EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012594 (Gene tree)
Gene ID: 102294877
Gene Symbol: RAB29
Alias: RAB7L|RAB7L1
Full Name: ras-related protein Rab-7L1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3882 bases
Position: chrJH425475.1:761895-765776
Accession: 102294877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000028665	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000018080	RAB29-201	624	XM_005933229	ENSHBUP00000028665	207 (aa)	XP_005933291	UPI0003BDBC37

Gene Model

Click here to download ENSHBUG00000012594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012594	RAB29	56	30.769	ENSHBUG00000015310	RAP2B	93	32.031
ENSHBUG00000012594	RAB29	82	37.427	ENSHBUG00000017297	rab15	77	37.427
ENSHBUG00000012594	RAB29	98	34.483	ENSHBUG00000022669	rab9a	97	34.483
ENSHBUG00000012594	RAB29	85	35.593	ENSHBUG00000003539	RAB39B	81	35.593
ENSHBUG00000012594	RAB29	85	36.723	ENSHBUG00000013570	-	81	36.723
ENSHBUG00000012594	RAB29	80	33.533	ENSHBUG00000002014	rab5c	73	33.533
ENSHBUG00000012594	RAB29	99	30.806	ENSHBUG00000009333	rab11al	95	30.806
ENSHBUG00000012594	RAB29	88	33.152	ENSHBUG00000023035	rab11a	77	33.152
ENSHBUG00000012594	RAB29	80	33.533	ENSHBUG00000006823	-	73	33.533
ENSHBUG00000012594	RAB29	99	33.971	ENSHBUG00000010304	rab1ab	98	33.971
ENSHBUG00000012594	RAB29	56	35.043	ENSHBUG00000017973	si:ch73-116o1.2	77	33.333
ENSHBUG00000012594	RAB29	82	35.673	ENSHBUG00000000993	rab30	75	35.673
ENSHBUG00000012594	RAB29	82	35.882	ENSHBUG00000002397	-	77	35.882
ENSHBUG00000012594	RAB29	80	34.731	ENSHBUG00000003752	rab5aa	75	34.731
ENSHBUG00000012594	RAB29	81	30.952	ENSHBUG00000001462	RAB17	71	30.952
ENSHBUG00000012594	RAB29	83	30.409	ENSHBUG00000011998	hrasb	86	30.409
ENSHBUG00000012594	RAB29	85	36.000	ENSHBUG00000001595	rab9b	78	36.000
ENSHBUG00000012594	RAB29	99	31.193	ENSHBUG00000014777	rab11bb	95	31.193
ENSHBUG00000012594	RAB29	82	34.911	ENSHBUG00000001518	rab18a	80	34.911
ENSHBUG00000012594	RAB29	81	36.310	ENSHBUG00000009027	-	81	36.047
ENSHBUG00000012594	RAB29	99	44.498	ENSHBUG00000013010	rab32b	92	45.274
ENSHBUG00000012594	RAB29	86	40.223	ENSHBUG00000003728	-	86	40.223
ENSHBUG00000012594	RAB29	85	37.853	ENSHBUG00000001416	rab35b	98	33.981
ENSHBUG00000012594	RAB29	81	35.503	ENSHBUG00000006056	-	76	35.503
ENSHBUG00000012594	RAB29	81	34.911	ENSHBUG00000022562	-	76	34.911
ENSHBUG00000012594	RAB29	83	30.409	ENSHBUG00000013197	kras	86	30.409
ENSHBUG00000012594	RAB29	83	32.948	ENSHBUG00000014338	RAB41	79	32.948
ENSHBUG00000012594	RAB29	87	30.939	ENSHBUG00000009320	rab25b	87	30.899
ENSHBUG00000012594	RAB29	99	30.415	ENSHBUG00000009947	-	95	30.415
ENSHBUG00000012594	RAB29	99	33.645	ENSHBUG00000019164	rab2a	98	33.645
ENSHBUG00000012594	RAB29	81	39.053	ENSHBUG00000008497	rab12	67	39.053
ENSHBUG00000012594	RAB29	71	40.136	ENSHBUG00000007966	rab23	76	40.741
ENSHBUG00000012594	RAB29	86	31.285	ENSHBUG00000003434	rab22a	71	31.285
ENSHBUG00000012594	RAB29	82	38.596	ENSHBUG00000019261	si:dkey-16l2.16	97	35.071
ENSHBUG00000012594	RAB29	98	32.039	ENSHBUG00000010852	RAB7A	97	32.039
ENSHBUG00000012594	RAB29	62	42.188	ENSHBUG00000014023	si:dkey-13a21.4	62	42.188
ENSHBUG00000012594	RAB29	83	36.416	ENSHBUG00000015126	rab42a	63	37.059
ENSHBUG00000012594	RAB29	76	34.177	ENSHBUG00000003230	rab6bb	76	34.177
ENSHBUG00000012594	RAB29	90	36.364	ENSHBUG00000013162	rab33ba	94	36.364
ENSHBUG00000012594	RAB29	82	37.278	ENSHBUG00000003696	rab18b	80	37.278
