EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012058 (Gene tree)
Gene ID: 102296067
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 27358 bases
Position: chrJH425398.1:789860-817217
Accession: 102296067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010478	RRM_1	PF00076.22	3.7e-16	1	1
ENSHBUP00000028322	RRM_1	PF00076.22	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000017364	-	717	-	ENSHBUP00000010478	238 (aa)	-	-
ENSHBUT00000031717	-	3550	XM_005926172	ENSHBUP00000028322	250 (aa)	XP_005926234	UPI00032A34E4

Gene Model

Click here to download ENSHBUG00000012058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012058	rbm38	83	30.208	ENSHBUG00000021921	MSI1	85	30.526
ENSHBUG00000012058	rbm38	65	67.925	ENSHBUG00000017155	rbm24b	100	57.563
ENSHBUG00000012058	rbm38	83	30.208	ENSHBUG00000011841	-	86	30.208
ENSHBUG00000012058	rbm38	98	64.143	ENSHBUG00000011778	-	100	64.143
ENSHBUG00000012058	rbm38	81	57.767	ENSHBUG00000003071	rbm24a	100	58.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012058	rbm38	97	59.091	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSHBUG00000012058	rbm38	98	64.286	ENSAPOG00000009939	-	100	64.706	Acanthochromis_polyacanthus
ENSHBUG00000012058	rbm38	100	94.400	ENSAPOG00000003301	rbm38	100	94.400	Acanthochromis_polyacanthus
ENSHBUG00000012058	rbm38	100	95.600	ENSACIG00000000010	rbm38	100	95.600	Amphilophus_citrinellus
ENSHBUG00000012058	rbm38	98	63.241	ENSACIG00000012502	-	100	83.761	Amphilophus_citrinellus
ENSHBUG00000012058	rbm38	100	94.400	ENSAOCG00000013497	-	100	94.400	Amphiprion_ocellaris
ENSHBUG00000012058	rbm38	95	64.583	ENSAOCG00000012559	RBM38	98	65.021	Amphiprion_ocellaris
ENSHBUG00000012058	rbm38	98	63.492	ENSAPEG00000023581	-	100	63.922	Amphiprion_percula
ENSHBUG00000012058	rbm38	100	94.400	ENSAPEG00000013137	rbm38	100	94.400	Amphiprion_percula
ENSHBUG00000012058	rbm38	100	88.800	ENSATEG00000016366	rbm38	100	88.800	Anabas_testudineus
ENSHBUG00000012058	rbm38	98	64.683	ENSATEG00000016710	-	100	65.098	Anabas_testudineus
ENSHBUG00000012058	rbm38	92	58.296	ENSACAG00000016238	RBM38	93	57.391	Anolis_carolinensis
ENSHBUG00000012058	rbm38	92	61.333	ENSANAG00000031959	RBM38	81	84.848	Aotus_nancymaae
ENSHBUG00000012058	rbm38	98	64.143	ENSACLG00000019514	-	100	64.143	Astatotilapia_calliptera
ENSHBUG00000012058	rbm38	95	55.882	ENSAMXG00000038120	rbm38	96	55.882	Astyanax_mexicanus
ENSHBUG00000012058	rbm38	98	61.200	ENSAMXG00000015601	-	100	61.200	Astyanax_mexicanus
ENSHBUG00000012058	rbm38	89	61.818	ENSBTAG00000008105	RBM38	89	61.818	Bos_taurus
