EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000012436 (Gene tree)
Gene ID: 102291962
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 9463 bases
Position: chrJH426627.1:50-9512
Accession: 102291962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000028586	TruB_N	PF01509.18	4.4e-19	1	1
ENSHBUP00000028586	PUA	PF01472.20	1.4e-16	1	1
ENSHBUP00000028586	DKCLD	PF08068.12	5.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000017854	-	4909	XM_005951986	ENSHBUP00000028586	500 (aa)	XP_005952048	UPI0003BCFB71

Gene Model

Click here to download ENSHBUG00000012436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012436	dkc1	86	80.361	ENSG00000130826	DKC1	99	87.317	Homo_sapiens
ENSHBUG00000012436	dkc1	99	88.538	ENSAPOG00000007799	dkc1	99	88.538	Acanthochromis_polyacanthus
ENSHBUG00000012436	dkc1	84	83.732	ENSAMEG00000002776	DKC1	82	83.732	Ailuropoda_melanoleuca
ENSHBUG00000012436	dkc1	95	90.814	ENSACIG00000022614	dkc1	97	90.814	Amphilophus_citrinellus
ENSHBUG00000012436	dkc1	99	88.757	ENSAOCG00000013159	dkc1	95	88.060	Amphiprion_ocellaris
ENSHBUG00000012436	dkc1	99	88.757	ENSAPEG00000002284	dkc1	99	88.757	Amphiprion_percula
ENSHBUG00000012436	dkc1	87	87.838	ENSATEG00000013682	dkc1	94	86.667	Anabas_testudineus
ENSHBUG00000012436	dkc1	86	79.910	ENSACAG00000015600	DKC1	80	78.233	Anolis_carolinensis
ENSHBUG00000012436	dkc1	86	80.587	ENSANAG00000022732	DKC1	86	80.952	Aotus_nancymaae
ENSHBUG00000012436	dkc1	96	93.946	ENSACLG00000015605	dkc1	98	93.946	Astatotilapia_calliptera
ENSHBUG00000012436	dkc1	90	85.495	ENSAMXG00000017108	dkc1	99	83.041	Astyanax_mexicanus
ENSHBUG00000012436	dkc1	93	77.253	ENSBTAG00000013045	DKC1	87	80.317	Bos_taurus
ENSHBUG00000012436	dkc1	81	65.517	WBGene00010478	K01G5.5	94	62.850	Caenorhabditis_elegans
ENSHBUG00000012436	dkc1	86	81.179	ENSCJAG00000004210	DKC1	85	81.549	Callithrix_jacchus
ENSHBUG00000012436	dkc1	89	79.018	ENSCAFG00000019620	-	81	82.660	Canis_familiaris
ENSHBUG00000012436	dkc1	88	71.364	ENSCAFG00000009311	-	78	76.768	Canis_familiaris
ENSHBUG00000012436	dkc1	79	75.758	ENSCAFG00020009379	-	75	75.758	Canis_lupus_dingo
ENSHBUG00000012436	dkc1	89	79.018	ENSCAFG00020008918	-	81	82.660	Canis_lupus_dingo
ENSHBUG00000012436	dkc1	92	77.056	ENSCHIG00000017392	DKC1	86	80.594	Capra_hircus
ENSHBUG00000012436	dkc1	86	79.379	ENSTSYG00000007681	DKC1	86	79.379	Carlito_syrichta
ENSHBUG00000012436	dkc1	80	80.929	ENSCAPG00000003342	DKC1	92	81.188	Cavia_aperea
ENSHBUG00000012436	dkc1	89	78.834	ENSCPOG00000008825	DKC1	90	78.618	Cavia_porcellus
ENSHBUG00000012436	dkc1	86	71.106	ENSCCAG00000027418	DKC1	85	71.106	Cebus_capucinus
ENSHBUG00000012436	dkc1	86	79.910	ENSCATG00000033602	DKC1	86	80.272	Cercocebus_atys
ENSHBUG00000012436	dkc1	86	80.499	ENSCLAG00000000720	DKC1	87	80.499	Chinchilla_lanigera
