EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000013207 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 49340 bases
Position: chrJH425441.1:1255340-1304679
Accession: 102291561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011525	S1	PF00575.23	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000018734	-	2760	XM_014336226	ENSHBUP00000011525	919 (aa)	XP_014191712	-

Gene Model

Click here to download ENSHBUG00000013207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013207	si:ch211-117n7.8	96	46.414	ENSG00000068784	SRBD1	90	47.879	Homo_sapiens
ENSHBUG00000013207	si:ch211-117n7.8	100	70.452	ENSAPOG00000005103	si:ch211-117n7.8	97	70.151	Acanthochromis_polyacanthus
ENSHBUG00000013207	si:ch211-117n7.8	96	47.213	ENSAMEG00000005993	SRBD1	85	50.415	Ailuropoda_melanoleuca
ENSHBUG00000013207	si:ch211-117n7.8	99	72.553	ENSACIG00000009875	si:ch211-117n7.8	100	72.553	Amphilophus_citrinellus
ENSHBUG00000013207	si:ch211-117n7.8	100	68.983	ENSAOCG00000024718	si:ch211-117n7.8	97	68.983	Amphiprion_ocellaris
ENSHBUG00000013207	si:ch211-117n7.8	100	69.725	ENSAPEG00000002645	si:ch211-117n7.8	99	69.725	Amphiprion_percula
ENSHBUG00000013207	si:ch211-117n7.8	100	67.556	ENSATEG00000010844	si:ch211-117n7.8	97	67.659	Anabas_testudineus
ENSHBUG00000013207	si:ch211-117n7.8	95	48.796	ENSAPLG00000006313	SRBD1	96	48.431	Anas_platyrhynchos
ENSHBUG00000013207	si:ch211-117n7.8	99	45.333	ENSANAG00000025573	SRBD1	89	47.743	Aotus_nancymaae
ENSHBUG00000013207	si:ch211-117n7.8	100	81.288	ENSACLG00000024219	si:ch211-117n7.8	97	81.288	Astatotilapia_calliptera
ENSHBUG00000013207	si:ch211-117n7.8	99	56.762	ENSAMXG00000004294	SRBD1	97	57.787	Astyanax_mexicanus
ENSHBUG00000013207	si:ch211-117n7.8	97	45.106	ENSBTAG00000007508	SRBD1	86	47.826	Bos_taurus
ENSHBUG00000013207	si:ch211-117n7.8	50	33.403	WBGene00022830	ZK973.1	59	33.403	Caenorhabditis_elegans
ENSHBUG00000013207	si:ch211-117n7.8	97	46.218	ENSCJAG00000000727	SRBD1	90	47.486	Callithrix_jacchus
ENSHBUG00000013207	si:ch211-117n7.8	86	50.769	ENSCAFG00000002554	SRBD1	85	50.651	Canis_familiaris
ENSHBUG00000013207	si:ch211-117n7.8	86	51.574	ENSCAFG00020026284	SRBD1	98	51.267	Canis_lupus_dingo
ENSHBUG00000013207	si:ch211-117n7.8	88	49.769	ENSCHIG00000016535	SRBD1	86	49.423	Capra_hircus
ENSHBUG00000013207	si:ch211-117n7.8	99	47.503	ENSTSYG00000012797	SRBD1	96	47.594	Carlito_syrichta
ENSHBUG00000013207	si:ch211-117n7.8	96	47.594	ENSCPOG00000004773	SRBD1	95	47.279	Cavia_porcellus
ENSHBUG00000013207	si:ch211-117n7.8	96	46.429	ENSCCAG00000025589	SRBD1	90	47.709	Cebus_capucinus
ENSHBUG00000013207	si:ch211-117n7.8	96	46.842	ENSCATG00000039530	SRBD1	90	48.276	Cercocebus_atys
ENSHBUG00000013207	si:ch211-117n7.8	99	46.177	ENSCLAG00000008623	SRBD1	84	51.090	Chinchilla_lanigera
ENSHBUG00000013207	si:ch211-117n7.8	91	48.280	ENSCSAG00000013350	SRBD1	90	48.169	Chlorocebus_sabaeus
ENSHBUG00000013207	si:ch211-117n7.8	65	74.419	ENSCHOG00000003805	SRBD1	63	74.419	Choloepus_hoffmanni
ENSHBUG00000013207	si:ch211-117n7.8	85	51.562	ENSCPBG00000005677	SRBD1	97	47.862	Chrysemys_picta_bellii
ENSHBUG00000013207	si:ch211-117n7.8	76	38.981	ENSCING00000005950	-	92	38.981	Ciona_intestinalis
ENSHBUG00000013207	si:ch211-117n7.8	76	40.112	ENSCSAVG00000000861	-	90	40.112	Ciona_savignyi
ENSHBUG00000013207	si:ch211-117n7.8	99	45.799	ENSCANG00000016307	SRBD1	89	48.086	Colobus_angolensis_palliatus
ENSHBUG00000013207	si:ch211-117n7.8	86	50.721	ENSCGRG00001000513	Srbd1	85	50.721	Cricetulus_griseus_chok1gshd