ENSHBUG00000012058	rbm38	61	59.310	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSHBUG00000012058	rbm38	98	58.506	ENSCJAG00000019139	RBM38	81	84.848	Callithrix_jacchus
ENSHBUG00000012058	rbm38	98	58.577	ENSCAFG00020021943	RBM38	96	58.577	Canis_lupus_dingo
ENSHBUG00000012058	rbm38	89	60.092	ENSCHIG00000002609	RBM38	89	60.092	Capra_hircus
ENSHBUG00000012058	rbm38	98	60.251	ENSCPOG00000012781	RBM38	96	60.251	Cavia_porcellus
ENSHBUG00000012058	rbm38	98	58.506	ENSCCAG00000036872	RBM38	81	84.848	Cebus_capucinus
ENSHBUG00000012058	rbm38	98	59.336	ENSCATG00000032133	RBM38	81	84.848	Cercocebus_atys
ENSHBUG00000012058	rbm38	98	59.833	ENSCLAG00000005906	RBM38	99	59.833	Chinchilla_lanigera
ENSHBUG00000012058	rbm38	98	59.336	ENSCSAG00000015503	RBM38	96	59.336	Chlorocebus_sabaeus
ENSHBUG00000012058	rbm38	93	59.244	ENSCPBG00000024059	RBM38	100	59.821	Chrysemys_picta_bellii
ENSHBUG00000012058	rbm38	63	61.783	ENSCING00000025102	-	66	61.783	Ciona_intestinalis
ENSHBUG00000012058	rbm38	64	58.861	ENSCSAVG00000001132	-	73	51.220	Ciona_savignyi
ENSHBUG00000012058	rbm38	97	45.607	ENSCANG00000030105	-	86	45.607	Colobus_angolensis_palliatus
ENSHBUG00000012058	rbm38	81	62.626	ENSCGRG00001012928	Rbm38	100	57.959	Cricetulus_griseus_chok1gshd
ENSHBUG00000012058	rbm38	98	64.940	ENSCSEG00000004701	-	100	64.286	Cynoglossus_semilaevis
ENSHBUG00000012058	rbm38	84	67.464	ENSCSEG00000020943	rbm38	68	67.464	Cynoglossus_semilaevis
ENSHBUG00000012058	rbm38	100	84.000	ENSCVAG00000015952	rbm38	100	84.000	Cyprinodon_variegatus
ENSHBUG00000012058	rbm38	98	63.492	ENSCVAG00000005472	-	100	63.922	Cyprinodon_variegatus
ENSHBUG00000012058	rbm38	98	63.563	ENSDARG00000058818	rbm38	100	63.563	Danio_rerio
ENSHBUG00000012058	rbm38	92	59.276	ENSDNOG00000032004	RBM38	100	59.276	Dasypus_novemcinctus
ENSHBUG00000012058	rbm38	98	58.921	ENSECAG00000007700	RBM38	96	58.921	Equus_caballus
ENSHBUG00000012058	rbm38	97	58.298	ENSEEUG00000013489	RBM38	93	58.228	Erinaceus_europaeus
ENSHBUG00000012058	rbm38	92	72.609	ENSELUG00000000585	-	100	72.609	Esox_lucius
ENSHBUG00000012058	rbm38	98	63.922	ENSELUG00000005849	-	100	63.922	Esox_lucius
ENSHBUG00000012058	rbm38	98	58.159	ENSFCAG00000042916	RBM38	92	76.522	Felis_catus
ENSHBUG00000012058	rbm38	73	68.182	ENSFALG00000010805	RBM38	94	64.550	Ficedula_albicollis
ENSHBUG00000012058	rbm38	98	61.328	ENSFHEG00000006160	-	100	61.328	Fundulus_heteroclitus
ENSHBUG00000012058	rbm38	100	85.259	ENSFHEG00000017748	rbm38	100	85.259	Fundulus_heteroclitus
ENSHBUG00000012058	rbm38	73	71.023	ENSGMOG00000016655	-	99	70.526	Gadus_morhua
ENSHBUG00000012058	rbm38	92	59.641	ENSGALG00000026081	RBM38	100	59.641	Gallus_gallus
ENSHBUG00000012058	rbm38	91	64.574	ENSGACG00000009873	-	100	64.574	Gasterosteus_aculeatus
