EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012462 (Gene tree)
Gene ID: 102304179
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 7193 bases
Position: chrJH425453.1:4170-11362
Accession: 102304179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010860	RRM_1	PF00076.22	5.7e-32	1	2
ENSHBUP00000010860	RRM_1	PF00076.22	5.7e-32	2	2
ENSHBUP00000028573	RRM_1	PF00076.22	5.7e-32	1	2
ENSHBUP00000028573	RRM_1	PF00076.22	5.7e-32	2	2
ENSHBUP00000010848	RRM_1	PF00076.22	6.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000017852	-	2954	XM_014336535	ENSHBUP00000010860	293 (aa)	XP_014192021	UPI0003BDA251
ENSHBUT00000017833	-	647	-	ENSHBUP00000010848	138 (aa)	-	-
ENSHBUT00000017952	-	2889	XM_005931508	ENSHBUP00000028573	293 (aa)	XP_005931570	UPI0003BDA251

Gene Model

Click here to download ENSHBUG00000012462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012462	srsf5b	90	60.484	ENSHBUG00000006386	-	76	52.896
ENSHBUG00000012462	srsf5b	50	75.362	ENSHBUG00000016897	-	63	75.362
ENSHBUG00000012462	srsf5b	91	44.275	ENSHBUG00000016788	srsf1a	66	43.333
ENSHBUG00000012462	srsf5b	77	36.697	ENSHBUG00000022402	-	51	36.697
ENSHBUG00000012462	srsf5b	93	34.586	ENSHBUG00000019320	srsf9	68	41.436
ENSHBUG00000012462	srsf5b	55	44.578	ENSHBUG00000003073	srsf3b	85	41.441
ENSHBUG00000012462	srsf5b	93	68.421	ENSHBUG00000014048	srsf5a	90	58.363
ENSHBUG00000012462	srsf5b	90	59.677	ENSHBUG00000011326	-	50	63.536
ENSHBUG00000012462	srsf5b	70	45.545	ENSHBUG00000015600	-	56	57.377
ENSHBUG00000012462	srsf5b	91	49.231	ENSHBUG00000015576	-	67	50.867

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012462	srsf5b	93	75.000	ENSG00000100650	SRSF5	98	76.562	Homo_sapiens
ENSHBUG00000012462	srsf5b	100	95.904	ENSAPOG00000008642	srsf5b	100	95.904	Acanthochromis_polyacanthus
ENSHBUG00000012462	srsf5b	93	75.000	ENSAMEG00000014574	SRSF5	67	81.481	Ailuropoda_melanoleuca
ENSHBUG00000012462	srsf5b	100	98.980	ENSACIG00000010742	srsf5b	100	98.980	Amphilophus_citrinellus
ENSHBUG00000012462	srsf5b	100	95.904	ENSAOCG00000005719	srsf5b	100	95.904	Amphiprion_ocellaris
ENSHBUG00000012462	srsf5b	100	95.904	ENSAPEG00000007830	srsf5b	100	95.904	Amphiprion_percula
ENSHBUG00000012462	srsf5b	93	98.438	ENSATEG00000019112	srsf5b	100	95.904	Anabas_testudineus
ENSHBUG00000012462	srsf5b	88	76.230	ENSAPLG00000014681	SRSF5	69	78.836	Anas_platyrhynchos
ENSHBUG00000012462	srsf5b	93	77.344	ENSACAG00000005143	SRSF5	69	83.069	Anolis_carolinensis
ENSHBUG00000012462	srsf5b	93	75.000	ENSANAG00000027977	-	76	90.667	Aotus_nancymaae
ENSHBUG00000012462	srsf5b	95	71.756	ENSANAG00000037529	-	97	73.282	Aotus_nancymaae
ENSHBUG00000012462	srsf5b	100	99.659	ENSACLG00000026424	srsf5b	100	99.659	Astatotilapia_calliptera
