EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000011910 (Gene tree)
Gene ID: 102310523
Gene Symbol: sbno1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 12565 bases
Position: chrJH425809.1:142084-154648
Accession: 102310523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010321	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031653	-	3837	XM_014341339	ENSHBUP00000010321	1278 (aa)	XP_014196825	-

Gene Model

Click here to download ENSHBUG00000011910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000011910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000011910	sbno1	67	67.755	ENSHBUG00000010742	si:ch73-63e15.2	63	63.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000011910	sbno1	99	68.728	ENSG00000139697	SBNO1	99	68.616	Homo_sapiens
ENSHBUG00000011910	sbno1	85	84.917	ENSAPOG00000003196	sbno1	98	85.852	Acanthochromis_polyacanthus
ENSHBUG00000011910	sbno1	99	68.604	ENSAMEG00000015151	SBNO1	99	67.781	Ailuropoda_melanoleuca
ENSHBUG00000011910	sbno1	95	95.283	ENSACIG00000008088	sbno1	99	83.297	Amphilophus_citrinellus
ENSHBUG00000011910	sbno1	100	81.048	ENSAOCG00000014859	sbno1	99	81.838	Amphiprion_ocellaris
ENSHBUG00000011910	sbno1	100	80.976	ENSAPEG00000006069	sbno1	99	81.766	Amphiprion_percula
ENSHBUG00000011910	sbno1	100	80.880	ENSATEG00000006667	sbno1	100	81.286	Anabas_testudineus
ENSHBUG00000011910	sbno1	98	69.420	ENSAPLG00000015674	SBNO1	99	69.379	Anas_platyrhynchos
ENSHBUG00000011910	sbno1	98	70.266	ENSACAG00000015441	SBNO1	88	69.594	Anolis_carolinensis
ENSHBUG00000011910	sbno1	99	70.545	ENSANAG00000029958	-	99	70.381	Aotus_nancymaae
ENSHBUG00000011910	sbno1	100	92.668	ENSACLG00000024913	sbno1	100	92.668	Astatotilapia_calliptera
ENSHBUG00000011910	sbno1	95	79.245	ENSAMXG00000019473	sbno1	100	72.163	Astyanax_mexicanus
ENSHBUG00000011910	sbno1	100	70.298	ENSBTAG00000020505	SBNO1	99	70.408	Bos_taurus
ENSHBUG00000011910	sbno1	99	68.746	ENSCJAG00000016599	SBNO1	98	73.181	Callithrix_jacchus
ENSHBUG00000011910	sbno1	99	68.652	ENSCAFG00000007503	SBNO1	99	71.725	Canis_familiaris
ENSHBUG00000011910	sbno1	99	69.331	ENSCAFG00020015363	SBNO1	99	69.365	Canis_lupus_dingo
ENSHBUG00000011910	sbno1	100	68.746	ENSCHIG00000008382	SBNO1	99	68.777	Capra_hircus
ENSHBUG00000011910	sbno1	99	70.335	ENSTSYG00000012749	SBNO1	99	70.373	Carlito_syrichta
ENSHBUG00000011910	sbno1	97	71.407	ENSCAPG00000000384	SBNO1	98	71.157	Cavia_aperea
ENSHBUG00000011910	sbno1	99	69.094	ENSCPOG00000008109	SBNO1	99	68.741	Cavia_porcellus
