EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012581 (Gene tree)
Gene ID: 102307844
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 24910 bases
Position: chrJH425391.1:813197-838106
Accession: 102307844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000010924	Ribonuc_2-5A	PF06479.12	3.6e-40	1	1
ENSHBUP00000028605	Ribonuc_2-5A	PF06479.12	3.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000017910	-	3234	XM_005925405	ENSHBUP00000028605	1077 (aa)	XP_005925467	-
ENSHBUT00000017946	-	6032	-	ENSHBUP00000010924	1035 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000012581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012581	ern1	87	55.821	ENSHBUG00000019242	ern2	99	54.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012581	ern1	97	91.508	ENSAPOG00000009999	ern1	97	90.652	Acanthochromis_polyacanthus
ENSHBUG00000012581	ern1	99	94.078	ENSACIG00000021716	ern1	99	93.686	Amphilophus_citrinellus
ENSHBUG00000012581	ern1	99	90.750	ENSAOCG00000012309	ern1	99	89.981	Amphiprion_ocellaris
ENSHBUG00000012581	ern1	99	90.263	ENSAPEG00000011263	ern1	98	94.811	Amphiprion_percula
ENSHBUG00000012581	ern1	99	88.450	ENSATEG00000024468	ern1	99	88.214	Anabas_testudineus
ENSHBUG00000012581	ern1	100	99.536	ENSACLG00000027919	ern1	100	99.536	Astatotilapia_calliptera
ENSHBUG00000012581	ern1	92	82.154	ENSAMXG00000000944	ern1	96	82.154	Astyanax_mexicanus
ENSHBUG00000012581	ern1	94	88.790	ENSCSEG00000014500	ern1	97	89.970	Cynoglossus_semilaevis
ENSHBUG00000012581	ern1	95	87.721	ENSCVAG00000002988	ern1	96	87.858	Cyprinodon_variegatus
ENSHBUG00000012581	ern1	89	81.725	ENSDARG00000013997	ern1	99	81.988	Danio_rerio
ENSHBUG00000012581	ern1	88	82.538	ENSELUG00000005957	ern1	93	82.456	Esox_lucius
ENSHBUG00000012581	ern1	94	87.667	ENSFHEG00000005578	ern1	94	88.159	Fundulus_heteroclitus
ENSHBUG00000012581	ern1	88	87.404	ENSGMOG00000011232	ern1	100	87.872	Gadus_morhua
ENSHBUG00000012581	ern1	97	87.019	ENSGAFG00000020231	ern1	95	88.993	Gambusia_affinis
ENSHBUG00000012581	ern1	88	91.347	ENSGACG00000011700	ern1	97	92.021	Gasterosteus_aculeatus
ENSHBUG00000012581	ern1	98	83.947	ENSHCOG00000016199	ern1	99	83.947	Hippocampus_comes
ENSHBUG00000012581	ern1	89	83.983	ENSIPUG00000011083	ern1	93	83.162	Ictalurus_punctatus
ENSHBUG00000012581	ern1	99	86.560	ENSKMAG00000019499	ern1	98	86.560	Kryptolebias_marmoratus
ENSHBUG00000012581	ern1	99	85.940	ENSLBEG00000025907	ern1	99	85.940	Labrus_bergylta
ENSHBUG00000012581	ern1	99	88.577	ENSMAMG00000023439	ern1	99	88.577	Mastacembelus_armatus
ENSHBUG00000012581	ern1	99	99.250	ENSMZEG00005003221	ern1	99	98.514	Maylandia_zebra
ENSHBUG00000012581	ern1	87	92.977	ENSMMOG00000007650	ern1	96	90.871	Mola_mola
ENSHBUG00000012581	ern1	99	86.210	ENSMALG00000017775	ern1	97	85.886	Monopterus_albus
ENSHBUG00000012581	ern1	100	97.957	ENSNBRG00000002179	ern1	100	97.957	Neolamprologus_brichardi
ENSHBUG00000012581	ern1	88	97.146	ENSONIG00000017169	ern1	98	97.146	Oreochromis_niloticus
ENSHBUG00000012581	ern1	97	86.108	ENSORLG00000008940	ern1	97	86.628	Oryzias_latipes
ENSHBUG00000012581	ern1	98	86.445	ENSORLG00020018387	ern1	97	86.445	Oryzias_latipes_hni
ENSHBUG00000012581	ern1	98	86.351	ENSORLG00015007946	ern1	98	86.351	Oryzias_latipes_hsok
ENSHBUG00000012581	ern1	98	86.351	ENSOMEG00000011741	ern1	98	86.351	Oryzias_melastigma
ENSHBUG00000012581	ern1	89	82.703	ENSPKIG00000005593	ern1	98	82.286	Paramormyrops_kingsleyae
ENSHBUG00000012581	ern1	99	84.196	ENSPMGG00000020442	ern1	96	88.641	Periophthalmus_magnuspinnatus
ENSHBUG00000012581	ern1	95	88.900	ENSPFOG00000007378	ern1	94	88.900	Poecilia_formosa
ENSHBUG00000012581	ern1	95	88.900	ENSPLAG00000014780	ern1	96	88.304	Poecilia_latipinna
ENSHBUG00000012581	ern1	95	88.998	ENSPMEG00000016324	ern1	97	87.912	Poecilia_mexicana
ENSHBUG00000012581	ern1	95	88.409	ENSPREG00000006286	ern1	94	88.409	Poecilia_reticulata
ENSHBUG00000012581	ern1	99	99.223	ENSPNYG00000017929	ern1	99	98.700	Pundamilia_nyererei
ENSHBUG00000012581	ern1	95	80.668	ENSPNAG00000029447	ern1	99	79.981	Pygocentrus_nattereri
ENSHBUG00000012581	ern1	99	87.768	ENSSMAG00000015042	ern1	98	87.768	Scophthalmus_maximus
ENSHBUG00000012581	ern1	99	90.270	ENSSDUG00000009098	ern1	99	89.770	Seriola_dumerili
ENSHBUG00000012581	ern1	99	89.788	ENSSLDG00000023254	ern1	99	89.309	Seriola_lalandi_dorsalis
ENSHBUG00000012581	ern1	99	90.104	ENSSPAG00000017539	ern1	99	90.104	Stegastes_partitus
ENSHBUG00000012581	ern1	98	86.377	ENSTRUG00000001041	ern1	98	87.075	Takifugu_rubripes
ENSHBUG00000012581	ern1	88	91.529	ENSTNIG00000017990	ern1	98	92.242	Tetraodon_nigroviridis
ENSHBUG00000012581	ern1	92	90.451	ENSXCOG00000010330	ern1	97	90.964	Xiphophorus_couchianus
ENSHBUG00000012581	ern1	95	88.481	ENSXMAG00000001310	ern1	94	89.042	Xiphophorus_maculatus