EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012495 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 13149 bases
Position: chrJH425405.1:155780-168928
Accession: 102305383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010909	KH_1	PF00013.29	1.1e-54	1	3
ENSHBUP00000010909	KH_1	PF00013.29	1.1e-54	2	3
ENSHBUP00000010909	KH_1	PF00013.29	1.1e-54	3	3
ENSHBUP00000010915	KH_1	PF00013.29	1.1e-54	1	3
ENSHBUP00000010915	KH_1	PF00013.29	1.1e-54	2	3
ENSHBUP00000010915	KH_1	PF00013.29	1.1e-54	3	3
ENSHBUP00000010909	KH_2	PF07650.17	1.6e-14	1	1
ENSHBUP00000010915	KH_2	PF07650.17	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000017913	-	2101	-	ENSHBUP00000010909	326 (aa)	-	-
ENSHBUT00000017936	-	2142	XM_014335090	ENSHBUP00000010915	326 (aa)	XP_014190576	-

Gene Model

Click here to download ENSHBUG00000012495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012495	zgc:110045	95	71.935	ENSHBUG00000010697	pcbp3	97	71.935
ENSHBUG00000012495	zgc:110045	96	35.461	ENSHBUG00000003126	igf2bp2a	68	35.461
ENSHBUG00000012495	zgc:110045	77	35.955	ENSHBUG00000014760	KHSRP	62	41.667
ENSHBUG00000012495	zgc:110045	68	40.580	ENSHBUG00000018561	nova1	84	32.558
ENSHBUG00000012495	zgc:110045	68	39.130	ENSHBUG00000002485	NOVA1	61	39.130
ENSHBUG00000012495	zgc:110045	98	75.155	ENSHBUG00000021782	-	99	75.155
ENSHBUG00000012495	zgc:110045	81	31.544	ENSHBUG00000009835	fubp1	84	31.897
ENSHBUG00000012495	zgc:110045	96	61.261	ENSHBUG00000005329	-	73	61.261
ENSHBUG00000012495	zgc:110045	70	37.879	ENSHBUG00000018543	khsrp	55	37.879
ENSHBUG00000012495	zgc:110045	77	44.286	ENSHBUG00000006535	hnrpkl	60	43.836
ENSHBUG00000012495	zgc:110045	95	32.432	ENSHBUG00000009868	igf2bp1	62	32.278
ENSHBUG00000012495	zgc:110045	74	42.857	ENSHBUG00000010255	hnrnpk	54	42.857
ENSHBUG00000012495	zgc:110045	97	32.911	ENSHBUG00000018217	igf2bp3	64	32.911
ENSHBUG00000012495	zgc:110045	96	70.405	ENSHBUG00000008769	pcbp2	97	70.405
ENSHBUG00000012495	zgc:110045	89	39.062	ENSHBUG00000022849	fubp3	68	39.062
ENSHBUG00000012495	zgc:110045	98	66.250	ENSHBUG00000009472	pcbp4	65	66.667
ENSHBUG00000012495	zgc:110045	96	72.293	ENSHBUG00000018512	PCBP2	97	72.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012495	zgc:110045	99	76.780	ENSG00000183570	PCBP3	99	68.785	Homo_sapiens
ENSHBUG00000012495	zgc:110045	100	99.080	ENSAPOG00000023735	zgc:110045	100	99.080	Acanthochromis_polyacanthus
ENSHBUG00000012495	zgc:110045	94	93.088	ENSACIG00000002577	zgc:110045	99	93.088	Amphilophus_citrinellus
ENSHBUG00000012495	zgc:110045	62	94.527	ENSAOCG00000005266	zgc:110045	94	94.527	Amphiprion_ocellaris
ENSHBUG00000012495	zgc:110045	97	98.101	ENSAPEG00000000729	zgc:110045	73	98.101	Amphiprion_percula
ENSHBUG00000012495	zgc:110045	93	88.546	ENSATEG00000011191	zgc:110045	65	88.546	Anabas_testudineus
ENSHBUG00000012495	zgc:110045	97	99.684	ENSACLG00000019285	zgc:110045	73	99.684	Astatotilapia_calliptera
ENSHBUG00000012495	zgc:110045	99	76.780	ENSBTAG00000030775	PCBP3	91	76.780	Bos_taurus
ENSHBUG00000012495	zgc:110045	99	72.515	ENSCAFG00000011907	PCBP3	91	72.515	Canis_familiaris
