EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000012903 (Gene tree)
Gene ID: 102290175
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 14087 bases
Position: chrJH425365.1:693633-707719
Accession: 102290175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011166	CPL	PF08144.11	1.3e-48	1	1
ENSHBUP00000011195	CPL	PF08144.11	3.3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000018265	-	1794	-	ENSHBUP00000011166	597 (aa)	-	-
ENSHBUT00000018299	-	1797	XM_014333388	ENSHBUP00000011195	598 (aa)	XP_014188874	-

Gene Model

Click here to download ENSHBUG00000012903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000012903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000012903	pum3	80	57.455	ENSG00000080608	PUM3	98	54.167	Homo_sapiens
ENSHBUG00000012903	pum3	100	66.127	ENSAPOG00000020252	pum3	100	68.541	Acanthochromis_polyacanthus
ENSHBUG00000012903	pum3	80	56.972	ENSAMEG00000012187	PUM3	99	50.539	Ailuropoda_melanoleuca
ENSHBUG00000012903	pum3	88	76.325	ENSACIG00000009786	pum3	96	76.174	Amphilophus_citrinellus
ENSHBUG00000012903	pum3	100	66.568	ENSAOCG00000004439	pum3	100	68.693	Amphiprion_ocellaris
ENSHBUG00000012903	pum3	100	66.716	ENSAPEG00000020523	pum3	100	68.845	Amphiprion_percula
ENSHBUG00000012903	pum3	97	69.552	ENSATEG00000005799	pum3	99	68.875	Anabas_testudineus
ENSHBUG00000012903	pum3	92	51.351	ENSAPLG00000002920	PUM3	88	53.650	Anas_platyrhynchos
ENSHBUG00000012903	pum3	89	50.356	ENSACAG00000003174	PUM3	99	49.406	Anolis_carolinensis
ENSHBUG00000012903	pum3	99	48.645	ENSANAG00000024520	PUM3	99	50.767	Aotus_nancymaae
ENSHBUG00000012903	pum3	97	84.080	ENSACLG00000001017	pum3	100	83.153	Astatotilapia_calliptera
ENSHBUG00000012903	pum3	99	55.678	ENSAMXG00000020911	pum3	99	55.678	Astyanax_mexicanus
ENSHBUG00000012903	pum3	96	51.387	ENSBTAG00000013357	PUM3	99	50.153	Bos_taurus
ENSHBUG00000012903	pum3	99	48.795	ENSCJAG00000010917	PUM3	99	50.307	Callithrix_jacchus
ENSHBUG00000012903	pum3	94	51.311	ENSCAFG00000002035	PUM3	99	50.077	Canis_familiaris
ENSHBUG00000012903	pum3	94	51.311	ENSCAFG00020026867	PUM3	99	50.077	Canis_lupus_dingo
ENSHBUG00000012903	pum3	96	51.550	ENSCHIG00000021559	PUM3	99	50.307	Capra_hircus
ENSHBUG00000012903	pum3	99	49.847	ENSTSYG00000007481	PUM3	99	49.847	Carlito_syrichta
ENSHBUG00000012903	pum3	98	49.038	ENSCAPG00000010592	-	92	50.906	Cavia_aperea
ENSHBUG00000012903	pum3	99	50.159	ENSCPOG00000008552	-	93	51.650	Cavia_porcellus
ENSHBUG00000012903	pum3	99	48.773	ENSCCAG00000032650	PUM3	93	52.796	Cebus_capucinus
ENSHBUG00000012903	pum3	99	50.613	ENSCATG00000024880	PUM3	99	50.613	Cercocebus_atys
