EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012290 (Gene tree)
Gene ID: 102299326
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 9949 bases
Position: chrJH425338.1:3133046-3142994
Accession: 102299326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010709	SAP	PF02037.27	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031814	-	5039	XM_005917131	ENSHBUP00000010709	798 (aa)	XP_005917193	UPI0003BDB4EC

Gene Model

Click here to download ENSHBUG00000012290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012290	hnrnpub	66	46.494	ENSHBUG00000010129	HNRNPUL1	78	55.556
ENSHBUG00000012290	hnrnpub	76	33.654	ENSHBUG00000013076	si:ch211-107m4.1	68	37.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012290	hnrnpub	85	83.333	ENSG00000153187	HNRNPU	99	64.667	Homo_sapiens
ENSHBUG00000012290	hnrnpub	100	86.369	ENSAPOG00000017400	hnrnpub	100	85.856	Acanthochromis_polyacanthus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSAMEG00000009145	HNRNPU	76	83.333	Ailuropoda_melanoleuca
ENSHBUG00000012290	hnrnpub	100	84.606	ENSACIG00000012138	hnrnpub	96	91.354	Amphilophus_citrinellus
ENSHBUG00000012290	hnrnpub	100	88.104	ENSAOCG00000015843	hnrnpub	100	86.973	Amphiprion_ocellaris
ENSHBUG00000012290	hnrnpub	100	88.104	ENSAPEG00000014679	hnrnpub	100	86.973	Amphiprion_percula
ENSHBUG00000012290	hnrnpub	98	87.594	ENSATEG00000016178	hnrnpub	97	86.181	Anabas_testudineus
ENSHBUG00000012290	hnrnpub	86	73.810	ENSACAG00000004511	HNRNPU	77	73.810	Anolis_carolinensis
ENSHBUG00000012290	hnrnpub	80	57.098	ENSANAG00000033895	-	80	83.333	Aotus_nancymaae
ENSHBUG00000012290	hnrnpub	100	99.499	ENSACLG00000008165	hnrnpub	100	99.499	Astatotilapia_calliptera
ENSHBUG00000012290	hnrnpub	85	83.333	ENSBTAG00000007606	HNRNPU	78	83.333	Bos_taurus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSCJAG00000016914	HNRNPU	78	83.333	Callithrix_jacchus
ENSHBUG00000012290	hnrnpub	80	57.590	ENSCAFG00020000918	HNRNPU	75	57.380	Canis_lupus_dingo
ENSHBUG00000012290	hnrnpub	85	83.333	ENSCHIG00000004900	HNRNPU	80	83.333	Capra_hircus
ENSHBUG00000012290	hnrnpub	85	85.714	ENSCPOG00000011887	HNRNPU	78	85.714	Cavia_porcellus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSCCAG00000037859	-	78	83.333	Cebus_capucinus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSCATG00000035273	HNRNPU	78	83.333	Cercocebus_atys
ENSHBUG00000012290	hnrnpub	85	85.714	ENSCLAG00000007100	HNRNPU	78	85.714	Chinchilla_lanigera
ENSHBUG00000012290	hnrnpub	80	57.098	ENSCSAG00000009219	HNRNPU	75	57.229	Chlorocebus_sabaeus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSCHOG00000001387	HNRNPU	76	83.333	Choloepus_hoffmanni
ENSHBUG00000012290	hnrnpub	96	56.753	ENSCPBG00000009415	HNRNPU	79	66.102	Chrysemys_picta_bellii
