EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000012758 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 147293 bases
Position: chrJH425487.1:3-147295
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	1	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	2	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	3	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	4	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	5	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	6	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	7	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	8	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	9	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	10	11
ENSHBUP00000011140	zf-C2H2	PF00096.26	5.8e-57	11	11
ENSHBUP00000011140	zf-met	PF12874.7	7.5e-18	1	2
ENSHBUP00000011140	zf-met	PF12874.7	7.5e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000018228	-	1224	-	ENSHBUP00000011140	408 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000012758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000012758	-	88	51.883	ENSHBUG00000002530	-	56	51.883
ENSHBUG00000012758	-	90	53.462	ENSHBUG00000002889	-	56	53.462
ENSHBUG00000012758	-	92	49.485	ENSHBUG00000002881	-	50	49.485
ENSHBUG00000012758	-	100	43.182	ENSHBUG00000009837	znf236	78	43.182
ENSHBUG00000012758	-	85	39.604	ENSHBUG00000005726	-	71	34.694
ENSHBUG00000012758	-	85	44.379	ENSHBUG00000007389	gfi1aa	51	44.379
ENSHBUG00000012758	-	92	42.535	ENSHBUG00000002961	-	98	42.535
ENSHBUG00000012758	-	89	55.959	ENSHBUG00000012565	-	97	55.959
ENSHBUG00000012758	-	89	43.277	ENSHBUG00000013467	-	57	42.759
ENSHBUG00000012758	-	89	47.664	ENSHBUG00000013292	-	65	47.664
ENSHBUG00000012758	-	92	39.895	ENSHBUG00000013264	-	92	39.895
ENSHBUG00000012758	-	90	33.429	ENSHBUG00000017542	znf526	91	34.545
ENSHBUG00000012758	-	88	33.654	ENSHBUG00000009720	-	62	34.264
ENSHBUG00000012758	-	90	44.984	ENSHBUG00000006863	-	92	44.984
ENSHBUG00000012758	-	99	54.726	ENSHBUG00000020071	-	71	52.764
ENSHBUG00000012758	-	90	41.061	ENSHBUG00000003449	-	86	41.061
ENSHBUG00000012758	-	90	43.491	ENSHBUG00000006250	-	85	43.491
ENSHBUG00000012758	-	98	46.018	ENSHBUG00000022021	-	53	46.018
ENSHBUG00000012758	-	90	49.515	ENSHBUG00000017251	-	98	49.515
ENSHBUG00000012758	-	98	48.108	ENSHBUG00000013542	-	73	48.108
ENSHBUG00000012758	-	99	48.416	ENSHBUG00000012007	-	88	58.197
ENSHBUG00000012758	-	92	36.927	ENSHBUG00000005848	-	93	38.043
ENSHBUG00000012758	-	87	44.248	ENSHBUG00000000731	-	52	44.248
ENSHBUG00000012758	-	99	54.945	ENSHBUG00000021028	-	99	50.000
ENSHBUG00000012758	-	90	46.605	ENSHBUG00000014725	-	87	46.605
ENSHBUG00000012758	-	91	44.720	ENSHBUG00000016546	-	72	44.720
ENSHBUG00000012758	-	88	53.012	ENSHBUG00000022073	-	58	50.000