ENSHBUG00000012436	dkc1	86	79.910	ENSCSAG00000006706	DKC1	86	80.272	Chlorocebus_sabaeus
ENSHBUG00000012436	dkc1	91	78.419	ENSCPBG00000005858	DKC1	90	84.086	Chrysemys_picta_bellii
ENSHBUG00000012436	dkc1	79	80.253	ENSCING00000004599	-	83	74.371	Ciona_intestinalis
ENSHBUG00000012436	dkc1	79	80.203	ENSCSAVG00000010047	-	93	76.372	Ciona_savignyi
ENSHBUG00000012436	dkc1	86	79.910	ENSCANG00000027987	DKC1	86	80.272	Colobus_angolensis_palliatus
ENSHBUG00000012436	dkc1	78	65.039	ENSCGRG00001016789	-	79	66.757	Cricetulus_griseus_chok1gshd
ENSHBUG00000012436	dkc1	98	74.213	ENSCGRG00001014574	-	94	75.720	Cricetulus_griseus_chok1gshd
ENSHBUG00000012436	dkc1	98	74.213	ENSCGRG00000016075	-	94	75.720	Cricetulus_griseus_crigri
ENSHBUG00000012436	dkc1	78	65.039	ENSCGRG00000014809	-	77	66.757	Cricetulus_griseus_crigri
ENSHBUG00000012436	dkc1	93	86.081	ENSCSEG00000012633	dkc1	96	86.177	Cynoglossus_semilaevis
ENSHBUG00000012436	dkc1	93	89.103	ENSCVAG00000010155	dkc1	91	89.103	Cyprinodon_variegatus
ENSHBUG00000012436	dkc1	87	88.710	ENSDARG00000016484	dkc1	97	84.146	Danio_rerio
ENSHBUG00000012436	dkc1	86	81.081	ENSDNOG00000004218	DKC1	86	81.081	Dasypus_novemcinctus
ENSHBUG00000012436	dkc1	59	70.000	ENSDORG00000013566	-	100	70.000	Dipodomys_ordii
ENSHBUG00000012436	dkc1	86	69.655	FBgn0259937	Nop60B	88	71.000	Drosophila_melanogaster
ENSHBUG00000012436	dkc1	86	78.781	ENSETEG00000016095	DKC1	90	78.781	Echinops_telfairi
ENSHBUG00000012436	dkc1	66	78.419	ENSEBUG00000015962	dkc1	98	82.474	Eptatretus_burgeri
ENSHBUG00000012436	dkc1	51	61.265	ENSEBUG00000016062	dkc1	98	61.265	Eptatretus_burgeri
ENSHBUG00000012436	dkc1	92	77.174	ENSEASG00005007484	DKC1	77	85.323	Equus_asinus_asinus
ENSHBUG00000012436	dkc1	95	75.949	ENSECAG00000023524	DKC1	77	85.323	Equus_caballus
ENSHBUG00000012436	dkc1	78	86.701	ENSEEUG00000003323	DKC1	99	82.339	Erinaceus_europaeus
ENSHBUG00000012436	dkc1	90	87.333	ENSELUG00000014538	dkc1	95	84.679	Esox_lucius
ENSHBUG00000012436	dkc1	84	83.649	ENSFCAG00000006577	DKC1	83	83.412	Felis_catus
ENSHBUG00000012436	dkc1	85	82.005	ENSFALG00000011496	DKC1	85	81.696	Ficedula_albicollis
ENSHBUG00000012436	dkc1	89	78.652	ENSFDAG00000002516	DKC1	87	80.742	Fukomys_damarensis
ENSHBUG00000012436	dkc1	90	89.310	ENSFHEG00000004627	dkc1	97	88.501	Fundulus_heteroclitus
ENSHBUG00000012436	dkc1	78	89.258	ENSGMOG00000017277	dkc1	100	89.258	Gadus_morhua
ENSHBUG00000012436	dkc1	88	81.858	ENSGALG00000005054	DKC1	89	79.956	Gallus_gallus
ENSHBUG00000012436	dkc1	90	90.487	ENSGAFG00000011486	dkc1	82	89.979	Gambusia_affinis
ENSHBUG00000012436	dkc1	80	93.467	ENSGACG00000004373	dkc1	96	94.529	Gasterosteus_aculeatus
ENSHBUG00000012436	dkc1	91	79.060	ENSGAGG00000011330	DKC1	89	80.610	Gopherus_agassizii
ENSHBUG00000012436	dkc1	86	80.361	ENSGGOG00000001045	DKC1	86	80.726	Gorilla_gorilla