ENSHBUG00000012290	hnrnpub	85	83.333	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSHBUG00000012290	hnrnpub	86	78.723	ENSCGRG00001020525	Hnrnpu	77	78.723	Cricetulus_griseus_chok1gshd
ENSHBUG00000012290	hnrnpub	100	77.365	ENSCSEG00000010804	hnrnpub	100	79.042	Cynoglossus_semilaevis
ENSHBUG00000012290	hnrnpub	90	81.481	ENSCVAG00000004280	hnrnpub	100	70.954	Cyprinodon_variegatus
ENSHBUG00000012290	hnrnpub	100	60.990	ENSDARG00000004735	hnrnpub	83	63.930	Danio_rerio
ENSHBUG00000012290	hnrnpub	100	61.222	ENSDARG00000015206	hnrnpua	100	59.305	Danio_rerio
ENSHBUG00000012290	hnrnpub	99	52.000	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSHBUG00000012290	hnrnpub	80	56.231	ENSDORG00000015491	Hnrnpu	74	58.140	Dipodomys_ordii
ENSHBUG00000012290	hnrnpub	85	83.333	ENSETEG00000014565	HNRNPU	78	83.333	Echinops_telfairi
ENSHBUG00000012290	hnrnpub	81	57.231	ENSEASG00005003017	HNRNPU	75	57.186	Equus_asinus_asinus
ENSHBUG00000012290	hnrnpub	81	57.077	ENSECAG00000007955	HNRNPU	75	57.036	Equus_caballus
ENSHBUG00000012290	hnrnpub	100	72.813	ENSELUG00000010733	hnrnpub	100	72.824	Esox_lucius
ENSHBUG00000012290	hnrnpub	80	57.680	ENSFCAG00000002156	HNRNPU	74	57.380	Felis_catus
ENSHBUG00000012290	hnrnpub	94	60.526	ENSFDAG00000006026	HNRNPU	99	85.714	Fukomys_damarensis
ENSHBUG00000012290	hnrnpub	100	79.661	ENSFHEG00000022639	hnrnpub	100	80.508	Fundulus_heteroclitus
ENSHBUG00000012290	hnrnpub	100	72.289	ENSGMOG00000001755	hnrnpub	99	71.636	Gadus_morhua
ENSHBUG00000012290	hnrnpub	87	68.966	ENSGALG00000010671	HNRNPU	78	68.966	Gallus_gallus
ENSHBUG00000012290	hnrnpub	100	80.502	ENSGAFG00000009369	hnrnpub	100	80.072	Gambusia_affinis
ENSHBUG00000012290	hnrnpub	100	75.234	ENSGACG00000004679	hnrnpub	99	75.350	Gasterosteus_aculeatus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSGGOG00000004061	HNRNPU	78	83.333	Gorilla_gorilla
ENSHBUG00000012290	hnrnpub	85	85.714	ENSHGLG00000010594	-	76	85.714	Heterocephalus_glaber_female
ENSHBUG00000012290	hnrnpub	92	85.714	ENSHGLG00100015093	HNRNPU	99	74.138	Heterocephalus_glaber_male
ENSHBUG00000012290	hnrnpub	85	77.114	ENSHCOG00000020091	hnrnpub	100	74.668	Hippocampus_comes
ENSHBUG00000012290	hnrnpub	80	91.304	ENSIPUG00000007749	hnrnpu	92	78.947	Ictalurus_punctatus
ENSHBUG00000012290	hnrnpub	86	78.723	ENSJJAG00000011371	Hnrnpu	79	78.723	Jaculus_jaculus
ENSHBUG00000012290	hnrnpub	100	82.641	ENSKMAG00000004532	hnrnpub	100	82.641	Kryptolebias_marmoratus
ENSHBUG00000012290	hnrnpub	100	84.963	ENSLBEG00000022520	hnrnpub	100	85.452	Labrus_bergylta
ENSHBUG00000012290	hnrnpub	81	52.968	ENSLACG00000017463	HNRNPU	80	82.609	Latimeria_chalumnae