ENSHBUG00000012758	-	87	50.769	ENSHBUG00000011944	-	54	50.769
ENSHBUG00000012758	-	98	55.505	ENSHBUG00000004718	-	97	54.046
ENSHBUG00000012758	-	88	43.017	ENSHBUG00000016334	-	50	43.017
ENSHBUG00000012758	-	90	48.980	ENSHBUG00000009274	-	94	48.980
ENSHBUG00000012758	-	99	52.414	ENSHBUG00000017372	-	99	48.673
ENSHBUG00000012758	-	99	36.744	ENSHBUG00000004217	-	70	41.808
ENSHBUG00000012758	-	95	35.393	ENSHBUG00000015404	-	75	37.354
ENSHBUG00000012758	-	94	47.934	ENSHBUG00000003057	-	93	44.904
ENSHBUG00000012758	-	99	53.659	ENSHBUG00000000146	-	93	53.659
ENSHBUG00000012758	-	88	38.974	ENSHBUG00000014494	-	74	38.974
ENSHBUG00000012758	-	86	52.071	ENSHBUG00000017924	-	50	52.071
ENSHBUG00000012758	-	94	59.504	ENSHBUG00000011194	-	99	59.504
ENSHBUG00000012758	-	99	51.493	ENSHBUG00000015166	-	96	53.247
ENSHBUG00000012758	-	99	50.270	ENSHBUG00000003165	-	84	50.270
ENSHBUG00000012758	-	91	37.097	ENSHBUG00000004840	znf646	88	33.108
ENSHBUG00000012758	-	96	66.667	ENSHBUG00000021906	-	100	66.667
ENSHBUG00000012758	-	91	45.778	ENSHBUG00000016384	-	84	45.778
ENSHBUG00000012758	-	99	39.098	ENSHBUG00000016621	scrt1b	81	39.098
ENSHBUG00000012758	-	88	45.946	ENSHBUG00000004077	-	94	46.729
ENSHBUG00000012758	-	86	57.895	ENSHBUG00000015942	-	96	52.500
ENSHBUG00000012758	-	89	50.211	ENSHBUG00000002393	-	54	50.211
ENSHBUG00000012758	-	90	51.770	ENSHBUG00000015226	-	57	51.770
ENSHBUG00000012758	-	86	37.383	ENSHBUG00000012492	scrt2	51	37.383
ENSHBUG00000012758	-	88	58.850	ENSHBUG00000021003	-	97	55.918
ENSHBUG00000012758	-	99	56.338	ENSHBUG00000012984	-	93	56.338
ENSHBUG00000012758	-	94	60.577	ENSHBUG00000021970	-	95	60.577
ENSHBUG00000012758	-	93	43.723	ENSHBUG00000009319	znf384l	52	40.693
ENSHBUG00000012758	-	99	53.503	ENSHBUG00000007188	-	71	50.388
ENSHBUG00000012758	-	91	35.676	ENSHBUG00000023375	prdm5	70	35.676
ENSHBUG00000012758	-	90	55.000	ENSHBUG00000000099	-	91	55.000
ENSHBUG00000012758	-	90	50.820	ENSHBUG00000019800	-	90	49.533
ENSHBUG00000012758	-	89	60.435	ENSHBUG00000006984	-	98	60.435
ENSHBUG00000012758	-	90	65.217	ENSHBUG00000012215	-	93	65.217
ENSHBUG00000012758	-	91	52.564	ENSHBUG00000003529	-	94	52.564
ENSHBUG00000012758	-	96	48.276	ENSHBUG00000022063	-	83	47.087
ENSHBUG00000012758	-	99	52.198	ENSHBUG00000015803	-	99	45.016
ENSHBUG00000012758	-	99	44.444	ENSHBUG00000005451	gfi1b	83	44.444
ENSHBUG00000012758	-	88	55.026	ENSHBUG00000013194	-	85	52.632
ENSHBUG00000012758	-	88	44.628	ENSHBUG00000016927	-	59	40.333
ENSHBUG00000012758	-	88	48.515	ENSHBUG00000019377	-	61	50.000
ENSHBUG00000012758	-	92	45.245	ENSHBUG00000015719	-	96	45.245
ENSHBUG00000012758	-	93	50.649	ENSHBUG00000000636	-	58	50.649
ENSHBUG00000012758	-	87	31.534	ENSHBUG00000018577	PRDM15	54	32.967
ENSHBUG00000012758	-	87	40.299	ENSHBUG00000007764	snai2	63	40.299
