EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012323 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 605 bases
Position: chrJH425398.1:93367-93971
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010760	SM-ATX	PF14438.6	2.6e-08	1	1
ENSHBUP00000010760	LSM14	PF12701.7	3.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000031839	-	318	-	ENSHBUP00000010760	105 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000012323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012323's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012323	-	95	64.000	ENSHBUG00000011864	-	75	64.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012323	-	90	71.579	ENSAPOG00000009997	-	88	71.579	Acanthochromis_polyacanthus
ENSHBUG00000012323	-	94	85.859	ENSACIG00000003134	-	80	85.859	Amphilophus_citrinellus
ENSHBUG00000012323	-	89	77.419	ENSAPEG00000013779	-	92	77.419	Amphiprion_percula
ENSHBUG00000012323	-	76	86.250	ENSATEG00000015882	-	91	86.250	Anabas_testudineus
ENSHBUG00000012323	-	87	64.835	ENSCVAG00000005570	-	94	64.835	Cyprinodon_variegatus
ENSHBUG00000012323	-	90	84.043	ENSCVAG00000012411	-	97	84.043	Cyprinodon_variegatus
ENSHBUG00000012323	-	90	85.106	ENSGAFG00000013718	-	97	85.106	Gambusia_affinis
ENSHBUG00000012323	-	87	63.736	ENSHCOG00000004862	-	83	63.736	Hippocampus_comes
ENSHBUG00000012323	-	90	81.915	ENSKMAG00000012850	-	97	81.915	Kryptolebias_marmoratus
ENSHBUG00000012323	-	84	79.545	ENSKMAG00000016674	-	85	81.053	Kryptolebias_marmoratus
ENSHBUG00000012323	-	94	80.198	ENSLBEG00000007971	-	97	80.198	Labrus_bergylta
ENSHBUG00000012323	-	86	70.000	ENSLBEG00000016427	lsm14b	63	70.000	Labrus_bergylta
ENSHBUG00000012323	-	87	70.330	ENSNGAG00000016305	-	73	70.330	Nannospalax_galili
ENSHBUG00000012323	-	95	65.000	ENSNBRG00000022606	-	75	65.000	Neolamprologus_brichardi
ENSHBUG00000012323	-	100	96.190	ENSNBRG00000022370	-	100	96.190	Neolamprologus_brichardi
ENSHBUG00000012323	-	90	77.895	ENSORLG00020018184	-	97	77.895	Oryzias_latipes_hni
ENSHBUG00000012323	-	74	76.923	ENSOMEG00000007241	-	94	76.923	Oryzias_melastigma
ENSHBUG00000012323	-	87	72.527	ENSPKIG00000003275	lsm14b	84	72.527	Paramormyrops_kingsleyae
ENSHBUG00000012323	-	90	67.368	ENSPMGG00000014569	lsm14b	59	67.368	Periophthalmus_magnuspinnatus
ENSHBUG00000012323	-	73	74.026	ENSPMGG00000004595	-	78	74.026	Periophthalmus_magnuspinnatus
ENSHBUG00000012323	-	75	82.278	ENSPREG00000007817	-	91	82.278	Poecilia_reticulata
ENSHBUG00000012323	-	87	67.033	ENSPREG00000016484	-	59	67.033	Poecilia_reticulata
ENSHBUG00000012323	-	95	64.000	ENSPNYG00000019601	-	75	64.000	Pundamilia_nyererei
ENSHBUG00000012323	-	100	100.000	ENSPNYG00000021706	-	99	100.000	Pundamilia_nyererei
ENSHBUG00000012323	-	79	84.337	ENSSLDG00000011341	-	90	84.337	Seriola_lalandi_dorsalis
ENSHBUG00000012323	-	79	84.337	ENSSLDG00000012686	-	90	84.337	Seriola_lalandi_dorsalis
ENSHBUG00000012323	-	77	66.667	ENSSLDG00000011706	-	88	66.667	Seriola_lalandi_dorsalis
ENSHBUG00000012323	-	89	77.419	ENSSPAG00000018837	-	92	77.419	Stegastes_partitus
ENSHBUG00000012323	-	87	67.033	ENSXCOG00000017365	-	92	67.033	Xiphophorus_couchianus
ENSHBUG00000012323	-	80	83.333	ENSXCOG00000011423	-	92	83.333	Xiphophorus_couchianus
ENSHBUG00000012323	-	80	83.333	ENSXMAG00000015481	-	92	83.333	Xiphophorus_maculatus