ENSHBUG00000012903	pum3	99	48.710	ENSCLAG00000011892	PUM3	99	50.307	Chinchilla_lanigera
ENSHBUG00000012903	pum3	99	48.710	ENSCSAG00000008691	PUM3	99	50.767	Chlorocebus_sabaeus
ENSHBUG00000012903	pum3	79	48.600	ENSCHOG00000002535	PUM3	95	41.321	Choloepus_hoffmanni
ENSHBUG00000012903	pum3	80	57.968	ENSCPBG00000025470	PUM3	95	50.394	Chrysemys_picta_bellii
ENSHBUG00000012903	pum3	74	34.737	ENSCING00000024199	-	84	34.737	Ciona_intestinalis
ENSHBUG00000012903	pum3	80	35.098	ENSCSAVG00000006072	-	96	34.185	Ciona_savignyi
ENSHBUG00000012903	pum3	99	49.160	ENSCANG00000006142	PUM3	99	50.842	Colobus_angolensis_palliatus
ENSHBUG00000012903	pum3	96	50.328	ENSCGRG00001016402	Pum3	99	49.846	Cricetulus_griseus_chok1gshd
ENSHBUG00000012903	pum3	96	50.328	ENSCGRG00000010207	Pum3	99	49.846	Cricetulus_griseus_crigri
ENSHBUG00000012903	pum3	88	61.713	ENSCSEG00000001565	pum3	99	60.702	Cynoglossus_semilaevis
ENSHBUG00000012903	pum3	69	80.269	ENSCVAG00000006550	pum3	92	81.166	Cyprinodon_variegatus
ENSHBUG00000012903	pum3	99	55.732	ENSDARG00000087779	pum3	99	56.090	Danio_rerio
ENSHBUG00000012903	pum3	99	42.508	ENSDNOG00000008157	PUM3	70	44.257	Dasypus_novemcinctus
ENSHBUG00000012903	pum3	80	56.660	ENSETEG00000015331	PUM3	84	54.296	Echinops_telfairi
ENSHBUG00000012903	pum3	77	35.010	ENSEBUG00000011586	pum3	73	35.020	Eptatretus_burgeri
ENSHBUG00000012903	pum3	80	56.944	ENSEASG00005010350	PUM3	99	50.000	Equus_asinus_asinus
ENSHBUG00000012903	pum3	80	56.944	ENSECAG00000017193	PUM3	99	50.000	Equus_caballus
ENSHBUG00000012903	pum3	89	48.850	ENSEEUG00000010314	PUM3	100	48.600	Erinaceus_europaeus
ENSHBUG00000012903	pum3	96	57.072	ENSELUG00000002215	pum3	93	56.486	Esox_lucius
ENSHBUG00000012903	pum3	99	49.611	ENSFALG00000010509	PUM3	99	49.611	Ficedula_albicollis
ENSHBUG00000012903	pum3	99	49.240	ENSFDAG00000021027	PUM3	99	50.384	Fukomys_damarensis
ENSHBUG00000012903	pum3	89	67.801	ENSFHEG00000015576	pum3	100	67.801	Fundulus_heteroclitus
ENSHBUG00000012903	pum3	85	61.567	ENSGMOG00000014217	pum3	99	61.567	Gadus_morhua
ENSHBUG00000012903	pum3	80	57.371	ENSGALG00000010178	PUM3	89	52.797	Gallus_gallus
ENSHBUG00000012903	pum3	56	65.753	ENSGAFG00000001930	pum3	62	65.753	Gambusia_affinis
ENSHBUG00000012903	pum3	84	69.945	ENSGACG00000017878	pum3	99	69.945	Gasterosteus_aculeatus
ENSHBUG00000012903	pum3	99	50.395	ENSGAGG00000018983	PUM3	99	50.395	Gopherus_agassizii
ENSHBUG00000012903	pum3	95	51.505	ENSGGOG00000006143	PUM3	99	49.772	Gorilla_gorilla
ENSHBUG00000012903	pum3	99	49.008	ENSHGLG00000015868	-	99	50.615	Heterocephalus_glaber_female
ENSHBUG00000012903	pum3	99	49.008	ENSHGLG00100018825	PUM3	99	50.615	Heterocephalus_glaber_male