ENSHBUG00000012290	hnrnpub	88	93.478	ENSLOCG00000016652	hnrnpua	78	93.478	Lepisosteus_oculatus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSLAFG00000021377	HNRNPU	81	83.333	Loxodonta_africana
ENSHBUG00000012290	hnrnpub	85	83.333	ENSMFAG00000037308	HNRNPU	78	83.333	Macaca_fascicularis
ENSHBUG00000012290	hnrnpub	80	57.098	ENSMMUG00000021098	HNRNPU	75	57.229	Macaca_mulatta
ENSHBUG00000012290	hnrnpub	85	83.333	ENSMNEG00000043645	HNRNPU	78	83.333	Macaca_nemestrina
ENSHBUG00000012290	hnrnpub	100	87.005	ENSMAMG00000007196	hnrnpub	100	87.252	Mastacembelus_armatus
ENSHBUG00000012290	hnrnpub	100	99.499	ENSMZEG00005003185	hnrnpub	100	99.499	Maylandia_zebra
ENSHBUG00000012290	hnrnpub	88	78.723	ENSMAUG00000008842	Hnrnpu	82	78.723	Mesocricetus_auratus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSMICG00000004616	HNRNPU	75	83.333	Microcebus_murinus
ENSHBUG00000012290	hnrnpub	88	78.723	ENSMOCG00000015623	Hnrnpu	79	78.723	Microtus_ochrogaster
ENSHBUG00000012290	hnrnpub	85	83.333	ENSMODG00000006515	HNRNPU	77	83.333	Monodelphis_domestica
ENSHBUG00000012290	hnrnpub	96	87.063	ENSMALG00000018243	hnrnpub	98	86.252	Monopterus_albus
ENSHBUG00000012290	hnrnpub	86	78.723	MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	Mus_caroli
ENSHBUG00000012290	hnrnpub	86	78.723	MGP_PahariEiJ_G0028193	Hnrnpu	81	78.723	Mus_pahari
ENSHBUG00000012290	hnrnpub	85	80.952	ENSMLUG00000000475	HNRNPU	80	77.083	Myotis_lucifugus
ENSHBUG00000012290	hnrnpub	80	56.231	ENSNGAG00000019075	Hnrnpu	75	57.229	Nannospalax_galili
ENSHBUG00000012290	hnrnpub	100	99.123	ENSNBRG00000017855	hnrnpub	100	99.123	Neolamprologus_brichardi
ENSHBUG00000012290	hnrnpub	78	83.333	ENSMEUG00000000541	HNRNPU	90	83.333	Notamacropus_eugenii
ENSHBUG00000012290	hnrnpub	100	95.489	ENSONIG00000001260	hnrnpub	100	95.489	Oreochromis_niloticus
ENSHBUG00000012290	hnrnpub	83	83.333	ENSOCUG00000014469	HNRNPU	69	83.333	Oryctolagus_cuniculus
ENSHBUG00000012290	hnrnpub	100	82.077	ENSORLG00000016114	hnrnpub	100	82.571	Oryzias_latipes
ENSHBUG00000012290	hnrnpub	100	81.413	ENSORLG00020005363	hnrnpub	100	82.942	Oryzias_latipes_hni
ENSHBUG00000012290	hnrnpub	100	81.289	ENSORLG00015001190	hnrnpub	100	82.818	Oryzias_latipes_hsok
ENSHBUG00000012290	hnrnpub	100	82.156	ENSOMEG00000014951	hnrnpub	100	82.571	Oryzias_melastigma
ENSHBUG00000012290	hnrnpub	80	57.590	ENSOGAG00000014024	HNRNPU	80	83.333	Otolemur_garnettii
ENSHBUG00000012290	hnrnpub	85	83.333	ENSOARG00000004985	HNRNPU	85	83.333	Ovis_aries
ENSHBUG00000012290	hnrnpub	85	83.333	ENSPPAG00000038652	HNRNPU	78	83.333	Pan_paniscus
ENSHBUG00000012290	hnrnpub	87	83.333	ENSPPRG00000002662	HNRNPU	78	83.333	Panthera_pardus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSPTRG00000002182	HNRNPU	79	83.333	Pan_troglodytes