ENSHBUG00000012058	rbm38	92	82.110	ENSGACG00000015224	rbm38	100	82.110	Gasterosteus_aculeatus
ENSHBUG00000012058	rbm38	93	60.084	ENSGAGG00000001187	RBM38	100	60.714	Gopherus_agassizii
ENSHBUG00000012058	rbm38	92	61.883	ENSHGLG00000015077	RBM38	90	61.883	Heterocephalus_glaber_female
ENSHBUG00000012058	rbm38	100	62.151	ENSHCOG00000019040	rbm38	100	62.151	Hippocampus_comes
ENSHBUG00000012058	rbm38	84	66.509	ENSHCOG00000005622	-	59	67.453	Hippocampus_comes
ENSHBUG00000012058	rbm38	98	60.400	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSHBUG00000012058	rbm38	91	74.468	ENSKMAG00000012402	rbm38	99	74.468	Kryptolebias_marmoratus
ENSHBUG00000012058	rbm38	100	88.800	ENSLBEG00000018878	rbm38	100	88.800	Labrus_bergylta
ENSHBUG00000012058	rbm38	98	62.151	ENSLBEG00000016163	RBM38	100	63.137	Labrus_bergylta
ENSHBUG00000012058	rbm38	98	65.323	ENSLOCG00000003456	rbm38	100	65.323	Lepisosteus_oculatus
ENSHBUG00000012058	rbm38	98	59.336	ENSMFAG00000043808	RBM38	81	84.848	Macaca_fascicularis
ENSHBUG00000012058	rbm38	98	59.336	ENSMMUG00000031391	RBM38	81	84.848	Macaca_mulatta
ENSHBUG00000012058	rbm38	98	59.336	ENSMNEG00000034683	RBM38	81	84.848	Macaca_nemestrina
ENSHBUG00000012058	rbm38	98	66.135	ENSMAMG00000020499	RBM38	100	66.535	Mastacembelus_armatus
ENSHBUG00000012058	rbm38	100	91.200	ENSMAMG00000024135	rbm38	100	91.200	Mastacembelus_armatus
ENSHBUG00000012058	rbm38	100	100.000	ENSMZEG00005026036	rbm38	100	100.000	Maylandia_zebra
ENSHBUG00000012058	rbm38	98	64.143	ENSMZEG00005000849	-	100	64.143	Maylandia_zebra
ENSHBUG00000012058	rbm38	100	57.551	ENSMAUG00000021211	Rbm38	100	58.776	Mesocricetus_auratus
ENSHBUG00000012058	rbm38	92	59.565	ENSMICG00000038011	RBM38	100	59.565	Microcebus_murinus
ENSHBUG00000012058	rbm38	100	57.551	ENSMOCG00000008715	Rbm38	100	58.776	Microtus_ochrogaster
ENSHBUG00000012058	rbm38	98	63.492	ENSMMOG00000020051	-	100	63.922	Mola_mola
ENSHBUG00000012058	rbm38	96	57.627	ENSMODG00000016458	RBM38	97	58.475	Monodelphis_domestica
ENSHBUG00000012058	rbm38	100	74.000	ENSMALG00000022327	rbm38	100	74.800	Monopterus_albus
ENSHBUG00000012058	rbm38	76	73.626	ENSMALG00000004680	RBM38	89	64.017	Monopterus_albus
ENSHBUG00000012058	rbm38	100	58.367	MGP_CAROLIEiJ_G0024745	Rbm38	100	58.367	Mus_caroli
ENSHBUG00000012058	rbm38	100	58.367	ENSMUSG00000027510	Rbm38	100	58.367	Mus_musculus
ENSHBUG00000012058	rbm38	100	58.367	MGP_PahariEiJ_G0026186	Rbm38	100	58.367	Mus_pahari
ENSHBUG00000012058	rbm38	100	58.367	MGP_SPRETEiJ_G0025665	Rbm38	100	58.367	Mus_spretus
ENSHBUG00000012058	rbm38	73	67.045	ENSMPUG00000006518	RBM38	91	64.362	Mustela_putorius_furo