ENSHBUG00000012495	zgc:110045	99	69.971	ENSCHIG00000015841	PCBP3	90	69.971	Capra_hircus
ENSHBUG00000012495	zgc:110045	69	66.122	ENSTSYG00000005254	PCBP3	95	66.122	Carlito_syrichta
ENSHBUG00000012495	zgc:110045	99	56.342	ENSCAPG00000006767	PCBP3	83	56.342	Cavia_aperea
ENSHBUG00000012495	zgc:110045	99	72.303	ENSCPOG00000003648	PCBP3	91	72.303	Cavia_porcellus
ENSHBUG00000012495	zgc:110045	99	76.471	ENSCCAG00000024561	PCBP3	91	76.471	Cebus_capucinus
ENSHBUG00000012495	zgc:110045	99	76.780	ENSCATG00000038419	PCBP3	91	76.780	Cercocebus_atys
ENSHBUG00000012495	zgc:110045	99	72.303	ENSCLAG00000006667	PCBP3	91	72.303	Chinchilla_lanigera
ENSHBUG00000012495	zgc:110045	99	76.780	ENSCANG00000026757	PCBP3	91	76.780	Colobus_angolensis_palliatus
ENSHBUG00000012495	zgc:110045	99	72.303	ENSCGRG00001006836	Pcbp3	91	72.303	Cricetulus_griseus_chok1gshd
ENSHBUG00000012495	zgc:110045	99	72.303	ENSCGRG00000001837	Pcbp3	91	72.303	Cricetulus_griseus_crigri
ENSHBUG00000012495	zgc:110045	100	95.706	ENSCSEG00000010020	zgc:110045	100	95.706	Cynoglossus_semilaevis
ENSHBUG00000012495	zgc:110045	94	90.431	ENSCVAG00000004726	zgc:110045	93	90.431	Cyprinodon_variegatus
ENSHBUG00000012495	zgc:110045	67	79.724	ENSDARG00000057141	zgc:110045	97	79.724	Danio_rerio
ENSHBUG00000012495	zgc:110045	99	72.303	ENSDNOG00000049518	PCBP3	92	72.303	Dasypus_novemcinctus
ENSHBUG00000012495	zgc:110045	65	68.966	ENSDORG00000003640	Pcbp3	93	68.966	Dipodomys_ordii
ENSHBUG00000012495	zgc:110045	72	67.373	ENSEBUG00000009697	zgc:110045	99	67.606	Eptatretus_burgeri
ENSHBUG00000012495	zgc:110045	99	76.471	ENSEASG00005007068	PCBP3	91	76.471	Equus_asinus_asinus
ENSHBUG00000012495	zgc:110045	99	76.471	ENSECAG00000012413	PCBP3	91	76.471	Equus_caballus
ENSHBUG00000012495	zgc:110045	97	89.623	ENSELUG00000019784	zgc:110045	73	89.623	Esox_lucius
ENSHBUG00000012495	zgc:110045	99	76.471	ENSFCAG00000014812	PCBP3	91	76.471	Felis_catus
ENSHBUG00000012495	zgc:110045	99	76.471	ENSFDAG00000009117	PCBP3	91	76.471	Fukomys_damarensis
ENSHBUG00000012495	zgc:110045	94	93.035	ENSFHEG00000018838	-	92	93.035	Fundulus_heteroclitus
ENSHBUG00000012495	zgc:110045	96	92.114	ENSGMOG00000005953	zgc:110045	96	92.114	Gadus_morhua
ENSHBUG00000012495	zgc:110045	94	96.330	ENSGAFG00000017864	zgc:110045	96	96.330	Gambusia_affinis
ENSHBUG00000012495	zgc:110045	99	95.988	ENSGACG00000003044	zgc:110045	100	95.988	Gasterosteus_aculeatus
ENSHBUG00000012495	zgc:110045	99	76.780	ENSGGOG00000003683	PCBP3	91	76.780	Gorilla_gorilla
ENSHBUG00000012495	zgc:110045	99	72.303	ENSHGLG00000018620	PCBP3	91	72.303	Heterocephalus_glaber_female
ENSHBUG00000012495	zgc:110045	99	72.303	ENSHGLG00100013590	PCBP3	91	72.303	Heterocephalus_glaber_male
ENSHBUG00000012495	zgc:110045	100	77.650	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSHBUG00000012495	zgc:110045	79	66.540	ENSIPUG00000003932	zgc:110045	97	66.540	Ictalurus_punctatus
ENSHBUG00000012495	zgc:110045	99	72.303	ENSSTOG00000007178	PCBP3	91	72.303	Ictidomys_tridecemlineatus
ENSHBUG00000012495	zgc:110045	99	72.595	ENSJJAG00000021192	Pcbp3	91	72.595	Jaculus_jaculus