ENSHBUG00000012594	RAB29	82	35.673	ENSHBUG00000017620	-	78	35.673
ENSHBUG00000012594	RAB29	97	30.693	ENSHBUG00000012905	rab6ba	93	30.542
ENSHBUG00000012594	RAB29	85	39.560	ENSHBUG00000001714	-	73	39.560
ENSHBUG00000012594	RAB29	73	38.961	ENSHBUG00000007827	zgc:101559	64	38.961
ENSHBUG00000012594	RAB29	98	31.034	ENSHBUG00000000890	rab6a	93	31.034
ENSHBUG00000012594	RAB29	85	34.286	ENSHBUG00000009014	-	84	34.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012594	RAB29	100	77.404	ENSATEG00000024739	RAB29	100	77.404	Anabas_testudineus
ENSHBUG00000012594	RAB29	80	99.394	ENSACLG00000008602	RAB29	100	99.394	Astatotilapia_calliptera
ENSHBUG00000012594	RAB29	100	75.481	ENSCVAG00000014038	RAB29	100	75.481	Cyprinodon_variegatus
ENSHBUG00000012594	RAB29	83	56.395	ENSEBUG00000002259	RAB29	83	56.395	Eptatretus_burgeri
ENSHBUG00000012594	RAB29	90	72.043	ENSFHEG00000015993	RAB29	90	72.043	Fundulus_heteroclitus
ENSHBUG00000012594	RAB29	79	76.220	ENSGMOG00000018475	RAB29	99	76.220	Gadus_morhua
ENSHBUG00000012594	RAB29	100	74.396	ENSGAFG00000000629	RAB29	100	74.396	Gambusia_affinis
ENSHBUG00000012594	RAB29	100	75.962	ENSGACG00000010473	RAB29	99	75.962	Gasterosteus_aculeatus
ENSHBUG00000012594	RAB29	95	78.894	ENSKMAG00000017150	-	89	78.894	Kryptolebias_marmoratus
ENSHBUG00000012594	RAB29	99	78.744	ENSLBEG00000006152	-	100	78.744	Labrus_bergylta
ENSHBUG00000012594	RAB29	99	78.744	ENSLBEG00000018812	RAB29	100	78.744	Labrus_bergylta
ENSHBUG00000012594	RAB29	86	56.425	ENSLACG00000002523	RAB29	86	56.425	Latimeria_chalumnae
ENSHBUG00000012594	RAB29	100	77.885	ENSMAMG00000006963	RAB29	100	77.885	Mastacembelus_armatus
ENSHBUG00000012594	RAB29	100	98.551	ENSMZEG00005026799	RAB29	100	98.551	Maylandia_zebra
ENSHBUG00000012594	RAB29	100	79.327	ENSMALG00000018436	RAB29	90	79.327	Monopterus_albus
ENSHBUG00000012594	RAB29	78	98.137	ENSNBRG00000008714	RAB29	71	98.137	Neolamprologus_brichardi
ENSHBUG00000012594	RAB29	100	95.652	ENSONIG00000014892	RAB29	100	95.652	Oreochromis_niloticus
ENSHBUG00000012594	RAB29	100	77.885	ENSORLG00000027892	RAB29	100	77.885	Oryzias_latipes
ENSHBUG00000012594	RAB29	100	75.962	ENSORLG00020005240	RAB29	100	75.962	Oryzias_latipes_hni
ENSHBUG00000012594	RAB29	100	76.923	ENSORLG00015020441	-	100	76.923	Oryzias_latipes_hsok
ENSHBUG00000012594	RAB29	100	77.990	ENSOMEG00000000336	RAB29	100	77.990	Oryzias_melastigma
ENSHBUG00000012594	RAB29	85	75.429	ENSPMGG00000008290	-	100	68.269	Periophthalmus_magnuspinnatus
ENSHBUG00000012594	RAB29	100	70.048	ENSPFOG00000013066	RAB29	99	70.048	Poecilia_formosa
ENSHBUG00000012594	RAB29	99	70.098	ENSPLAG00000002600	RAB29	95	70.098	Poecilia_latipinna
ENSHBUG00000012594	RAB29	100	71.014	ENSPMEG00000021807	RAB29	100	71.014	Poecilia_mexicana
ENSHBUG00000012594	RAB29	100	71.981	ENSPREG00000020276	RAB29	100	71.981	Poecilia_reticulata
ENSHBUG00000012594	RAB29	100	98.551	ENSPNYG00000015355	RAB29	100	98.551	Pundamilia_nyererei
ENSHBUG00000012594	RAB29	100	76.442	ENSSDUG00000006543	RAB29	100	76.442	Seriola_dumerili
ENSHBUG00000012594	RAB29	83	56.140	ENSSPUG00000015007	RAB29	84	56.140	Sphenodon_punctatus
ENSHBUG00000012594	RAB29	100	75.000	ENSSPAG00000002062	RAB29	100	75.000	Stegastes_partitus
ENSHBUG00000012594	RAB29	100	74.038	ENSXCOG00000016370	RAB29	100	74.038	Xiphophorus_couchianus
ENSHBUG00000012594	RAB29	100	74.396	ENSXMAG00000029823	RAB29	100	74.396	Xiphophorus_maculatus