ENSHBUG00000012058	rbm38	92	60.538	ENSMLUG00000011140	RBM38	100	60.538	Myotis_lucifugus
ENSHBUG00000012058	rbm38	100	99.200	ENSNBRG00000022685	rbm38	100	99.200	Neolamprologus_brichardi
ENSHBUG00000012058	rbm38	98	64.143	ENSNBRG00000022545	-	100	64.143	Neolamprologus_brichardi
ENSHBUG00000012058	rbm38	54	67.188	ENSMEUG00000005475	-	95	67.188	Notamacropus_eugenii
ENSHBUG00000012058	rbm38	98	60.251	ENSODEG00000007980	RBM38	96	60.251	Octodon_degus
ENSHBUG00000012058	rbm38	98	64.000	ENSONIG00000020324	-	100	64.000	Oreochromis_niloticus
ENSHBUG00000012058	rbm38	98	99.592	ENSONIG00000017073	rbm38	100	99.592	Oreochromis_niloticus
ENSHBUG00000012058	rbm38	93	58.150	ENSOANG00000009259	RBM38	85	58.150	Ornithorhynchus_anatinus
ENSHBUG00000012058	rbm38	100	82.072	ENSORLG00000012154	rbm38	100	82.072	Oryzias_latipes
ENSHBUG00000012058	rbm38	98	61.811	ENSORLG00000027180	-	100	62.646	Oryzias_latipes
ENSHBUG00000012058	rbm38	100	61.240	ENSORLG00020020751	-	100	62.646	Oryzias_latipes_hni
ENSHBUG00000012058	rbm38	100	82.072	ENSORLG00020017871	rbm38	100	82.072	Oryzias_latipes_hni
ENSHBUG00000012058	rbm38	100	82.072	ENSORLG00015012606	rbm38	100	82.072	Oryzias_latipes_hsok
ENSHBUG00000012058	rbm38	98	62.055	ENSORLG00015017040	-	100	63.241	Oryzias_latipes_hsok
ENSHBUG00000012058	rbm38	100	81.275	ENSOMEG00000006805	rbm38	100	81.275	Oryzias_melastigma
ENSHBUG00000012058	rbm38	98	63.095	ENSOMEG00000023912	-	100	63.889	Oryzias_melastigma
ENSHBUG00000012058	rbm38	97	59.091	ENSOGAG00000029136	RBM38	97	59.091	Otolemur_garnettii
ENSHBUG00000012058	rbm38	98	58.159	ENSPPRG00000009507	RBM38	92	76.522	Panthera_pardus
ENSHBUG00000012058	rbm38	61	71.724	ENSPTRG00000045845	-	77	71.724	Pan_troglodytes
ENSHBUG00000012058	rbm38	81	63.636	ENSPTRG00000013661	RBM38	94	77.586	Pan_troglodytes
ENSHBUG00000012058	rbm38	98	59.336	ENSPANG00000020919	-	81	84.848	Papio_anubis
ENSHBUG00000012058	rbm38	97	47.059	ENSPANG00000033127	-	97	46.444	Papio_anubis
ENSHBUG00000012058	rbm38	98	58.800	ENSPKIG00000018122	-	100	80.342	Paramormyrops_kingsleyae
ENSHBUG00000012058	rbm38	98	60.714	ENSPKIG00000025417	rbm38	100	63.281	Paramormyrops_kingsleyae
ENSHBUG00000012058	rbm38	99	57.143	ENSPSIG00000011649	RBM38	100	57.143	Pelodiscus_sinensis
ENSHBUG00000012058	rbm38	100	78.088	ENSPMGG00000011343	rbm38	100	80.478	Periophthalmus_magnuspinnatus
ENSHBUG00000012058	rbm38	98	60.236	ENSPMGG00000017094	-	100	60.630	Periophthalmus_magnuspinnatus
ENSHBUG00000012058	rbm38	93	59.912	ENSPCIG00000013648	RBM38	94	59.912	Phascolarctos_cinereus
ENSHBUG00000012058	rbm38	100	85.827	ENSPFOG00000011658	rbm38	100	85.827	Poecilia_formosa
