EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000012719 (Gene tree)
Gene ID: 102292485
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5163 bases
Position: chrJH425442.1:25572-30734
Accession: 102292485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011100	Mago-bind	PF09282.10	4.6e-13	1	1
ENSHBUP00000011109	Mago-bind	PF09282.10	5.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000018202	-	3451	XM_005930612	ENSHBUP00000011109	211 (aa)	XP_005930674	UPI0003BCFDDD
ENSHBUT00000018191	-	573	-	ENSHBUP00000011100	190 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000012719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012719	pym1	94	60.294	ENSG00000170473	PYM1	94	60.294	Homo_sapiens
ENSHBUG00000012719	pym1	100	85.849	ENSAPOG00000023045	pym1	94	84.000	Acanthochromis_polyacanthus
ENSHBUG00000012719	pym1	91	58.163	ENSAMEG00000003091	PYM1	91	56.633	Ailuropoda_melanoleuca
ENSHBUG00000012719	pym1	100	92.991	ENSACIG00000012769	pym1	100	92.523	Amphilophus_citrinellus
ENSHBUG00000012719	pym1	100	87.678	ENSAOCG00000021358	pym1	100	87.678	Amphiprion_ocellaris
ENSHBUG00000012719	pym1	100	87.678	ENSAPEG00000022679	pym1	100	87.678	Amphiprion_percula
ENSHBUG00000012719	pym1	100	85.308	ENSATEG00000024022	pym1	94	86.432	Anabas_testudineus
ENSHBUG00000012719	pym1	94	62.679	ENSACAG00000005714	PYM1	94	61.722	Anolis_carolinensis
ENSHBUG00000012719	pym1	94	60.294	ENSANAG00000036967	PYM1	94	60.294	Aotus_nancymaae
ENSHBUG00000012719	pym1	98	71.574	ENSAMXG00000007650	pym1	94	68.449	Astyanax_mexicanus
ENSHBUG00000012719	pym1	94	61.275	ENSBTAG00000031146	PYM1	94	61.275	Bos_taurus
ENSHBUG00000012719	pym1	94	60.294	ENSCJAG00000041077	PYM1	94	59.314	Callithrix_jacchus
ENSHBUG00000012719	pym1	94	61.275	ENSCAFG00000000076	PYM1	94	60.294	Canis_familiaris
ENSHBUG00000012719	pym1	94	61.275	ENSCAFG00020026099	PYM1	94	60.294	Canis_lupus_dingo
ENSHBUG00000012719	pym1	94	61.576	ENSCHIG00000026207	PYM1	94	60.099	Capra_hircus
ENSHBUG00000012719	pym1	94	58.824	ENSTSYG00000000787	PYM1	94	58.824	Carlito_syrichta
ENSHBUG00000012719	pym1	89	58.549	ENSCAPG00000010374	PYM1	94	55.155	Cavia_aperea
ENSHBUG00000012719	pym1	94	60.000	ENSCPOG00000031546	PYM1	94	56.796	Cavia_porcellus
ENSHBUG00000012719	pym1	94	60.294	ENSCCAG00000026187	PYM1	94	60.294	Cebus_capucinus
ENSHBUG00000012719	pym1	94	60.784	ENSCATG00000018801	PYM1	94	59.804	Cercocebus_atys
ENSHBUG00000012719	pym1	94	60.099	ENSCLAG00000007964	PYM1	94	58.128	Chinchilla_lanigera
ENSHBUG00000012719	pym1	90	59.585	ENSCSAG00000005291	PYM1	92	58.549	Chlorocebus_sabaeus
ENSHBUG00000012719	pym1	98	42.105	ENSCING00000006448	-	92	42.786	Ciona_intestinalis
ENSHBUG00000012719	pym1	98	40.000	ENSCSAVG00000009805	-	87	40.102	Ciona_savignyi
ENSHBUG00000012719	pym1	94	60.784	ENSCANG00000020338	-	94	59.804	Colobus_angolensis_palliatus
ENSHBUG00000012719	pym1	93	56.716	ENSCANG00000019757	-	85	57.711	Colobus_angolensis_palliatus
ENSHBUG00000012719	pym1	88	52.432	ENSCGRG00001004231	-	90	52.062	Cricetulus_griseus_chok1gshd