ENSHBUG00000012495	zgc:110045	92	95.897	ENSKMAG00000016179	-	95	95.897	Kryptolebias_marmoratus
ENSHBUG00000012495	zgc:110045	100	88.630	ENSLBEG00000023074	zgc:110045	100	88.630	Labrus_bergylta
ENSHBUG00000012495	zgc:110045	99	70.845	ENSLAFG00000020835	PCBP3	100	74.590	Loxodonta_africana
ENSHBUG00000012495	zgc:110045	99	76.780	ENSMFAG00000034574	PCBP3	91	76.780	Macaca_fascicularis
ENSHBUG00000012495	zgc:110045	99	76.780	ENSMMUG00000003825	PCBP3	99	71.605	Macaca_mulatta
ENSHBUG00000012495	zgc:110045	99	76.780	ENSMNEG00000035551	PCBP3	99	76.780	Macaca_nemestrina
ENSHBUG00000012495	zgc:110045	99	76.780	ENSMLEG00000038785	PCBP3	99	69.277	Mandrillus_leucophaeus
ENSHBUG00000012495	zgc:110045	97	97.143	ENSMAMG00000014389	zgc:110045	100	97.143	Mastacembelus_armatus
ENSHBUG00000012495	zgc:110045	97	99.684	ENSMZEG00005011785	zgc:110045	73	99.684	Maylandia_zebra
ENSHBUG00000012495	zgc:110045	98	72.861	ENSMAUG00000007036	Pcbp3	90	72.861	Mesocricetus_auratus
ENSHBUG00000012495	zgc:110045	99	76.471	ENSMICG00000012679	PCBP3	91	76.471	Microcebus_murinus
ENSHBUG00000012495	zgc:110045	99	72.303	ENSMOCG00000016127	Pcbp3	91	72.303	Microtus_ochrogaster
ENSHBUG00000012495	zgc:110045	62	89.055	ENSMMOG00000008399	zgc:110045	95	89.055	Mola_mola
ENSHBUG00000012495	zgc:110045	61	90.955	ENSMALG00000008763	zgc:110045	96	90.955	Monopterus_albus
ENSHBUG00000012495	zgc:110045	99	72.515	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.799	Mus_caroli
ENSHBUG00000012495	zgc:110045	99	72.515	ENSMUSG00000001120	Pcbp3	99	73.799	Mus_musculus
ENSHBUG00000012495	zgc:110045	99	72.515	MGP_PahariEiJ_G0030889	Pcbp3	99	73.799	Mus_pahari
ENSHBUG00000012495	zgc:110045	99	72.515	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.799	Mus_spretus
ENSHBUG00000012495	zgc:110045	99	72.303	ENSMLUG00000003074	PCBP3	91	72.303	Myotis_lucifugus
ENSHBUG00000012495	zgc:110045	99	72.303	ENSNGAG00000005416	Pcbp3	91	72.303	Nannospalax_galili
ENSHBUG00000012495	zgc:110045	97	99.684	ENSNBRG00000017646	zgc:110045	73	99.684	Neolamprologus_brichardi
ENSHBUG00000012495	zgc:110045	99	76.780	ENSNLEG00000002639	PCBP3	91	76.780	Nomascus_leucogenys
ENSHBUG00000012495	zgc:110045	99	66.022	ENSMEUG00000012960	PCBP3	99	66.022	Notamacropus_eugenii
ENSHBUG00000012495	zgc:110045	99	69.971	ENSODEG00000012873	PCBP3	91	69.971	Octodon_degus
ENSHBUG00000012495	zgc:110045	97	99.367	ENSONIG00000010370	zgc:110045	77	99.367	Oreochromis_niloticus
ENSHBUG00000012495	zgc:110045	73	71.318	ENSOANG00000006265	PCBP3	90	71.318	Ornithorhynchus_anatinus
ENSHBUG00000012495	zgc:110045	97	96.519	ENSORLG00000014385	-	73	96.519	Oryzias_latipes
ENSHBUG00000012495	zgc:110045	97	95.886	ENSORLG00020003139	zgc:110045	100	84.064	Oryzias_latipes_hni
ENSHBUG00000012495	zgc:110045	97	96.203	ENSOMEG00000015459	-	73	96.203	Oryzias_melastigma
ENSHBUG00000012495	zgc:110045	99	70.088	ENSOARG00000012704	PCBP3	91	70.088	Ovis_aries
ENSHBUG00000012495	zgc:110045	99	76.780	ENSPPAG00000021940	PCBP3	91	76.780	Pan_paniscus
ENSHBUG00000012495	zgc:110045	99	76.471	ENSPPRG00000003933	PCBP3	91	76.471	Panthera_pardus