ENSHBUG00000012462	srsf5b	100	88.406	ENSAMXG00000011932	srsf5b	84	94.531	Astyanax_mexicanus
ENSHBUG00000012462	srsf5b	93	75.000	ENSBTAG00000011596	SRSF5	67	81.481	Bos_taurus
ENSHBUG00000012462	srsf5b	93	75.000	ENSCJAG00000014884	SRSF5	76	90.667	Callithrix_jacchus
ENSHBUG00000012462	srsf5b	93	75.000	ENSCAFG00000016589	SRSF5	67	81.481	Canis_familiaris
ENSHBUG00000012462	srsf5b	93	75.000	ENSCAFG00020005661	SRSF5	67	81.481	Canis_lupus_dingo
ENSHBUG00000012462	srsf5b	93	75.000	ENSCHIG00000016794	SRSF5	66	81.481	Capra_hircus
ENSHBUG00000012462	srsf5b	93	75.000	ENSTSYG00000007786	SRSF5	98	70.076	Carlito_syrichta
ENSHBUG00000012462	srsf5b	93	75.000	ENSCAPG00000008801	SRSF5	66	81.481	Cavia_aperea
ENSHBUG00000012462	srsf5b	93	75.000	ENSCPOG00000039926	SRSF5	92	70.943	Cavia_porcellus
ENSHBUG00000012462	srsf5b	93	75.000	ENSCCAG00000029002	SRSF5	76	90.667	Cebus_capucinus
ENSHBUG00000012462	srsf5b	93	75.000	ENSCATG00000045051	SRSF5	76	90.667	Cercocebus_atys
ENSHBUG00000012462	srsf5b	93	75.000	ENSCLAG00000004755	SRSF5	67	81.481	Chinchilla_lanigera
ENSHBUG00000012462	srsf5b	93	75.000	ENSCSAG00000013041	SRSF5	93	71.536	Chlorocebus_sabaeus
ENSHBUG00000012462	srsf5b	93	75.000	ENSCPBG00000021653	SRSF5	68	82.011	Chrysemys_picta_bellii
ENSHBUG00000012462	srsf5b	93	75.000	ENSCANG00000030560	SRSF5	76	90.667	Colobus_angolensis_palliatus
ENSHBUG00000012462	srsf5b	93	75.000	ENSCGRG00001015339	Srsf5	93	66.797	Cricetulus_griseus_chok1gshd
ENSHBUG00000012462	srsf5b	93	75.000	ENSCGRG00000009833	Srsf5	93	70.189	Cricetulus_griseus_crigri
ENSHBUG00000012462	srsf5b	93	97.692	ENSCSEG00000003801	srsf5b	100	91.186	Cynoglossus_semilaevis
ENSHBUG00000012462	srsf5b	93	99.219	ENSCVAG00000017240	srsf5b	88	86.760	Cyprinodon_variegatus
ENSHBUG00000012462	srsf5b	93	93.750	ENSDARG00000027734	srsf5b	90	93.750	Danio_rerio
ENSHBUG00000012462	srsf5b	93	75.000	ENSDNOG00000006160	SRSF5	68	81.481	Dasypus_novemcinctus
ENSHBUG00000012462	srsf5b	93	75.000	ENSDORG00000003989	Srsf5	68	81.481	Dipodomys_ordii
ENSHBUG00000012462	srsf5b	93	72.656	ENSETEG00000020396	SRSF5	68	78.723	Echinops_telfairi
ENSHBUG00000012462	srsf5b	93	56.618	ENSEBUG00000006229	srsf5b	95	46.429	Eptatretus_burgeri
ENSHBUG00000012462	srsf5b	93	75.000	ENSEASG00005016615	SRSF5	67	81.481	Equus_asinus_asinus
ENSHBUG00000012462	srsf5b	93	75.000	ENSECAG00000026873	SRSF5	88	76.562	Equus_caballus
ENSHBUG00000012462	srsf5b	93	93.284	ENSELUG00000019852	srsf5b	85	85.417	Esox_lucius
ENSHBUG00000012462	srsf5b	93	75.000	ENSFCAG00000008848	SRSF5	75	90.667	Felis_catus
ENSHBUG00000012462	srsf5b	93	76.562	ENSFALG00000004979	SRSF5	68	80.851	Ficedula_albicollis
ENSHBUG00000012462	srsf5b	93	75.000	ENSFDAG00000011562	SRSF5	68	81.481	Fukomys_damarensis
ENSHBUG00000012462	srsf5b	93	99.219	ENSFHEG00000009476	srsf5b	88	91.882	Fundulus_heteroclitus