ENSHBUG00000011910	sbno1	99	66.182	ENSCCAG00000035316	SBNO1	99	65.937	Cebus_capucinus
ENSHBUG00000011910	sbno1	97	71.202	ENSCATG00000008239	SBNO1	97	70.951	Cercocebus_atys
ENSHBUG00000011910	sbno1	99	68.902	ENSCLAG00000008995	SBNO1	99	68.429	Chinchilla_lanigera
ENSHBUG00000011910	sbno1	86	74.466	ENSCSAG00000002064	SBNO1	99	74.357	Chlorocebus_sabaeus
ENSHBUG00000011910	sbno1	92	72.529	ENSCHOG00000008814	SBNO1	90	72.588	Choloepus_hoffmanni
ENSHBUG00000011910	sbno1	98	70.961	ENSCPBG00000025968	SBNO1	98	70.044	Chrysemys_picta_bellii
ENSHBUG00000011910	sbno1	99	67.803	ENSCANG00000042688	-	99	67.394	Colobus_angolensis_palliatus
ENSHBUG00000011910	sbno1	100	68.227	ENSCGRG00001017470	Sbno1	99	68.114	Cricetulus_griseus_chok1gshd
ENSHBUG00000011910	sbno1	100	68.227	ENSCGRG00000004756	Sbno1	99	68.114	Cricetulus_griseus_crigri
ENSHBUG00000011910	sbno1	100	78.086	ENSCSEG00000011919	sbno1	100	79.418	Cynoglossus_semilaevis
ENSHBUG00000011910	sbno1	100	78.906	ENSCVAG00000007038	sbno1	100	78.551	Cyprinodon_variegatus
ENSHBUG00000011910	sbno1	100	72.552	ENSDARG00000099080	sbno1	100	73.118	Danio_rerio
ENSHBUG00000011910	sbno1	99	68.660	ENSDNOG00000017147	SBNO1	94	75.962	Dasypus_novemcinctus
ENSHBUG00000011910	sbno1	99	65.280	ENSDORG00000015261	Sbno1	99	64.507	Dipodomys_ordii
ENSHBUG00000011910	sbno1	86	74.874	ENSETEG00000005620	SBNO1	84	74.874	Echinops_telfairi
ENSHBUG00000011910	sbno1	76	63.938	ENSEBUG00000013823	sbno1	93	63.285	Eptatretus_burgeri
ENSHBUG00000011910	sbno1	51	75.775	ENSEASG00005012595	-	92	75.775	Equus_asinus_asinus
ENSHBUG00000011910	sbno1	97	70.987	ENSECAG00000006127	SBNO1	99	68.710	Equus_caballus
ENSHBUG00000011910	sbno1	84	77.163	ENSEEUG00000003793	SBNO1	75	77.146	Erinaceus_europaeus
ENSHBUG00000011910	sbno1	100	71.662	ENSELUG00000002886	sbno1	99	72.747	Esox_lucius
ENSHBUG00000011910	sbno1	99	68.821	ENSFCAG00000015331	SBNO1	99	68.567	Felis_catus
ENSHBUG00000011910	sbno1	98	69.203	ENSFALG00000009273	SBNO1	99	69.450	Ficedula_albicollis
ENSHBUG00000011910	sbno1	100	69.478	ENSFDAG00000014232	SBNO1	99	69.281	Fukomys_damarensis
ENSHBUG00000011910	sbno1	100	78.768	ENSFHEG00000007360	sbno1	100	78.416	Fundulus_heteroclitus
ENSHBUG00000011910	sbno1	96	77.481	ENSGMOG00000018229	sbno1	99	77.863	Gadus_morhua
ENSHBUG00000011910	sbno1	87	68.302	ENSGALG00000003392	SBNO1	99	68.740	Gallus_gallus
ENSHBUG00000011910	sbno1	100	81.370	ENSGAFG00000003960	sbno1	99	81.268	Gambusia_affinis
ENSHBUG00000011910	sbno1	96	80.350	ENSGACG00000015633	sbno1	99	80.460	Gasterosteus_aculeatus