ENSHBUG00000012495	zgc:110045	99	62.883	ENSPTIG00000012038	PCBP3	90	63.467	Panthera_tigris_altaica
ENSHBUG00000012495	zgc:110045	99	56.966	ENSPTRG00000014010	PCBP3	99	51.374	Pan_troglodytes
ENSHBUG00000012495	zgc:110045	99	76.780	ENSPANG00000023631	PCBP3	91	76.780	Papio_anubis
ENSHBUG00000012495	zgc:110045	97	79.439	ENSPMGG00000021588	-	73	79.439	Periophthalmus_magnuspinnatus
ENSHBUG00000012495	zgc:110045	66	58.065	ENSPMGG00000022531	-	96	58.065	Periophthalmus_magnuspinnatus
ENSHBUG00000012495	zgc:110045	99	72.303	ENSPEMG00000000587	Pcbp3	91	72.303	Peromyscus_maniculatus_bairdii
ENSHBUG00000012495	zgc:110045	98	96.226	ENSPFOG00000002348	zgc:110045	98	96.226	Poecilia_formosa
ENSHBUG00000012495	zgc:110045	67	92.202	ENSPLAG00000017488	zgc:110045	96	92.202	Poecilia_latipinna
ENSHBUG00000012495	zgc:110045	94	96.330	ENSPMEG00000012762	zgc:110045	96	96.330	Poecilia_mexicana
ENSHBUG00000012495	zgc:110045	97	96.835	ENSPREG00000001797	zgc:110045	95	97.209	Poecilia_reticulata
ENSHBUG00000012495	zgc:110045	76	69.732	ENSPPYG00000011525	-	94	69.732	Pongo_abelii
ENSHBUG00000012495	zgc:110045	93	58.187	ENSPCAG00000001454	PCBP3	98	58.187	Procavia_capensis
ENSHBUG00000012495	zgc:110045	99	76.471	ENSPCOG00000013797	PCBP3	91	76.471	Propithecus_coquereli
ENSHBUG00000012495	zgc:110045	85	70.563	ENSPVAG00000000832	PCBP3	82	70.996	Pteropus_vampyrus
ENSHBUG00000012495	zgc:110045	94	94.931	ENSPNYG00000004637	zgc:110045	99	94.931	Pundamilia_nyererei
ENSHBUG00000012495	zgc:110045	67	80.184	ENSPNAG00000004501	zgc:110045	97	80.184	Pygocentrus_nattereri
ENSHBUG00000012495	zgc:110045	99	76.780	ENSRROG00000034567	PCBP3	91	76.780	Rhinopithecus_roxellana
ENSHBUG00000012495	zgc:110045	99	76.780	ENSSBOG00000005789	PCBP3	91	76.780	Saimiri_boliviensis_boliviensis
ENSHBUG00000012495	zgc:110045	97	97.785	ENSSMAG00000013541	zgc:110045	91	98.140	Scophthalmus_maximus
ENSHBUG00000012495	zgc:110045	93	98.238	ENSSDUG00000019371	zgc:110045	66	98.238	Seriola_dumerili
ENSHBUG00000012495	zgc:110045	97	98.734	ENSSLDG00000021064	zgc:110045	73	98.734	Seriola_lalandi_dorsalis
ENSHBUG00000012495	zgc:110045	63	62.136	ENSSARG00000007629	-	100	62.136	Sorex_araneus
ENSHBUG00000012495	zgc:110045	100	99.387	ENSSPAG00000000563	zgc:110045	100	99.387	Stegastes_partitus
ENSHBUG00000012495	zgc:110045	99	76.471	ENSSSCG00000023041	PCBP3	91	76.471	Sus_scrofa
ENSHBUG00000012495	zgc:110045	94	93.970	ENSTRUG00000017789	zgc:110045	98	93.970	Takifugu_rubripes
ENSHBUG00000012495	zgc:110045	89	88.421	ENSTNIG00000003546	zgc:110045	94	88.421	Tetraodon_nigroviridis
ENSHBUG00000012495	zgc:110045	72	59.072	ENSTBEG00000011882	-	73	59.072	Tupaia_belangeri
ENSHBUG00000012495	zgc:110045	95	75.874	ENSUAMG00000006491	PCBP3	100	75.874	Ursus_americanus
ENSHBUG00000012495	zgc:110045	99	63.610	ENSUMAG00000025403	PCBP3	91	63.610	Ursus_maritimus
ENSHBUG00000012495	zgc:110045	99	67.761	ENSVVUG00000023862	PCBP3	99	64.162	Vulpes_vulpes
ENSHBUG00000012495	zgc:110045	94	85.714	ENSXCOG00000005968	zgc:110045	96	85.714	Xiphophorus_couchianus
ENSHBUG00000012495	zgc:110045	97	96.835	ENSXMAG00000008030	zgc:110045	73	96.835	Xiphophorus_maculatus