ENSHBUG00000012719	pym1	94	58.049	ENSCGRG00001018051	-	94	56.731	Cricetulus_griseus_chok1gshd
ENSHBUG00000012719	pym1	88	52.432	ENSCGRG00000018933	-	90	52.062	Cricetulus_griseus_crigri
ENSHBUG00000012719	pym1	94	58.049	ENSCGRG00000012495	-	94	56.731	Cricetulus_griseus_crigri
ENSHBUG00000012719	pym1	100	76.526	ENSCSEG00000021531	pym1	100	78.155	Cynoglossus_semilaevis
ENSHBUG00000012719	pym1	99	80.769	ENSCVAG00000017360	pym1	88	80.769	Cyprinodon_variegatus
ENSHBUG00000012719	pym1	100	58.824	ENSDARG00000046024	pym1	94	56.633	Danio_rerio
ENSHBUG00000012719	pym1	94	58.824	ENSDNOG00000048414	PYM1	85	58.209	Dasypus_novemcinctus
ENSHBUG00000012719	pym1	94	60.294	ENSDORG00000029448	Pym1	94	58.621	Dipodomys_ordii
ENSHBUG00000012719	pym1	90	54.688	ENSETEG00000004461	-	94	54.167	Echinops_telfairi
ENSHBUG00000012719	pym1	89	58.115	ENSEASG00005002271	PYM1	81	57.068	Equus_asinus_asinus
ENSHBUG00000012719	pym1	94	61.084	ENSECAG00000011870	PYM1	94	59.606	Equus_caballus
ENSHBUG00000012719	pym1	100	69.668	ENSELUG00000024250	pym1	94	67.839	Esox_lucius
ENSHBUG00000012719	pym1	94	60.294	ENSFCAG00000013967	PYM1	94	59.314	Felis_catus
ENSHBUG00000012719	pym1	94	61.765	ENSFDAG00000006314	PYM1	94	60.784	Fukomys_damarensis
ENSHBUG00000012719	pym1	94	82.178	ENSFHEG00000005884	pym1	100	81.776	Fundulus_heteroclitus
ENSHBUG00000012719	pym1	94	64.646	ENSGMOG00000007239	pym1	93	65.285	Gadus_morhua
ENSHBUG00000012719	pym1	94	64.851	ENSGALG00000046169	PYM1	94	64.851	Gallus_gallus
ENSHBUG00000012719	pym1	100	79.630	ENSGAFG00000003280	pym1	93	78.713	Gambusia_affinis
ENSHBUG00000012719	pym1	100	75.355	ENSGACG00000010703	pym1	94	75.377	Gasterosteus_aculeatus
ENSHBUG00000012719	pym1	90	58.883	ENSGAGG00000001973	PYM1	84	57.000	Gopherus_agassizii
ENSHBUG00000012719	pym1	94	59.804	ENSGGOG00000043246	PYM1	94	59.804	Gorilla_gorilla
ENSHBUG00000012719	pym1	94	60.294	ENSHGLG00000017155	PYM1	93	59.701	Heterocephalus_glaber_female
ENSHBUG00000012719	pym1	94	60.294	ENSHGLG00100015341	PYM1	93	59.701	Heterocephalus_glaber_male
ENSHBUG00000012719	pym1	100	72.683	ENSHCOG00000007987	pym1	81	73.438	Hippocampus_comes
ENSHBUG00000012719	pym1	99	70.283	ENSIPUG00000005975	wibga	94	69.652	Ictalurus_punctatus
ENSHBUG00000012719	pym1	94	60.194	ENSSTOG00000014206	PYM1	94	57.767	Ictidomys_tridecemlineatus
ENSHBUG00000012719	pym1	94	58.000	ENSJJAG00000013338	Pym1	94	56.500	Jaculus_jaculus
ENSHBUG00000012719	pym1	100	82.805	ENSKMAG00000006351	pym1	95	82.775	Kryptolebias_marmoratus
ENSHBUG00000012719	pym1	100	79.147	ENSLBEG00000015707	pym1	100	77.251	Labrus_bergylta
ENSHBUG00000012719	pym1	90	63.000	ENSLACG00000014398	PYM1	89	63.000	Latimeria_chalumnae
ENSHBUG00000012719	pym1	94	61.275	ENSLAFG00000002369	PYM1	94	60.294	Loxodonta_africana
ENSHBUG00000012719	pym1	94	60.784	ENSMFAG00000003048	PYM1	94	59.804	Macaca_fascicularis
ENSHBUG00000012719	pym1	94	60.784	ENSMMUG00000011002	PYM1	94	59.804	Macaca_mulatta
ENSHBUG00000012719	pym1	94	60.784	ENSMNEG00000034677	PYM1	94	59.804	Macaca_nemestrina