ENSHBUG00000012903	pum3	97	60.479	ENSHCOG00000010306	pum3	100	61.169	Hippocampus_comes
ENSHBUG00000012903	pum3	92	56.126	ENSIPUG00000024801	pum3	99	55.292	Ictalurus_punctatus
ENSHBUG00000012903	pum3	99	49.160	ENSSTOG00000009586	PUM3	99	50.077	Ictidomys_tridecemlineatus
ENSHBUG00000012903	pum3	99	49.002	ENSJJAG00000012563	Pum3	99	49.462	Jaculus_jaculus
ENSHBUG00000012903	pum3	100	65.991	ENSKMAG00000010277	pum3	100	68.069	Kryptolebias_marmoratus
ENSHBUG00000012903	pum3	100	66.109	ENSLBEG00000012213	pum3	100	67.933	Labrus_bergylta
ENSHBUG00000012903	pum3	99	49.922	ENSLACG00000008312	PUM3	99	49.610	Latimeria_chalumnae
ENSHBUG00000012903	pum3	100	54.331	ENSLOCG00000012529	pum3	100	54.331	Lepisosteus_oculatus
ENSHBUG00000012903	pum3	98	49.298	ENSLAFG00000017341	PUM3	99	49.616	Loxodonta_africana
ENSHBUG00000012903	pum3	99	48.558	ENSMFAG00000001430	PUM3	99	50.613	Macaca_fascicularis
ENSHBUG00000012903	pum3	99	48.558	ENSMMUG00000002362	PUM3	98	50.613	Macaca_mulatta
ENSHBUG00000012903	pum3	99	48.558	ENSMNEG00000035288	PUM3	99	50.613	Macaca_nemestrina
ENSHBUG00000012903	pum3	99	48.567	ENSMLEG00000034820	PUM3	99	50.613	Mandrillus_leucophaeus
ENSHBUG00000012903	pum3	99	66.565	ENSMAMG00000022861	pum3	99	68.147	Mastacembelus_armatus
ENSHBUG00000012903	pum3	95	90.713	ENSMZEG00005014205	pum3	99	88.254	Maylandia_zebra
ENSHBUG00000012903	pum3	86	48.446	ENSMGAG00000002255	PUM3	93	48.785	Meleagris_gallopavo
ENSHBUG00000012903	pum3	99	48.476	ENSMAUG00000009733	Pum3	99	49.770	Mesocricetus_auratus
ENSHBUG00000012903	pum3	99	48.698	ENSMICG00000045916	PUM3	87	50.460	Microcebus_murinus
ENSHBUG00000012903	pum3	99	48.392	ENSMOCG00000019519	-	99	49.691	Microtus_ochrogaster
ENSHBUG00000012903	pum3	99	48.357	ENSMOCG00000014830	-	99	48.357	Microtus_ochrogaster
ENSHBUG00000012903	pum3	93	63.462	ENSMMOG00000012184	pum3	98	63.502	Mola_mola
ENSHBUG00000012903	pum3	80	55.578	ENSMODG00000015417	PUM3	79	51.211	Monodelphis_domestica
ENSHBUG00000012903	pum3	100	66.930	ENSMALG00000022164	pum3	92	69.462	Monopterus_albus
ENSHBUG00000012903	pum3	96	49.836	MGP_CAROLIEiJ_G0022845	Pum3	99	48.923	Mus_caroli
ENSHBUG00000012903	pum3	96	49.016	ENSMUSG00000041360	Pum3	99	48.462	Mus_musculus
ENSHBUG00000012903	pum3	80	54.960	MGP_PahariEiJ_G0014338	Pum3	99	49.155	Mus_pahari
ENSHBUG00000012903	pum3	96	49.016	MGP_SPRETEiJ_G0023763	Pum3	99	48.462	Mus_spretus
ENSHBUG00000012903	pum3	96	50.082	ENSMPUG00000005125	PUM3	99	49.616	Mustela_putorius_furo
ENSHBUG00000012903	pum3	80	57.800	ENSMLUG00000002309	PUM3	99	51.156	Myotis_lucifugus
ENSHBUG00000012903	pum3	80	57.430	ENSNGAG00000019468	Pum3	88	52.373	Nannospalax_galili