ENSHBUG00000012290	hnrnpub	80	57.098	ENSPANG00000011643	HNRNPU	79	60.413	Papio_anubis
ENSHBUG00000012290	hnrnpub	100	67.153	ENSPKIG00000006885	hnrnpua	100	65.735	Paramormyrops_kingsleyae
ENSHBUG00000012290	hnrnpub	100	68.254	ENSPKIG00000022332	hnrnpub	100	66.830	Paramormyrops_kingsleyae
ENSHBUG00000012290	hnrnpub	85	83.333	ENSPCIG00000008657	HNRNPU	77	83.333	Phascolarctos_cinereus
ENSHBUG00000012290	hnrnpub	100	81.951	ENSPFOG00000002908	hnrnpub	100	82.561	Poecilia_formosa
ENSHBUG00000012290	hnrnpub	100	81.463	ENSPLAG00000004160	hnrnpub	100	82.317	Poecilia_latipinna
ENSHBUG00000012290	hnrnpub	80	56.338	ENSPCOG00000003883	-	77	56.090	Propithecus_coquereli
ENSHBUG00000012290	hnrnpub	85	83.333	ENSPCOG00000018655	-	76	83.333	Propithecus_coquereli
ENSHBUG00000012290	hnrnpub	85	83.333	ENSPVAG00000002581	HNRNPU	78	83.333	Pteropus_vampyrus
ENSHBUG00000012290	hnrnpub	100	99.624	ENSPNYG00000021642	hnrnpub	100	99.624	Pundamilia_nyererei
ENSHBUG00000012290	hnrnpub	100	67.072	ENSPNAG00000001055	hnrnpub	100	66.258	Pygocentrus_nattereri
ENSHBUG00000012290	hnrnpub	80	52.914	ENSRNOG00000033790	Hnrnpu	75	57.380	Rattus_norvegicus
ENSHBUG00000012290	hnrnpub	80	56.474	ENSRBIG00000031519	HNRNPU	78	59.725	Rhinopithecus_bieti
ENSHBUG00000012290	hnrnpub	82	55.807	ENSRROG00000041642	HNRNPU	76	61.552	Rhinopithecus_roxellana
ENSHBUG00000012290	hnrnpub	100	66.102	ENSSFOG00015019004	hnrnpu	99	63.446	Scleropages_formosus
ENSHBUG00000012290	hnrnpub	100	67.636	ENSSFOG00015001124	hnrnpub	82	73.196	Scleropages_formosus
ENSHBUG00000012290	hnrnpub	100	80.737	ENSSMAG00000003607	hnrnpub	100	82.283	Scophthalmus_maximus
ENSHBUG00000012290	hnrnpub	100	87.377	ENSSDUG00000005912	hnrnpub	100	88.113	Seriola_dumerili
ENSHBUG00000012290	hnrnpub	100	87.057	ENSSLDG00000004899	hnrnpub	100	86.935	Seriola_lalandi_dorsalis
ENSHBUG00000012290	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	79	83.333	Sphenodon_punctatus
ENSHBUG00000012290	hnrnpub	100	86.973	ENSSPAG00000011853	hnrnpub	100	86.973	Stegastes_partitus
ENSHBUG00000012290	hnrnpub	85	83.333	ENSSSCG00000010877	HNRNPU	80	83.333	Sus_scrofa
ENSHBUG00000012290	hnrnpub	100	78.007	ENSTRUG00000007759	hnrnpub	100	79.243	Takifugu_rubripes
ENSHBUG00000012290	hnrnpub	85	83.333	ENSUAMG00000021120	HNRNPU	78	83.333	Ursus_americanus
ENSHBUG00000012290	hnrnpub	85	74.419	ENSUMAG00000012322	HNRNPU	83	74.419	Ursus_maritimus
ENSHBUG00000012290	hnrnpub	78	83.333	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSHBUG00000012290	hnrnpub	80	57.590	ENSVVUG00000026524	HNRNPU	75	57.380	Vulpes_vulpes
ENSHBUG00000012290	hnrnpub	99	50.118	ENSXETG00000011386	hnrnpu	77	53.372	Xenopus_tropicalis
ENSHBUG00000012290	hnrnpub	100	83.171	ENSXMAG00000010356	hnrnpub	100	83.659	Xiphophorus_maculatus