ENSHBUG00000011910	sbno1	98	70.404	ENSGAGG00000001065	SBNO1	99	69.639	Gopherus_agassizii
ENSHBUG00000011910	sbno1	99	70.408	ENSGGOG00000015000	SBNO1	99	70.227	Gorilla_gorilla
ENSHBUG00000011910	sbno1	99	68.879	ENSHGLG00000014165	-	99	68.192	Heterocephalus_glaber_female
ENSHBUG00000011910	sbno1	96	76.389	ENSHCOG00000003246	sbno1	95	77.735	Hippocampus_comes
ENSHBUG00000011910	sbno1	100	72.305	ENSIPUG00000015830	Sbno1	98	72.591	Ictalurus_punctatus
ENSHBUG00000011910	sbno1	99	70.481	ENSSTOG00000023221	SBNO1	99	70.373	Ictidomys_tridecemlineatus
ENSHBUG00000011910	sbno1	99	68.902	ENSJJAG00000001741	Sbno1	99	68.926	Jaculus_jaculus
ENSHBUG00000011910	sbno1	99	82.950	ENSKMAG00000009696	sbno1	99	82.925	Kryptolebias_marmoratus
ENSHBUG00000011910	sbno1	100	79.211	ENSLBEG00000007623	sbno1	99	80.086	Labrus_bergylta
ENSHBUG00000011910	sbno1	100	65.149	ENSLACG00000017227	SBNO1	99	66.962	Latimeria_chalumnae
ENSHBUG00000011910	sbno1	100	72.520	ENSLOCG00000005725	sbno1	97	72.480	Lepisosteus_oculatus
ENSHBUG00000011910	sbno1	99	68.372	ENSLAFG00000002135	SBNO1	99	68.451	Loxodonta_africana
ENSHBUG00000011910	sbno1	99	69.376	ENSMFAG00000031429	SBNO1	99	69.119	Macaca_fascicularis
ENSHBUG00000011910	sbno1	99	69.376	ENSMMUG00000011496	SBNO1	99	69.119	Macaca_mulatta
ENSHBUG00000011910	sbno1	99	71.155	ENSMLEG00000033260	SBNO1	99	70.975	Mandrillus_leucophaeus
ENSHBUG00000011910	sbno1	100	80.455	ENSMAMG00000005473	sbno1	100	80.242	Mastacembelus_armatus
ENSHBUG00000011910	sbno1	98	69.448	ENSMGAG00000003274	SBNO1	99	69.621	Meleagris_gallopavo
ENSHBUG00000011910	sbno1	50	76.097	ENSMAUG00000004834	-	99	76.248	Mesocricetus_auratus
ENSHBUG00000011910	sbno1	99	68.950	ENSMICG00000006573	-	98	73.360	Microcebus_murinus
ENSHBUG00000011910	sbno1	100	67.452	ENSMOCG00000009390	Sbno1	99	67.751	Microtus_ochrogaster
ENSHBUG00000011910	sbno1	100	77.753	ENSMMOG00000008691	sbno1	99	78.682	Mola_mola
ENSHBUG00000011910	sbno1	99	68.563	ENSMODG00000012470	SBNO1	98	68.477	Monodelphis_domestica
ENSHBUG00000011910	sbno1	100	80.590	ENSMALG00000001056	sbno1	100	80.959	Monopterus_albus
ENSHBUG00000011910	sbno1	99	69.121	MGP_CAROLIEiJ_G0027749	Sbno1	95	89.912	Mus_caroli
ENSHBUG00000011910	sbno1	99	69.214	ENSMUSG00000038095	Sbno1	94	89.912	Mus_musculus
ENSHBUG00000011910	sbno1	99	69.313	MGP_PahariEiJ_G0024329	Sbno1	95	89.912	Mus_pahari
ENSHBUG00000011910	sbno1	99	69.121	MGP_SPRETEiJ_G0028747	Sbno1	95	89.912	Mus_spretus
ENSHBUG00000011910	sbno1	99	68.821	ENSMPUG00000001658	SBNO1	99	68.567	Mustela_putorius_furo