ENSHBUG00000012719	pym1	94	60.784	ENSMLEG00000007971	PYM1	94	59.804	Mandrillus_leucophaeus
ENSHBUG00000012719	pym1	100	83.945	ENSMAMG00000001588	pym1	94	84.951	Mastacembelus_armatus
ENSHBUG00000012719	pym1	100	99.526	ENSMZEG00005026458	pym1	100	99.526	Maylandia_zebra
ENSHBUG00000012719	pym1	94	58.333	ENSMAUG00000007318	Pym1	94	58.824	Mesocricetus_auratus
ENSHBUG00000012719	pym1	94	59.804	ENSMICG00000032962	PYM1	94	58.824	Microcebus_murinus
ENSHBUG00000012719	pym1	94	57.143	ENSMOCG00000010208	Pym1	94	56.585	Microtus_ochrogaster
ENSHBUG00000012719	pym1	100	77.720	ENSMMOG00000009301	pym1	100	70.142	Mola_mola
ENSHBUG00000012719	pym1	100	82.629	ENSMALG00000013496	pym1	100	83.099	Monopterus_albus
ENSHBUG00000012719	pym1	93	59.500	MGP_CAROLIEiJ_G0015953	Pym1	93	58.000	Mus_caroli
ENSHBUG00000012719	pym1	94	57.635	ENSMUSG00000064030	Pym1	93	57.000	Mus_musculus
ENSHBUG00000012719	pym1	94	60.302	MGP_PahariEiJ_G0031131	Pym1	93	60.302	Mus_pahari
ENSHBUG00000012719	pym1	94	57.635	MGP_SPRETEiJ_G0016778	Pym1	93	57.000	Mus_spretus
ENSHBUG00000012719	pym1	94	60.294	ENSMPUG00000000931	PYM1	94	59.314	Mustela_putorius_furo
ENSHBUG00000012719	pym1	94	56.650	ENSMLUG00000003586	PYM1	93	57.500	Myotis_lucifugus
ENSHBUG00000012719	pym1	90	57.216	ENSNGAG00000019207	Pym1	88	56.186	Nannospalax_galili
ENSHBUG00000012719	pym1	100	99.526	ENSNBRG00000006951	pym1	100	99.526	Neolamprologus_brichardi
ENSHBUG00000012719	pym1	94	60.294	ENSNLEG00000017588	PYM1	94	60.294	Nomascus_leucogenys
ENSHBUG00000012719	pym1	88	56.614	ENSMEUG00000001017	PYM1	92	55.556	Notamacropus_eugenii
ENSHBUG00000012719	pym1	92	56.061	ENSOPRG00000007797	PYM1	91	55.276	Ochotona_princeps
ENSHBUG00000012719	pym1	94	60.294	ENSODEG00000004289	PYM1	94	59.314	Octodon_degus
ENSHBUG00000012719	pym1	100	96.729	ENSONIG00000016740	pym1	100	96.729	Oreochromis_niloticus
ENSHBUG00000012719	pym1	90	58.549	ENSOCUG00000025969	PYM1	81	57.513	Oryctolagus_cuniculus
ENSHBUG00000012719	pym1	100	78.199	ENSORLG00000030592	pym1	100	76.777	Oryzias_latipes
ENSHBUG00000012719	pym1	100	76.887	ENSORLG00020011264	pym1	94	76.500	Oryzias_latipes_hni
ENSHBUG00000012719	pym1	100	78.673	ENSORLG00015005287	pym1	100	77.725	Oryzias_latipes_hsok
ENSHBUG00000012719	pym1	100	79.070	ENSOMEG00000022250	pym1	100	79.535	Oryzias_melastigma
ENSHBUG00000012719	pym1	90	59.585	ENSOGAG00000007038	PYM1	88	59.585	Otolemur_garnettii
ENSHBUG00000012719	pym1	94	61.576	ENSOARG00000010856	PYM1	94	60.099	Ovis_aries
ENSHBUG00000012719	pym1	94	60.294	ENSPPAG00000043630	PYM1	94	60.294	Pan_paniscus
ENSHBUG00000012719	pym1	94	61.650	ENSPPRG00000013243	PYM1	94	59.314	Panthera_pardus
ENSHBUG00000012719	pym1	94	61.165	ENSPTIG00000017380	PYM1	94	58.824	Panthera_tigris_altaica
ENSHBUG00000012719	pym1	94	60.294	ENSPTRG00000005067	PYM1	94	60.294	Pan_troglodytes
ENSHBUG00000012719	pym1	94	61.275	ENSPANG00000009562	PYM1	94	60.294	Papio_anubis
ENSHBUG00000012719	pym1	99	69.231	ENSPKIG00000006301	pym1	94	68.095	Paramormyrops_kingsleyae
ENSHBUG00000012719	pym1	94	55.072	ENSPSIG00000003043	PYM1	94	55.981	Pelodiscus_sinensis
