENSHBUG00000011864	-	72	66.667	ENSCVAG00000012411	-	99	66.667	Cyprinodon_variegatus
ENSHBUG00000011864	-	72	65.625	ENSGAFG00000013718	-	99	65.625	Gambusia_affinis
ENSHBUG00000011864	-	71	89.362	ENSHCOG00000004862	-	86	89.362	Hippocampus_comes
ENSHBUG00000011864	-	67	62.921	ENSKMAG00000016674	-	96	54.167	Kryptolebias_marmoratus
ENSHBUG00000011864	-	71	65.263	ENSKMAG00000012850	-	98	65.263	Kryptolebias_marmoratus
ENSHBUG00000011864	-	68	71.429	ENSLBEG00000007971	-	88	71.429	Labrus_bergylta
ENSHBUG00000011864	-	83	76.423	ENSLBEG00000016427	lsm14b	86	76.423	Labrus_bergylta
ENSHBUG00000011864	-	74	75.510	ENSNGAG00000016305	-	76	77.895	Nannospalax_galili
ENSHBUG00000011864	-	100	99.248	ENSNBRG00000022606	-	100	99.248	Neolamprologus_brichardi
ENSHBUG00000011864	-	75	65.000	ENSNBRG00000022370	-	95	65.000	Neolamprologus_brichardi
ENSHBUG00000011864	-	72	64.948	ENSORLG00020018184	-	99	64.948	Oryzias_latipes_hni
ENSHBUG00000011864	-	59	65.823	ENSOMEG00000007241	-	95	65.823	Oryzias_melastigma
ENSHBUG00000011864	-	70	82.796	ENSPKIG00000003275	lsm14b	86	82.796	Paramormyrops_kingsleyae
ENSHBUG00000011864	-	57	59.211	ENSPMGG00000004595	-	77	59.211	Periophthalmus_magnuspinnatus
ENSHBUG00000011864	-	89	80.672	ENSPMGG00000014569	lsm14b	66	80.672	Periophthalmus_magnuspinnatus
ENSHBUG00000011864	-	71	89.474	ENSPREG00000016484	-	62	89.474	Poecilia_reticulata
ENSHBUG00000011864	-	62	65.854	ENSPREG00000007817	-	94	65.854	Poecilia_reticulata
ENSHBUG00000011864	-	75	64.000	ENSPNYG00000021706	-	94	64.000	Pundamilia_nyererei
ENSHBUG00000011864	-	100	100.000	ENSPNYG00000019601	-	100	100.000	Pundamilia_nyererei
ENSHBUG00000011864	-	60	70.000	ENSSLDG00000012686	-	87	70.000	Seriola_lalandi_dorsalis
ENSHBUG00000011864	-	65	93.182	ENSSLDG00000011706	-	96	93.182	Seriola_lalandi_dorsalis
ENSHBUG00000011864	-	60	70.000	ENSSLDG00000011341	-	87	70.000	Seriola_lalandi_dorsalis
ENSHBUG00000011864	-	67	66.292	ENSSPAG00000018837	-	88	66.292	Stegastes_partitus
ENSHBUG00000011864	-	64	62.353	ENSXCOG00000011423	-	93	62.353	Xiphophorus_couchianus
ENSHBUG00000011864	-	73	90.816	ENSXCOG00000017365	-	99	90.816	Xiphophorus_couchianus
ENSHBUG00000011864	-	64	62.353	ENSXMAG00000015481	-	93	62.353	Xiphophorus_maculatus