ENSHBUG00000012758	-	88	52.727	ENSHBUG00000002533	-	54	52.727
ENSHBUG00000012758	-	93	50.888	ENSHBUG00000002526	-	69	53.425
ENSHBUG00000012758	-	88	48.117	ENSHBUG00000013518	-	84	46.025
ENSHBUG00000012758	-	88	38.462	ENSHBUG00000009815	znf319b	82	34.906
ENSHBUG00000012758	-	96	48.085	ENSHBUG00000002841	-	91	48.085
ENSHBUG00000012758	-	99	48.756	ENSHBUG00000001075	-	99	45.498
ENSHBUG00000012758	-	91	51.064	ENSHBUG00000020544	-	96	51.064
ENSHBUG00000012758	-	100	56.589	ENSHBUG00000006977	-	72	56.589
ENSHBUG00000012758	-	89	47.778	ENSHBUG00000007316	-	68	47.778
ENSHBUG00000012758	-	99	51.397	ENSHBUG00000009941	-	81	51.397
ENSHBUG00000012758	-	89	41.667	ENSHBUG00000006656	-	63	41.667
ENSHBUG00000012758	-	99	66.667	ENSHBUG00000017843	-	65	66.667
ENSHBUG00000012758	-	90	42.273	ENSHBUG00000023595	znf652	61	36.441
ENSHBUG00000012758	-	98	40.756	ENSHBUG00000012432	-	84	40.756
ENSHBUG00000012758	-	88	41.975	ENSHBUG00000002320	-	62	41.555
ENSHBUG00000012758	-	94	40.496	ENSHBUG00000013296	-	97	40.496
ENSHBUG00000012758	-	88	37.826	ENSHBUG00000017445	zbtb41	64	37.826
ENSHBUG00000012758	-	87	42.647	ENSHBUG00000008502	-	82	41.611
ENSHBUG00000012758	-	87	43.590	ENSHBUG00000006238	-	95	42.735
ENSHBUG00000012758	-	99	66.667	ENSHBUG00000007068	-	78	66.667
ENSHBUG00000012758	-	90	35.802	ENSHBUG00000019090	ZNF319	94	36.695
ENSHBUG00000012758	-	88	47.586	ENSHBUG00000023209	-	90	47.586
ENSHBUG00000012758	-	88	47.183	ENSHBUG00000013490	-	75	47.157
ENSHBUG00000012758	-	89	42.654	ENSHBUG00000002878	-	59	43.725
ENSHBUG00000012758	-	99	55.122	ENSHBUG00000002541	-	91	55.122
ENSHBUG00000012758	-	88	42.920	ENSHBUG00000015393	-	75	43.111
ENSHBUG00000012758	-	90	32.857	ENSHBUG00000012828	znf341	58	33.880
ENSHBUG00000012758	-	90	45.907	ENSHBUG00000000820	-	96	45.907
ENSHBUG00000012758	-	94	45.098	ENSHBUG00000005809	-	99	45.251
ENSHBUG00000012758	-	100	55.022	ENSHBUG00000018916	-	83	51.852
ENSHBUG00000012758	-	88	59.055	ENSHBUG00000017864	-	88	59.055
ENSHBUG00000012758	-	96	58.115	ENSHBUG00000017869	-	100	58.115
ENSHBUG00000012758	-	99	56.522	ENSHBUG00000012230	-	85	54.878
ENSHBUG00000012758	-	90	44.505	ENSHBUG00000020527	-	93	44.505
ENSHBUG00000012758	-	100	47.418	ENSHBUG00000009953	-	86	47.418
ENSHBUG00000012758	-	89	46.245	ENSHBUG00000006662	-	86	45.149
ENSHBUG00000012758	-	99	58.824	ENSHBUG00000011725	-	88	55.702
ENSHBUG00000012758	-	98	41.223	ENSHBUG00000002307	-	68	47.525
ENSHBUG00000012758	-	91	40.244	ENSHBUG00000018885	-	58	40.244
ENSHBUG00000012758	-	99	49.701	ENSHBUG00000013065	-	84	49.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012758	-	99	58.650	ENSACIG00000017647	-	97	54.706	Amphilophus_citrinellus
ENSHBUG00000012758	-	99	52.234	ENSAOCG00000003277	-	81	61.364	Amphiprion_ocellaris