ENSHBUG00000012462	srsf5b	95	86.331	ENSGMOG00000000595	srsf5b	99	80.088	Gadus_morhua
ENSHBUG00000012462	srsf5b	93	75.781	ENSGALG00000009421	SRSF5	88	75.781	Gallus_gallus
ENSHBUG00000012462	srsf5b	93	99.219	ENSGAFG00000002865	srsf5b	100	90.728	Gambusia_affinis
ENSHBUG00000012462	srsf5b	100	79.452	ENSGACG00000007834	srsf5b	86	87.500	Gasterosteus_aculeatus
ENSHBUG00000012462	srsf5b	93	75.000	ENSGAGG00000004447	SRSF5	68	82.011	Gopherus_agassizii
ENSHBUG00000012462	srsf5b	93	75.000	ENSGGOG00000016462	SRSF5	76	90.667	Gorilla_gorilla
ENSHBUG00000012462	srsf5b	93	74.219	ENSHGLG00000010147	SRSF5	67	80.952	Heterocephalus_glaber_female
ENSHBUG00000012462	srsf5b	54	78.667	ENSHGLG00100000095	-	62	58.889	Heterocephalus_glaber_male
ENSHBUG00000012462	srsf5b	93	74.219	ENSHGLG00100015328	SRSF5	67	80.952	Heterocephalus_glaber_male
ENSHBUG00000012462	srsf5b	93	85.606	ENSHCOG00000005592	srsf5b	100	75.920	Hippocampus_comes
ENSHBUG00000012462	srsf5b	93	75.000	ENSSTOG00000020672	SRSF5	67	81.481	Ictidomys_tridecemlineatus
ENSHBUG00000012462	srsf5b	93	75.000	ENSJJAG00000001688	Srsf5	67	81.481	Jaculus_jaculus
ENSHBUG00000012462	srsf5b	93	97.656	ENSKMAG00000020486	srsf5b	100	89.701	Kryptolebias_marmoratus
ENSHBUG00000012462	srsf5b	100	93.898	ENSLBEG00000013647	srsf5b	100	94.237	Labrus_bergylta
ENSHBUG00000012462	srsf5b	93	78.906	ENSLACG00000005874	SRSF5	68	82.979	Latimeria_chalumnae
ENSHBUG00000012462	srsf5b	93	81.203	ENSLOCG00000012438	srsf5b	70	83.938	Lepisosteus_oculatus
ENSHBUG00000012462	srsf5b	93	74.219	ENSLAFG00000005260	SRSF5	67	80.952	Loxodonta_africana
ENSHBUG00000012462	srsf5b	93	75.000	ENSMFAG00000002393	SRSF5	76	90.667	Macaca_fascicularis
ENSHBUG00000012462	srsf5b	93	75.000	ENSMNEG00000030872	SRSF5	76	90.667	Macaca_nemestrina
ENSHBUG00000012462	srsf5b	93	75.000	ENSMLEG00000030017	SRSF5	76	90.667	Mandrillus_leucophaeus
ENSHBUG00000012462	srsf5b	100	94.881	ENSMAMG00000002673	srsf5b	100	94.881	Mastacembelus_armatus
ENSHBUG00000012462	srsf5b	100	99.659	ENSMZEG00005003550	srsf5b	100	99.659	Maylandia_zebra
ENSHBUG00000012462	srsf5b	64	66.292	ENSMGAG00000011835	SRSF5	92	60.280	Meleagris_gallopavo
ENSHBUG00000012462	srsf5b	93	75.000	ENSMAUG00000009544	Srsf5	93	70.189	Mesocricetus_auratus
ENSHBUG00000012462	srsf5b	53	91.781	ENSMICG00000046738	-	74	90.667	Microcebus_murinus
ENSHBUG00000012462	srsf5b	93	75.000	ENSMICG00000037432	-	76	90.667	Microcebus_murinus
ENSHBUG00000012462	srsf5b	93	75.000	ENSMOCG00000013134	Srsf5	93	70.189	Microtus_ochrogaster
ENSHBUG00000012462	srsf5b	93	97.656	ENSMMOG00000000137	srsf5b	79	97.656	Mola_mola
ENSHBUG00000012462	srsf5b	93	75.000	ENSMODG00000011362	SRSF5	93	73.333	Monodelphis_domestica
ENSHBUG00000012462	srsf5b	100	93.919	ENSMALG00000021875	srsf5b	100	94.595	Monopterus_albus