ENSHBUG00000012436	dkc1	80	85.287	ENSHGLG00000000649	DKC1	91	77.707	Heterocephalus_glaber_female
ENSHBUG00000012436	dkc1	80	85.287	ENSHGLG00100001153	DKC1	92	77.707	Heterocephalus_glaber_male
ENSHBUG00000012436	dkc1	97	85.391	ENSHCOG00000021099	dkc1	95	85.391	Hippocampus_comes
ENSHBUG00000012436	dkc1	89	85.746	ENSIPUG00000010309	dkc1	100	82.785	Ictalurus_punctatus
ENSHBUG00000012436	dkc1	86	74.074	ENSSTOG00000020149	-	85	74.074	Ictidomys_tridecemlineatus
ENSHBUG00000012436	dkc1	86	80.135	ENSSTOG00000001074	-	91	80.135	Ictidomys_tridecemlineatus
ENSHBUG00000012436	dkc1	86	69.213	ENSSTOG00000011904	-	82	69.213	Ictidomys_tridecemlineatus
ENSHBUG00000012436	dkc1	55	72.924	ENSJJAG00000010086	-	92	72.924	Jaculus_jaculus
ENSHBUG00000012436	dkc1	90	87.082	ENSKMAG00000008010	dkc1	95	87.579	Kryptolebias_marmoratus
ENSHBUG00000012436	dkc1	90	91.091	ENSLBEG00000019122	dkc1	97	90.084	Labrus_bergylta
ENSHBUG00000012436	dkc1	91	79.303	ENSLACG00000014025	DKC1	91	85.464	Latimeria_chalumnae
ENSHBUG00000012436	dkc1	91	84.783	ENSLOCG00000013713	dkc1	88	88.626	Lepisosteus_oculatus
ENSHBUG00000012436	dkc1	86	80.856	ENSLAFG00000000221	DKC1	86	80.856	Loxodonta_africana
ENSHBUG00000012436	dkc1	86	79.910	ENSMFAG00000032398	DKC1	74	79.910	Macaca_fascicularis
ENSHBUG00000012436	dkc1	86	79.910	ENSMMUG00000005768	DKC1	86	80.272	Macaca_mulatta
ENSHBUG00000012436	dkc1	86	79.910	ENSMNEG00000034503	DKC1	86	80.272	Macaca_nemestrina
ENSHBUG00000012436	dkc1	86	79.910	ENSMLEG00000034422	DKC1	86	80.272	Mandrillus_leucophaeus
ENSHBUG00000012436	dkc1	84	91.686	ENSMAMG00000005427	dkc1	91	93.842	Mastacembelus_armatus
ENSHBUG00000012436	dkc1	100	99.800	ENSMZEG00005014503	dkc1	100	99.800	Maylandia_zebra
ENSHBUG00000012436	dkc1	77	85.354	ENSMGAG00000009238	DKC1	94	79.493	Meleagris_gallopavo
ENSHBUG00000012436	dkc1	59	69.333	ENSMAUG00000016454	-	100	69.333	Mesocricetus_auratus
ENSHBUG00000012436	dkc1	86	79.634	ENSMICG00000038751	-	87	79.634	Microcebus_murinus
ENSHBUG00000012436	dkc1	79	73.284	ENSMICG00000002818	-	99	76.099	Microcebus_murinus
ENSHBUG00000012436	dkc1	59	65.667	ENSMOCG00000001169	-	100	65.667	Microtus_ochrogaster
ENSHBUG00000012436	dkc1	82	94.118	ENSMMOG00000020348	dkc1	87	94.236	Mola_mola
ENSHBUG00000012436	dkc1	80	85.965	ENSMODG00000009243	DKC1	69	85.965	Monodelphis_domestica
ENSHBUG00000012436	dkc1	99	86.600	ENSMALG00000009454	dkc1	96	86.299	Monopterus_albus
ENSHBUG00000012436	dkc1	86	69.799	MGP_CAROLIEiJ_G0033191	Dkc1	86	81.746	Mus_caroli
ENSHBUG00000012436	dkc1	86	80.317	ENSMUSG00000031403	Dkc1	100	69.667	Mus_musculus
ENSHBUG00000012436	dkc1	95	75.258	MGP_PahariEiJ_G0031735	Dkc1	98	73.715	Mus_pahari
ENSHBUG00000012436	dkc1	86	80.317	MGP_SPRETEiJ_G0034351	Dkc1	100	69.667	Mus_spretus