ENSHBUG00000011910	sbno1	99	68.951	ENSMLUG00000017159	SBNO1	99	68.594	Myotis_lucifugus
ENSHBUG00000011910	sbno1	99	68.679	ENSNGAG00000012620	Sbno1	98	67.431	Nannospalax_galili
ENSHBUG00000011910	sbno1	100	88.427	ENSNBRG00000019189	sbno1	100	88.467	Neolamprologus_brichardi
ENSHBUG00000011910	sbno1	99	68.510	ENSNLEG00000001502	SBNO1	99	68.172	Nomascus_leucogenys
ENSHBUG00000011910	sbno1	62	69.811	ENSMEUG00000008768	-	91	75.362	Notamacropus_eugenii
ENSHBUG00000011910	sbno1	99	68.884	ENSOPRG00000011054	SBNO1	99	69.027	Ochotona_princeps
ENSHBUG00000011910	sbno1	99	69.308	ENSODEG00000009997	SBNO1	99	68.973	Octodon_degus
ENSHBUG00000011910	sbno1	100	85.633	ENSONIG00000015348	sbno1	100	85.633	Oreochromis_niloticus
ENSHBUG00000011910	sbno1	100	66.974	ENSOCUG00000002441	SBNO1	96	66.785	Oryctolagus_cuniculus
ENSHBUG00000011910	sbno1	100	77.612	ENSORLG00000001593	sbno1	100	77.399	Oryzias_latipes
ENSHBUG00000011910	sbno1	100	77.738	ENSORLG00020015216	sbno1	100	77.596	Oryzias_latipes_hni
ENSHBUG00000011910	sbno1	100	77.809	ENSORLG00015002726	sbno1	100	77.667	Oryzias_latipes_hsok
ENSHBUG00000011910	sbno1	99	79.041	ENSOMEG00000019313	sbno1	99	78.597	Oryzias_melastigma
ENSHBUG00000011910	sbno1	50	76.657	ENSOGAG00000010781	-	99	76.657	Otolemur_garnettii
ENSHBUG00000011910	sbno1	100	68.577	ENSOARG00000004404	SBNO1	99	68.608	Ovis_aries
ENSHBUG00000011910	sbno1	99	70.481	ENSPPAG00000024635	SBNO1	99	70.300	Pan_paniscus
ENSHBUG00000011910	sbno1	99	68.821	ENSPPRG00000022092	SBNO1	99	68.567	Panthera_pardus
ENSHBUG00000011910	sbno1	99	68.897	ENSPTIG00000017803	SBNO1	99	68.714	Panthera_tigris_altaica
ENSHBUG00000011910	sbno1	99	70.481	ENSPTRG00000005597	SBNO1	99	70.300	Pan_troglodytes
ENSHBUG00000011910	sbno1	99	70.627	ENSPANG00000011640	SBNO1	99	70.300	Papio_anubis
ENSHBUG00000011910	sbno1	100	71.868	ENSPKIG00000001441	sbno1	100	71.674	Paramormyrops_kingsleyae
ENSHBUG00000011910	sbno1	98	70.886	ENSPSIG00000009572	-	99	69.897	Pelodiscus_sinensis
ENSHBUG00000011910	sbno1	91	65.358	ENSPSIG00000009256	-	99	64.706	Pelodiscus_sinensis
ENSHBUG00000011910	sbno1	100	68.298	ENSPEMG00000016087	Sbno1	99	68.185	Peromyscus_maniculatus_bairdii
ENSHBUG00000011910	sbno1	99	70.519	ENSPCIG00000010985	SBNO1	99	70.154	Phascolarctos_cinereus
ENSHBUG00000011910	sbno1	100	79.318	ENSPFOG00000005069	sbno1	100	79.247	Poecilia_formosa
ENSHBUG00000011910	sbno1	100	79.318	ENSPLAG00000015015	sbno1	100	79.247	Poecilia_latipinna
ENSHBUG00000011910	sbno1	100	79.261	ENSPMEG00000021212	sbno1	100	79.190	Poecilia_mexicana