ENSHBUG00000012758	-	91	41.828	ENSAPEG00000016601	-	88	41.828	Amphiprion_percula
ENSHBUG00000012758	-	99	54.726	ENSACLG00000005615	-	71	52.764	Astatotilapia_calliptera
ENSHBUG00000012758	-	91	45.185	ENSACLG00000015989	-	93	40.867	Astatotilapia_calliptera
ENSHBUG00000012758	-	88	44.262	ENSCSAVG00000002179	-	99	46.383	Ciona_savignyi
ENSHBUG00000012758	-	88	45.128	ENSCGRG00001004047	-	71	45.128	Cricetulus_griseus_chok1gshd
ENSHBUG00000012758	-	90	48.058	ENSCSEG00000001771	-	62	48.058	Cynoglossus_semilaevis
ENSHBUG00000012758	-	99	49.020	ENSEBUG00000011244	-	94	49.020	Eptatretus_burgeri
ENSHBUG00000012758	-	90	44.886	ENSEBUG00000002589	-	84	44.637	Eptatretus_burgeri
ENSHBUG00000012758	-	91	45.902	ENSEBUG00000002537	-	87	45.902	Eptatretus_burgeri
ENSHBUG00000012758	-	91	44.720	ENSMZEG00005027844	-	72	44.720	Maylandia_zebra
ENSHBUG00000012758	-	91	46.193	ENSMZEG00005020731	-	85	46.193	Maylandia_zebra
ENSHBUG00000012758	-	88	50.347	MGP_CAROLIEiJ_G0029612	Zfp141	56	50.347	Mus_caroli
ENSHBUG00000012758	-	88	50.809	ENSMUSG00000092416	Zfp141	56	50.694	Mus_musculus
ENSHBUG00000012758	-	88	54.054	MGP_SPRETEiJ_G0030709	-	83	54.054	Mus_spretus
ENSHBUG00000012758	-	99	54.878	ENSNBRG00000023229	-	94	53.982	Neolamprologus_brichardi
ENSHBUG00000012758	-	89	42.577	ENSONIG00000018188	-	100	43.305	Oreochromis_niloticus
ENSHBUG00000012758	-	90	42.090	ENSONIG00000006238	-	99	42.090	Oreochromis_niloticus
ENSHBUG00000012758	-	91	44.848	ENSONIG00000014100	-	90	45.890	Oreochromis_niloticus
ENSHBUG00000012758	-	88	46.237	ENSPFOG00000007708	-	99	45.029	Poecilia_formosa
ENSHBUG00000012758	-	99	48.684	ENSPLAG00000010448	-	68	51.613	Poecilia_latipinna
ENSHBUG00000012758	-	96	43.234	ENSPCAG00000001613	-	83	43.234	Procavia_capensis
ENSHBUG00000012758	-	91	45.918	ENSPNYG00000005671	-	83	45.918	Pundamilia_nyererei
ENSHBUG00000012758	-	88	57.386	ENSPNAG00000015131	-	86	57.386	Pygocentrus_nattereri
ENSHBUG00000012758	-	88	50.857	ENSSFOG00015000652	ZNF775	89	50.857	Scleropages_formosus
ENSHBUG00000012758	-	91	45.245	ENSSDUG00000020595	-	89	44.550	Seriola_dumerili
ENSHBUG00000012758	-	91	45.798	ENSSDUG00000004089	-	95	47.059	Seriola_dumerili
ENSHBUG00000012758	-	99	54.859	ENSSDUG00000005401	-	93	54.749	Seriola_dumerili
ENSHBUG00000012758	-	91	52.012	ENSSPUG00000007092	-	50	52.012	Sphenodon_punctatus
ENSHBUG00000012758	-	90	50.806	ENSSPUG00000007064	-	98	51.562	Sphenodon_punctatus
ENSHBUG00000012758	-	99	48.583	ENSSPAG00000009587	-	99	52.121	Stegastes_partitus
ENSHBUG00000012758	-	89	43.415	ENSSSCG00000032098	-	76	41.509	Sus_scrofa
ENSHBUG00000012758	-	88	48.780	ENSTTRG00000004891	-	63	48.780	Tursiops_truncatus
ENSHBUG00000012758	-	88	48.936	ENSXETG00000030967	-	99	51.282	Xenopus_tropicalis
ENSHBUG00000012758	-	89	39.597	ENSXETG00000015125	-	97	39.552	Xenopus_tropicalis