ENSHBUG00000012436	dkc1	92	78.308	ENSMPUG00000016136	DKC1	77	83.732	Mustela_putorius_furo
ENSHBUG00000012436	dkc1	83	80.476	ENSMLUG00000011918	DKC1	96	72.691	Myotis_lucifugus
ENSHBUG00000012436	dkc1	56	72.401	ENSNGAG00000015724	-	92	72.401	Nannospalax_galili
ENSHBUG00000012436	dkc1	84	97.381	ENSNBRG00000005638	dkc1	85	97.381	Neolamprologus_brichardi
ENSHBUG00000012436	dkc1	86	80.135	ENSNLEG00000014323	DKC1	86	80.499	Nomascus_leucogenys
ENSHBUG00000012436	dkc1	91	75.551	ENSMEUG00000001066	DKC1	97	75.330	Notamacropus_eugenii
ENSHBUG00000012436	dkc1	70	80.172	ENSOPRG00000005248	DKC1	69	80.172	Ochotona_princeps
ENSHBUG00000012436	dkc1	80	87.032	ENSODEG00000011816	-	86	82.192	Octodon_degus
ENSHBUG00000012436	dkc1	59	70.000	ENSODEG00000000549	-	100	69.667	Octodon_degus
ENSHBUG00000012436	dkc1	100	96.614	ENSONIG00000013889	dkc1	100	96.614	Oreochromis_niloticus
ENSHBUG00000012436	dkc1	56	62.000	ENSOANG00000022295	-	84	62.126	Ornithorhynchus_anatinus
ENSHBUG00000012436	dkc1	84	83.178	ENSOANG00000008713	-	96	78.925	Ornithorhynchus_anatinus
ENSHBUG00000012436	dkc1	85	80.410	ENSOCUG00000012646	DKC1	86	80.410	Oryctolagus_cuniculus
ENSHBUG00000012436	dkc1	90	86.253	ENSORLG00000018748	dkc1	90	85.714	Oryzias_latipes
ENSHBUG00000012436	dkc1	100	85.030	ENSOMEG00000005786	dkc1	90	85.597	Oryzias_melastigma
ENSHBUG00000012436	dkc1	89	77.590	ENSOGAG00000003399	DKC1	90	77.378	Otolemur_garnettii
ENSHBUG00000012436	dkc1	92	77.273	ENSOARG00000003047	DKC1	86	80.594	Ovis_aries
ENSHBUG00000012436	dkc1	86	80.361	ENSPPAG00000023820	DKC1	86	80.726	Pan_paniscus
ENSHBUG00000012436	dkc1	84	83.649	ENSPPRG00000009104	DKC1	83	83.412	Panthera_pardus
ENSHBUG00000012436	dkc1	85	81.925	ENSPTIG00000017469	DKC1	86	81.925	Panthera_tigris_altaica
ENSHBUG00000012436	dkc1	96	75.813	ENSPTRG00000043416	-	82	75.813	Pan_troglodytes
ENSHBUG00000012436	dkc1	86	80.361	ENSPTRG00000022449	DKC1	86	80.726	Pan_troglodytes
ENSHBUG00000012436	dkc1	86	79.910	ENSPANG00000011978	DKC1	86	80.272	Papio_anubis
ENSHBUG00000012436	dkc1	90	85.558	ENSPKIG00000008443	dkc1	98	82.581	Paramormyrops_kingsleyae
ENSHBUG00000012436	dkc1	72	89.665	ENSPSIG00000013765	DKC1	86	89.665	Pelodiscus_sinensis
ENSHBUG00000012436	dkc1	91	79.114	ENSPMGG00000004097	dkc1	88	79.036	Periophthalmus_magnuspinnatus
ENSHBUG00000012436	dkc1	67	78.462	ENSPEMG00000013348	Dkc1	88	78.462	Peromyscus_maniculatus_bairdii
ENSHBUG00000012436	dkc1	80	85.786	ENSPCIG00000016706	DKC1	68	85.786	Phascolarctos_cinereus
ENSHBUG00000012436	dkc1	90	90.487	ENSPFOG00000018653	dkc1	95	90.188	Poecilia_formosa
ENSHBUG00000012436	dkc1	90	90.487	ENSPLAG00000003272	dkc1	86	90.188	Poecilia_latipinna
ENSHBUG00000012436	dkc1	90	90.487	ENSPMEG00000010413	dkc1	95	90.188	Poecilia_mexicana
ENSHBUG00000012436	dkc1	90	90.487	ENSPREG00000004100	dkc1	91	88.817	Poecilia_reticulata