ENSHBUG00000012058	rbm38	100	85.433	ENSPLAG00000005218	rbm38	100	85.433	Poecilia_latipinna
ENSHBUG00000012058	rbm38	98	62.891	ENSPLAG00000002500	-	100	64.143	Poecilia_latipinna
ENSHBUG00000012058	rbm38	100	86.220	ENSPMEG00000015770	rbm38	100	86.220	Poecilia_mexicana
ENSHBUG00000012058	rbm38	100	85.433	ENSPREG00000007398	rbm38	100	85.433	Poecilia_reticulata
ENSHBUG00000012058	rbm38	97	57.895	ENSPCOG00000026201	RBM38	94	76.724	Propithecus_coquereli
ENSHBUG00000012058	rbm38	82	39.303	ENSPVAG00000006457	RBM38	96	39.834	Pteropus_vampyrus
ENSHBUG00000012058	rbm38	100	99.600	ENSPNYG00000021373	rbm38	100	99.600	Pundamilia_nyererei
ENSHBUG00000012058	rbm38	98	64.143	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSHBUG00000012058	rbm38	95	60.669	ENSPNAG00000010596	rbm38	96	60.669	Pygocentrus_nattereri
ENSHBUG00000012058	rbm38	98	62.000	ENSPNAG00000015123	-	91	81.356	Pygocentrus_nattereri
ENSHBUG00000012058	rbm38	100	58.776	ENSRNOG00000006420	Rbm38	100	58.776	Rattus_norvegicus
ENSHBUG00000012058	rbm38	97	51.883	ENSRROG00000036388	-	97	51.883	Rhinopithecus_roxellana
ENSHBUG00000012058	rbm38	92	60.444	ENSSBOG00000031053	RBM38	92	84.848	Saimiri_boliviensis_boliviensis
ENSHBUG00000012058	rbm38	98	56.800	ENSSFOG00015004453	rbm38	100	60.800	Scleropages_formosus
ENSHBUG00000012058	rbm38	100	93.600	ENSSDUG00000022611	rbm38	100	93.600	Seriola_dumerili
ENSHBUG00000012058	rbm38	98	64.683	ENSSDUG00000021082	RBM38	100	65.490	Seriola_dumerili
ENSHBUG00000012058	rbm38	100	93.600	ENSSLDG00000010845	rbm38	100	93.600	Seriola_lalandi_dorsalis
ENSHBUG00000012058	rbm38	98	64.683	ENSSLDG00000011778	RBM38	100	65.490	Seriola_lalandi_dorsalis
ENSHBUG00000012058	rbm38	100	94.800	ENSSPAG00000011113	rbm38	100	94.800	Stegastes_partitus
ENSHBUG00000012058	rbm38	98	64.683	ENSSPAG00000020989	RBM38	100	64.706	Stegastes_partitus
ENSHBUG00000012058	rbm38	98	58.996	ENSSSCG00000007504	RBM38	96	58.996	Sus_scrofa
ENSHBUG00000012058	rbm38	98	62.302	ENSTRUG00000019869	-	100	61.905	Takifugu_rubripes
ENSHBUG00000012058	rbm38	100	83.200	ENSTRUG00000024954	rbm38	100	84.000	Takifugu_rubripes
ENSHBUG00000012058	rbm38	92	65.639	ENSTNIG00000007093	-	100	65.639	Tetraodon_nigroviridis
ENSHBUG00000012058	rbm38	98	58.577	ENSUAMG00000019780	RBM38	96	58.577	Ursus_americanus
ENSHBUG00000012058	rbm38	98	58.577	ENSVVUG00000017246	RBM38	96	58.577	Vulpes_vulpes
ENSHBUG00000012058	rbm38	92	57.919	ENSXETG00000011268	rbm38	99	59.292	Xenopus_tropicalis
ENSHBUG00000012058	rbm38	52	76.923	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSHBUG00000012058	rbm38	100	87.600	ENSXMAG00000023662	rbm38	100	87.600	Xiphophorus_maculatus