ENSHBUG00000012719	pym1	99	73.232	ENSPMGG00000023161	pym1	94	72.727	Periophthalmus_magnuspinnatus
ENSHBUG00000012719	pym1	94	57.635	ENSPEMG00000009372	Pym1	94	58.824	Peromyscus_maniculatus_bairdii
ENSHBUG00000012719	pym1	88	56.614	ENSPCIG00000024658	PYM1	87	55.208	Phascolarctos_cinereus
ENSHBUG00000012719	pym1	100	82.075	ENSPFOG00000008193	pym1	100	81.604	Poecilia_formosa
ENSHBUG00000012719	pym1	100	81.776	ENSPLAG00000009228	pym1	93	82.000	Poecilia_latipinna
ENSHBUG00000012719	pym1	100	81.776	ENSPMEG00000001505	pym1	100	81.308	Poecilia_mexicana
ENSHBUG00000012719	pym1	91	57.949	ENSPPYG00000004635	PYM1	92	56.995	Pongo_abelii
ENSHBUG00000012719	pym1	94	59.804	ENSPCOG00000019706	PYM1	94	58.333	Propithecus_coquereli
ENSHBUG00000012719	pym1	91	60.000	ENSPVAG00000011437	PYM1	93	60.000	Pteropus_vampyrus
ENSHBUG00000012719	pym1	100	98.947	ENSPNYG00000012871	pym1	100	98.947	Pundamilia_nyererei
ENSHBUG00000012719	pym1	99	64.486	ENSPNAG00000018833	pym1	94	67.317	Pygocentrus_nattereri
ENSHBUG00000012719	pym1	94	57.711	ENSRNOG00000058130	Pym1	91	58.586	Rattus_norvegicus
ENSHBUG00000012719	pym1	80	50.296	ENSRNOG00000049415	AABR07055413.1	51	61.538	Rattus_norvegicus
ENSHBUG00000012719	pym1	94	56.863	ENSRBIG00000033362	PYM1	94	53.202	Rhinopithecus_bieti
ENSHBUG00000012719	pym1	94	60.784	ENSRROG00000043620	PYM1	94	59.804	Rhinopithecus_roxellana
ENSHBUG00000012719	pym1	94	60.294	ENSSBOG00000029393	PYM1	94	60.294	Saimiri_boliviensis_boliviensis
ENSHBUG00000012719	pym1	93	59.500	ENSSHAG00000008280	PYM1	93	57.500	Sarcophilus_harrisii
ENSHBUG00000012719	pym1	92	68.254	ENSSFOG00015021475	pym1	100	67.150	Scleropages_formosus
ENSHBUG00000012719	pym1	100	79.147	ENSSMAG00000020912	pym1	94	79.899	Scophthalmus_maximus
ENSHBUG00000012719	pym1	100	86.449	ENSSDUG00000001807	pym1	94	87.129	Seriola_dumerili
ENSHBUG00000012719	pym1	100	85.648	ENSSLDG00000013730	pym1	94	85.784	Seriola_lalandi_dorsalis
ENSHBUG00000012719	pym1	90	58.974	ENSSARG00000009569	PYM1	94	57.292	Sorex_araneus
ENSHBUG00000012719	pym1	91	57.868	ENSSPUG00000015059	PYM1	91	55.208	Sphenodon_punctatus
ENSHBUG00000012719	pym1	100	86.977	ENSSPAG00000020100	pym1	94	88.177	Stegastes_partitus
ENSHBUG00000012719	pym1	94	60.784	ENSSSCG00000040825	PYM1	94	60.591	Sus_scrofa
ENSHBUG00000012719	pym1	99	78.571	ENSTRUG00000021367	pym1	94	78.680	Takifugu_rubripes
ENSHBUG00000012719	pym1	100	71.642	ENSTNIG00000012534	pym1	93	79.144	Tetraodon_nigroviridis
ENSHBUG00000012719	pym1	88	57.368	ENSTBEG00000004208	PYM1	92	55.789	Tupaia_belangeri
ENSHBUG00000012719	pym1	91	59.278	ENSTTRG00000014971	PYM1	92	60.825	Tursiops_truncatus
ENSHBUG00000012719	pym1	94	59.606	ENSUAMG00000014521	PYM1	94	58.128	Ursus_americanus
ENSHBUG00000012719	pym1	89	58.421	ENSUMAG00000016241	PYM1	80	56.915	Ursus_maritimus
ENSHBUG00000012719	pym1	94	60.784	ENSVVUG00000022749	PYM1	94	59.804	Vulpes_vulpes
ENSHBUG00000012719	pym1	94	65.803	ENSXETG00000021850	pym1	94	64.322	Xenopus_tropicalis
ENSHBUG00000012719	pym1	100	80.841	ENSXMAG00000011649	pym1	93	81.000	Xiphophorus_maculatus