ENSHBUG00000012903	pum3	97	88.057	ENSNBRG00000021370	pum3	100	88.057	Neolamprologus_brichardi
ENSHBUG00000012903	pum3	96	50.984	ENSNLEG00000008712	PUM3	99	50.920	Nomascus_leucogenys
ENSHBUG00000012903	pum3	64	63.861	ENSMEUG00000013606	-	83	56.504	Notamacropus_eugenii
ENSHBUG00000012903	pum3	99	45.344	ENSODEG00000016477	-	99	45.954	Octodon_degus
ENSHBUG00000012903	pum3	99	49.618	ENSODEG00000003625	-	99	50.305	Octodon_degus
ENSHBUG00000012903	pum3	97	81.972	ENSONIG00000012733	pum3	100	81.048	Oreochromis_niloticus
ENSHBUG00000012903	pum3	80	54.563	ENSOANG00000014995	PUM3	99	52.285	Ornithorhynchus_anatinus
ENSHBUG00000012903	pum3	99	47.866	ENSOCUG00000004189	-	99	49.847	Oryctolagus_cuniculus
ENSHBUG00000012903	pum3	96	50.493	ENSOCUG00000026104	-	99	49.923	Oryctolagus_cuniculus
ENSHBUG00000012903	pum3	100	60.215	ENSORLG00000014935	pum3	100	61.231	Oryzias_latipes
ENSHBUG00000012903	pum3	100	60.494	ENSORLG00020002841	pum3	100	61.692	Oryzias_latipes_hni
ENSHBUG00000012903	pum3	100	60.565	ENSORLG00015015906	pum3	100	61.846	Oryzias_latipes_hsok
ENSHBUG00000012903	pum3	100	60.709	ENSOMEG00000009427	pum3	100	61.479	Oryzias_melastigma
ENSHBUG00000012903	pum3	99	48.476	ENSOGAG00000008125	-	99	50.154	Otolemur_garnettii
ENSHBUG00000012903	pum3	79	43.227	ENSOGAG00000033481	-	99	39.048	Otolemur_garnettii
ENSHBUG00000012903	pum3	96	51.550	ENSOARG00000013337	PUM3	88	52.840	Ovis_aries
ENSHBUG00000012903	pum3	99	48.476	ENSPPAG00000041337	PUM3	99	50.077	Pan_paniscus
ENSHBUG00000012903	pum3	80	56.064	ENSPPRG00000000809	PUM3	93	51.741	Panthera_pardus
ENSHBUG00000012903	pum3	80	56.660	ENSPTIG00000021934	PUM3	93	52.239	Panthera_tigris_altaica
ENSHBUG00000012903	pum3	99	48.628	ENSPTRG00000020735	PUM3	99	50.230	Pan_troglodytes
ENSHBUG00000012903	pum3	99	48.862	ENSPANG00000025118	PUM3	99	50.767	Papio_anubis
ENSHBUG00000012903	pum3	99	54.688	ENSPKIG00000022249	pum3	92	55.986	Paramormyrops_kingsleyae
ENSHBUG00000012903	pum3	99	49.296	ENSPSIG00000016272	PUM3	99	50.078	Pelodiscus_sinensis
ENSHBUG00000012903	pum3	78	65.253	ENSPMGG00000021261	pum3	99	66.263	Periophthalmus_magnuspinnatus
ENSHBUG00000012903	pum3	89	53.571	ENSPEMG00000019340	-	99	42.790	Peromyscus_maniculatus_bairdii
ENSHBUG00000012903	pum3	80	57.669	ENSPCIG00000030598	PUM3	67	57.669	Phascolarctos_cinereus
ENSHBUG00000012903	pum3	100	62.323	ENSPFOG00000001719	pum3	100	63.355	Poecilia_formosa
ENSHBUG00000012903	pum3	97	63.027	ENSPLAG00000020010	pum3	100	62.675	Poecilia_latipinna
ENSHBUG00000012903	pum3	97	62.559	ENSPMEG00000017451	pum3	100	62.208	Poecilia_mexicana
ENSHBUG00000012903	pum3	99	48.946	ENSPPYG00000019255	PUM3	99	50.531	Pongo_abelii