ENSHBUG00000011910	sbno1	100	79.449	ENSPREG00000017746	sbno1	99	80.164	Poecilia_reticulata
ENSHBUG00000011910	sbno1	99	68.951	ENSPPYG00000005084	SBNO1	99	68.522	Pongo_abelii
ENSHBUG00000011910	sbno1	84	75.714	ENSPCAG00000008634	SBNO1	81	75.714	Procavia_capensis
ENSHBUG00000011910	sbno1	99	70.168	ENSPCOG00000024277	SBNO1	99	69.985	Propithecus_coquereli
ENSHBUG00000011910	sbno1	87	68.379	ENSPVAG00000015304	SBNO1	87	68.725	Pteropus_vampyrus
ENSHBUG00000011910	sbno1	100	89.670	ENSPNYG00000004291	sbno1	100	89.670	Pundamilia_nyererei
ENSHBUG00000011910	sbno1	100	72.139	ENSPNAG00000015622	sbno1	100	72.559	Pygocentrus_nattereri
ENSHBUG00000011910	sbno1	99	68.777	ENSRNOG00000001064	Sbno1	99	68.594	Rattus_norvegicus
ENSHBUG00000011910	sbno1	99	70.554	ENSRROG00000034230	SBNO1	99	70.373	Rhinopithecus_roxellana
ENSHBUG00000011910	sbno1	97	71.384	ENSSBOG00000015422	SBNO1	97	71.272	Saimiri_boliviensis_boliviensis
ENSHBUG00000011910	sbno1	100	73.843	ENSSFOG00015019025	sbno1	100	73.642	Scleropages_formosus
ENSHBUG00000011910	sbno1	100	82.516	ENSSMAG00000013640	sbno1	100	82.443	Scophthalmus_maximus
ENSHBUG00000011910	sbno1	100	80.702	ENSSDUG00000023480	sbno1	100	81.135	Seriola_dumerili
ENSHBUG00000011910	sbno1	100	80.355	ENSSLDG00000007928	sbno1	100	80.922	Seriola_lalandi_dorsalis
ENSHBUG00000011910	sbno1	86	71.040	ENSSARG00000002594	SBNO1	87	70.880	Sorex_araneus
ENSHBUG00000011910	sbno1	98	70.759	ENSSPUG00000012640	SBNO1	99	70.403	Sphenodon_punctatus
ENSHBUG00000011910	sbno1	100	80.426	ENSSPAG00000016244	sbno1	100	81.064	Stegastes_partitus
ENSHBUG00000011910	sbno1	99	70.357	ENSSSCG00000009776	SBNO1	99	70.395	Sus_scrofa
ENSHBUG00000011910	sbno1	98	69.058	ENSTGUG00000005380	SBNO1	99	69.308	Taeniopygia_guttata
ENSHBUG00000011910	sbno1	99	78.873	ENSTRUG00000018490	sbno1	99	78.799	Takifugu_rubripes
ENSHBUG00000011910	sbno1	57	76.471	ENSTNIG00000013506	sbno1	99	78.086	Tetraodon_nigroviridis
ENSHBUG00000011910	sbno1	99	68.821	ENSUAMG00000019671	SBNO1	99	67.997	Ursus_americanus
ENSHBUG00000011910	sbno1	99	68.821	ENSUMAG00000004002	SBNO1	99	67.997	Ursus_maritimus
ENSHBUG00000011910	sbno1	90	76.190	ENSVPAG00000007024	SBNO1	95	76.190	Vicugna_pacos
ENSHBUG00000011910	sbno1	99	68.750	ENSVVUG00000027807	SBNO1	99	68.496	Vulpes_vulpes
ENSHBUG00000011910	sbno1	89	75.000	ENSXETG00000031930	SBNO1	83	74.229	Xenopus_tropicalis
ENSHBUG00000011910	sbno1	86	76.735	ENSXCOG00000011607	sbno1	99	79.450	Xiphophorus_couchianus
ENSHBUG00000011910	sbno1	100	81.919	ENSXMAG00000002140	sbno1	99	82.262	Xiphophorus_maculatus