ENSHBUG00000012462	srsf5b	93	75.000	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSHBUG00000012462	srsf5b	93	75.000	MGP_PahariEiJ_G0029659	Srsf5	93	70.189	Mus_pahari
ENSHBUG00000012462	srsf5b	93	75.000	ENSMPUG00000007458	SRSF5	67	81.481	Mustela_putorius_furo
ENSHBUG00000012462	srsf5b	93	75.000	ENSMLUG00000011939	SRSF5	91	65.169	Myotis_lucifugus
ENSHBUG00000012462	srsf5b	93	75.000	ENSNGAG00000010073	-	93	70.189	Nannospalax_galili
ENSHBUG00000012462	srsf5b	100	98.644	ENSNBRG00000001285	srsf5b	100	98.644	Neolamprologus_brichardi
ENSHBUG00000012462	srsf5b	93	75.000	ENSNLEG00000001615	SRSF5	76	90.667	Nomascus_leucogenys
ENSHBUG00000012462	srsf5b	93	75.000	ENSOPRG00000008286	SRSF5	91	71.642	Ochotona_princeps
ENSHBUG00000012462	srsf5b	93	74.219	ENSODEG00000000700	-	93	67.547	Octodon_degus
ENSHBUG00000012462	srsf5b	93	75.000	ENSODEG00000013469	-	68	81.481	Octodon_degus
ENSHBUG00000012462	srsf5b	100	99.659	ENSONIG00000005759	srsf5b	100	99.659	Oreochromis_niloticus
ENSHBUG00000012462	srsf5b	93	68.750	ENSOANG00000013336	SRSF5	68	77.778	Ornithorhynchus_anatinus
ENSHBUG00000012462	srsf5b	93	75.000	ENSOCUG00000009274	SRSF5	91	70.566	Oryctolagus_cuniculus
ENSHBUG00000012462	srsf5b	93	90.076	ENSORLG00000029854	srsf5b	100	79.751	Oryzias_latipes
ENSHBUG00000012462	srsf5b	93	94.615	ENSORLG00015001720	srsf5b	100	89.831	Oryzias_latipes_hsok
ENSHBUG00000012462	srsf5b	93	95.385	ENSOMEG00000020690	srsf5b	67	89.299	Oryzias_melastigma
ENSHBUG00000012462	srsf5b	93	75.000	ENSOGAG00000015122	SRSF5	67	81.481	Otolemur_garnettii
ENSHBUG00000012462	srsf5b	93	75.000	ENSPPAG00000029921	SRSF5	76	90.667	Pan_paniscus
ENSHBUG00000012462	srsf5b	93	75.000	ENSPPRG00000012903	SRSF5	75	90.667	Panthera_pardus
ENSHBUG00000012462	srsf5b	93	75.000	ENSPTIG00000018589	SRSF5	75	90.667	Panthera_tigris_altaica
ENSHBUG00000012462	srsf5b	93	75.000	ENSPTRG00000006488	SRSF5	76	90.667	Pan_troglodytes
ENSHBUG00000012462	srsf5b	93	75.000	ENSPANG00000021091	SRSF5	76	90.667	Papio_anubis
ENSHBUG00000012462	srsf5b	93	75.000	ENSPSIG00000012522	SRSF5	69	82.011	Pelodiscus_sinensis
ENSHBUG00000012462	srsf5b	93	95.312	ENSPMGG00000021646	srsf5b	91	95.312	Periophthalmus_magnuspinnatus
ENSHBUG00000012462	srsf5b	93	75.000	ENSPEMG00000020173	Srsf5	93	66.797	Peromyscus_maniculatus_bairdii
ENSHBUG00000012462	srsf5b	93	56.204	ENSPMAG00000007790	srsf5b	68	61.929	Petromyzon_marinus
ENSHBUG00000012462	srsf5b	93	75.000	ENSPCIG00000011877	SRSF5	93	73.333	Phascolarctos_cinereus
ENSHBUG00000012462	srsf5b	93	100.000	ENSPFOG00000017700	srsf5b	100	90.728	Poecilia_formosa
ENSHBUG00000012462	srsf5b	93	99.225	ENSPLAG00000006480	srsf5b	100	90.429	Poecilia_latipinna
ENSHBUG00000012462	srsf5b	93	100.000	ENSPMEG00000012751	srsf5b	100	90.728	Poecilia_mexicana