ENSHBUG00000012903	pum3	99	41.892	ENSPCAG00000005797	PUM3	95	43.353	Procavia_capensis
ENSHBUG00000012903	pum3	96	50.656	ENSPCOG00000027325	PUM3	99	50.460	Propithecus_coquereli
ENSHBUG00000012903	pum3	99	49.772	ENSPVAG00000016135	PUM3	95	49.772	Pteropus_vampyrus
ENSHBUG00000012903	pum3	97	84.031	ENSPNYG00000016124	pum3	100	83.101	Pundamilia_nyererei
ENSHBUG00000012903	pum3	99	54.602	ENSPNAG00000026524	pum3	99	55.485	Pygocentrus_nattereri
ENSHBUG00000012903	pum3	96	49.672	ENSRNOG00000048356	RGD1308750	91	51.858	Rattus_norvegicus
ENSHBUG00000012903	pum3	96	50.000	ENSRNOG00000012574	Pum3	89	52.850	Rattus_norvegicus
ENSHBUG00000012903	pum3	99	48.855	ENSRBIG00000036924	PUM3	99	50.689	Rhinopithecus_bieti
ENSHBUG00000012903	pum3	99	49.008	ENSRROG00000041089	PUM3	99	50.842	Rhinopithecus_roxellana
ENSHBUG00000012903	pum3	99	48.494	ENSSBOG00000028066	PUM3	99	50.460	Saimiri_boliviensis_boliviensis
ENSHBUG00000012903	pum3	99	48.769	ENSSHAG00000003730	PUM3	99	49.231	Sarcophilus_harrisii
ENSHBUG00000012903	pum3	97	54.286	ENSSFOG00015018778	pum3	93	55.674	Scleropages_formosus
ENSHBUG00000012903	pum3	100	66.052	ENSSMAG00000013236	pum3	99	67.846	Scophthalmus_maximus
ENSHBUG00000012903	pum3	100	66.018	ENSSDUG00000001887	pum3	99	68.263	Seriola_dumerili
ENSHBUG00000012903	pum3	100	66.818	ENSSLDG00000015766	pum3	99	68.939	Seriola_lalandi_dorsalis
ENSHBUG00000012903	pum3	96	50.330	ENSSARG00000000579	PUM3	97	51.815	Sorex_araneus
ENSHBUG00000012903	pum3	93	51.783	ENSSPUG00000001707	PUM3	99	49.686	Sphenodon_punctatus
ENSHBUG00000012903	pum3	100	66.256	ENSSPAG00000003976	pum3	100	68.624	Stegastes_partitus
ENSHBUG00000012903	pum3	99	50.853	ENSSSCG00000005227	PUM3	99	50.307	Sus_scrofa
ENSHBUG00000012903	pum3	99	49.765	ENSTGUG00000005339	PUM3	99	50.157	Taeniopygia_guttata
ENSHBUG00000012903	pum3	98	65.113	ENSTRUG00000004074	pum3	99	64.511	Takifugu_rubripes
ENSHBUG00000012903	pum3	97	66.934	ENSTNIG00000010325	pum3	98	67.367	Tetraodon_nigroviridis
ENSHBUG00000012903	pum3	80	40.504	ENSTBEG00000013058	PUM3	85	38.977	Tupaia_belangeri
ENSHBUG00000012903	pum3	93	45.819	ENSTTRG00000001062	PUM3	87	45.685	Tursiops_truncatus
ENSHBUG00000012903	pum3	97	47.446	ENSUMAG00000018443	PUM3	94	54.105	Ursus_maritimus
ENSHBUG00000012903	pum3	93	51.510	ENSVPAG00000010766	PUM3	89	51.531	Vicugna_pacos
ENSHBUG00000012903	pum3	94	51.148	ENSVVUG00000006527	PUM3	99	49.923	Vulpes_vulpes
ENSHBUG00000012903	pum3	95	42.667	ENSXETG00000011707	pum3	99	41.186	Xenopus_tropicalis
ENSHBUG00000012903	pum3	92	63.516	ENSXCOG00000006725	pum3	100	63.561	Xiphophorus_couchianus
ENSHBUG00000012903	pum3	100	59.398	ENSXMAG00000002926	pum3	100	59.398	Xiphophorus_maculatus