ENSHBUG00000012436	dkc1	86	80.361	ENSPPYG00000020892	DKC1	86	80.726	Pongo_abelii
ENSHBUG00000012436	dkc1	75	85.829	ENSPCAG00000015034	DKC1	73	85.829	Procavia_capensis
ENSHBUG00000012436	dkc1	86	80.361	ENSPCOG00000026874	DKC1	86	80.726	Propithecus_coquereli
ENSHBUG00000012436	dkc1	86	81.250	ENSPVAG00000009222	DKC1	86	81.628	Pteropus_vampyrus
ENSHBUG00000012436	dkc1	96	94.297	ENSPNYG00000020063	dkc1	98	94.297	Pundamilia_nyererei
ENSHBUG00000012436	dkc1	90	84.934	ENSPNAG00000005780	dkc1	99	81.503	Pygocentrus_nattereri
ENSHBUG00000012436	dkc1	89	75.536	ENSRNOG00000055562	Dkc1	91	75.107	Rattus_norvegicus
ENSHBUG00000012436	dkc1	86	79.910	ENSRBIG00000028457	DKC1	74	79.910	Rhinopithecus_bieti
ENSHBUG00000012436	dkc1	86	79.910	ENSRROG00000044780	DKC1	86	80.272	Rhinopithecus_roxellana
ENSHBUG00000012436	dkc1	77	71.802	YLR175W	-	87	68.019	Saccharomyces_cerevisiae
ENSHBUG00000012436	dkc1	86	80.499	ENSSBOG00000033746	DKC1	85	80.499	Saimiri_boliviensis_boliviensis
ENSHBUG00000012436	dkc1	80	86.035	ENSSHAG00000002463	DKC1	85	86.035	Sarcophilus_harrisii
ENSHBUG00000012436	dkc1	90	84.565	ENSSFOG00015009585	dkc1	97	81.288	Scleropages_formosus
ENSHBUG00000012436	dkc1	89	88.419	ENSSMAG00000002552	dkc1	93	86.709	Scophthalmus_maximus
ENSHBUG00000012436	dkc1	99	88.822	ENSSDUG00000009963	dkc1	99	88.668	Seriola_dumerili
ENSHBUG00000012436	dkc1	91	87.939	ENSSLDG00000019342	dkc1	95	87.315	Seriola_lalandi_dorsalis
ENSHBUG00000012436	dkc1	86	78.054	ENSSARG00000001822	DKC1	88	78.507	Sorex_araneus
ENSHBUG00000012436	dkc1	80	85.213	ENSSPUG00000018907	DKC1	86	78.714	Sphenodon_punctatus
ENSHBUG00000012436	dkc1	94	87.083	ENSSPAG00000002585	dkc1	93	87.117	Stegastes_partitus
ENSHBUG00000012436	dkc1	95	76.160	ENSSSCG00000012823	DKC1	88	82.423	Sus_scrofa
ENSHBUG00000012436	dkc1	78	86.146	ENSTGUG00000006781	DKC1	95	81.321	Taeniopygia_guttata
ENSHBUG00000012436	dkc1	97	85.216	ENSTRUG00000004413	dkc1	97	84.394	Takifugu_rubripes
ENSHBUG00000012436	dkc1	90	71.121	ENSTNIG00000002582	dkc1	90	71.212	Tetraodon_nigroviridis
ENSHBUG00000012436	dkc1	57	80.333	ENSTBEG00000011262	DKC1	86	78.413	Tupaia_belangeri
ENSHBUG00000012436	dkc1	55	86.643	ENSTTRG00000008089	DKC1	55	86.643	Tursiops_truncatus
ENSHBUG00000012436	dkc1	92	77.874	ENSUAMG00000022721	DKC1	88	83.493	Ursus_americanus
ENSHBUG00000012436	dkc1	92	77.440	ENSUMAG00000016899	DKC1	97	84.925	Ursus_maritimus
ENSHBUG00000012436	dkc1	84	80.930	ENSVVUG00000020734	-	73	80.930	Vulpes_vulpes
ENSHBUG00000012436	dkc1	90	64.222	ENSVVUG00000021671	-	78	67.681	Vulpes_vulpes
ENSHBUG00000012436	dkc1	94	79.704	ENSXETG00000032517	DKC1	89	82.960	Xenopus_tropicalis
ENSHBUG00000012436	dkc1	87	89.908	ENSXCOG00000005498	dkc1	99	88.197	Xiphophorus_couchianus
ENSHBUG00000012436	dkc1	90	90.487	ENSXMAG00000004919	dkc1	97	89.050	Xiphophorus_maculatus