ENSHBUG00000012462	srsf5b	93	99.219	ENSPREG00000010381	srsf5b	100	90.728	Poecilia_reticulata
ENSHBUG00000012462	srsf5b	93	75.000	ENSPPYG00000005945	SRSF5	93	71.536	Pongo_abelii
ENSHBUG00000012462	srsf5b	93	74.219	ENSPCAG00000004405	SRSF5	100	79.605	Procavia_capensis
ENSHBUG00000012462	srsf5b	93	75.000	ENSPCOG00000014442	SRSF5	88	76.562	Propithecus_coquereli
ENSHBUG00000012462	srsf5b	100	96.928	ENSPNYG00000002669	srsf5b	100	96.928	Pundamilia_nyererei
ENSHBUG00000012462	srsf5b	100	87.681	ENSPNAG00000011262	srsf5b	84	93.750	Pygocentrus_nattereri
ENSHBUG00000012462	srsf5b	93	75.000	ENSRNOG00000005513	Srsf5	93	66.797	Rattus_norvegicus
ENSHBUG00000012462	srsf5b	93	75.000	ENSRBIG00000013003	SRSF5	76	90.667	Rhinopithecus_bieti
ENSHBUG00000012462	srsf5b	93	75.000	ENSRROG00000043407	SRSF5	76	90.667	Rhinopithecus_roxellana
ENSHBUG00000012462	srsf5b	93	75.000	ENSSBOG00000030784	SRSF5	76	90.667	Saimiri_boliviensis_boliviensis
ENSHBUG00000012462	srsf5b	93	75.000	ENSSHAG00000002871	SRSF5	93	73.333	Sarcophilus_harrisii
ENSHBUG00000012462	srsf5b	93	90.780	ENSSMAG00000019728	srsf5b	91	82.886	Scophthalmus_maximus
ENSHBUG00000012462	srsf5b	93	99.219	ENSSDUG00000005766	srsf5b	92	95.785	Seriola_dumerili
ENSHBUG00000012462	srsf5b	100	95.563	ENSSLDG00000023255	srsf5b	100	95.563	Seriola_lalandi_dorsalis
ENSHBUG00000012462	srsf5b	51	88.732	ENSSARG00000001059	SRSF5	99	60.616	Sorex_araneus
ENSHBUG00000012462	srsf5b	93	75.940	ENSSPUG00000002464	SRSF5	89	73.723	Sphenodon_punctatus
ENSHBUG00000012462	srsf5b	100	96.928	ENSSPAG00000015325	srsf5b	100	96.928	Stegastes_partitus
ENSHBUG00000012462	srsf5b	93	75.000	ENSSSCG00000032583	SRSF5	67	81.481	Sus_scrofa
ENSHBUG00000012462	srsf5b	93	76.562	ENSTGUG00000011425	SRSF5	88	62.132	Taeniopygia_guttata
ENSHBUG00000012462	srsf5b	93	90.625	ENSTRUG00000017811	srsf5b	100	76.161	Takifugu_rubripes
ENSHBUG00000012462	srsf5b	93	89.062	ENSTNIG00000016411	srsf5b	95	82.353	Tetraodon_nigroviridis
ENSHBUG00000012462	srsf5b	93	75.000	ENSTBEG00000001972	SRSF5	93	69.663	Tupaia_belangeri
ENSHBUG00000012462	srsf5b	92	74.803	ENSTTRG00000003318	SRSF5	66	81.383	Tursiops_truncatus
ENSHBUG00000012462	srsf5b	93	75.000	ENSUAMG00000014184	SRSF5	67	81.481	Ursus_americanus
ENSHBUG00000012462	srsf5b	93	75.781	ENSUMAG00000009827	SRSF5	67	81.481	Ursus_maritimus
ENSHBUG00000012462	srsf5b	93	75.000	ENSVPAG00000006448	SRSF5	67	81.481	Vicugna_pacos
ENSHBUG00000012462	srsf5b	93	75.000	ENSVVUG00000003790	SRSF5	67	81.481	Vulpes_vulpes
ENSHBUG00000012462	srsf5b	93	79.070	ENSXETG00000002211	srsf5	93	72.862	Xenopus_tropicalis
ENSHBUG00000012462	srsf5b	93	99.225	ENSXCOG00000001570	srsf5b	100	87.789	Xiphophorus_couchianus
ENSHBUG00000012462	srsf5b	93	99.225	ENSXMAG00000026416	srsf5b	100	90.099	Xiphophorus_maculatus