ENSHBUG00000013207	si:ch211-117n7.8	86	50.721	ENSCGRG00000002283	Srbd1	85	50.721	Cricetulus_griseus_crigri
ENSHBUG00000013207	si:ch211-117n7.8	100	62.055	ENSCSEG00000000856	si:ch211-117n7.8	97	62.055	Cynoglossus_semilaevis
ENSHBUG00000013207	si:ch211-117n7.8	100	65.128	ENSCVAG00000020212	si:ch211-117n7.8	98	65.128	Cyprinodon_variegatus
ENSHBUG00000013207	si:ch211-117n7.8	86	49.410	ENSDNOG00000018686	SRBD1	84	49.292	Dasypus_novemcinctus
ENSHBUG00000013207	si:ch211-117n7.8	99	46.660	ENSDORG00000010468	Srbd1	84	50.907	Dipodomys_ordii
ENSHBUG00000013207	si:ch211-117n7.8	66	40.299	FBgn0051156	CG31156	61	40.299	Drosophila_melanogaster
ENSHBUG00000013207	si:ch211-117n7.8	80	55.596	ENSETEG00000000739	SRBD1	63	55.435	Echinops_telfairi
ENSHBUG00000013207	si:ch211-117n7.8	80	42.023	ENSEBUG00000008902	si:ch211-117n7.8	100	42.023	Eptatretus_burgeri
ENSHBUG00000013207	si:ch211-117n7.8	96	47.650	ENSEASG00005003132	SRBD1	98	54.815	Equus_asinus_asinus
ENSHBUG00000013207	si:ch211-117n7.8	96	47.126	ENSECAG00000013865	SRBD1	83	50.414	Equus_caballus
ENSHBUG00000013207	si:ch211-117n7.8	99	58.227	ENSELUG00000012592	si:ch211-117n7.8	97	57.620	Esox_lucius
ENSHBUG00000013207	si:ch211-117n7.8	86	50.651	ENSFCAG00000005101	SRBD1	84	50.355	Felis_catus
ENSHBUG00000013207	si:ch211-117n7.8	87	50.766	ENSFALG00000012966	SRBD1	97	46.708	Ficedula_albicollis
ENSHBUG00000013207	si:ch211-117n7.8	99	46.543	ENSFDAG00000016670	SRBD1	95	47.511	Fukomys_damarensis
ENSHBUG00000013207	si:ch211-117n7.8	100	66.700	ENSFHEG00000019480	si:ch211-117n7.8	97	65.996	Fundulus_heteroclitus
ENSHBUG00000013207	si:ch211-117n7.8	85	52.053	ENSGALG00000009990	SRBD1	97	47.477	Gallus_gallus
ENSHBUG00000013207	si:ch211-117n7.8	100	67.073	ENSGAFG00000019664	si:ch211-117n7.8	97	67.073	Gambusia_affinis
ENSHBUG00000013207	si:ch211-117n7.8	61	81.058	ENSGACG00000010794	si:ch211-117n7.8	94	81.058	Gasterosteus_aculeatus
ENSHBUG00000013207	si:ch211-117n7.8	85	52.043	ENSGAGG00000006166	SRBD1	99	51.683	Gopherus_agassizii
ENSHBUG00000013207	si:ch211-117n7.8	99	46.130	ENSGGOG00000005910	SRBD1	92	48.444	Gorilla_gorilla
ENSHBUG00000013207	si:ch211-117n7.8	99	46.557	ENSHGLG00000018153	-	97	45.949	Heterocephalus_glaber_female
ENSHBUG00000013207	si:ch211-117n7.8	99	46.557	ENSHGLG00100015183	-	97	45.949	Heterocephalus_glaber_male
ENSHBUG00000013207	si:ch211-117n7.8	98	58.431	ENSIPUG00000009661	srbd1	97	58.125	Ictalurus_punctatus
ENSHBUG00000013207	si:ch211-117n7.8	86	51.319	ENSSTOG00000005898	SRBD1	85	51.319	Ictidomys_tridecemlineatus
ENSHBUG00000013207	si:ch211-117n7.8	99	46.974	ENSJJAG00000022244	Srbd1	95	47.701	Jaculus_jaculus
ENSHBUG00000013207	si:ch211-117n7.8	100	69.145	ENSKMAG00000003473	si:ch211-117n7.8	97	68.902	Kryptolebias_marmoratus
ENSHBUG00000013207	si:ch211-117n7.8	100	66.902	ENSLBEG00000027518	si:ch211-117n7.8	97	66.599	Labrus_bergylta
ENSHBUG00000013207	si:ch211-117n7.8	86	51.900	ENSLACG00000009790	SRBD1	99	51.781	Latimeria_chalumnae
ENSHBUG00000013207	si:ch211-117n7.8	99	53.374	ENSLOCG00000016360	si:ch211-117n7.8	97	52.429	Lepisosteus_oculatus
ENSHBUG00000013207	si:ch211-117n7.8	96	46.737	ENSMFAG00000042026	SRBD1	90	48.165	Macaca_fascicularis
ENSHBUG00000013207	si:ch211-117n7.8	99	45.957	ENSMMUG00000003490	SRBD1	90	48.165	Macaca_mulatta
ENSHBUG00000013207	si:ch211-117n7.8	96	45.675	ENSMNEG00000034701	SRBD1	90	47.046	Macaca_nemestrina
ENSHBUG00000013207	si:ch211-117n7.8	96	46.737	ENSMLEG00000000745	SRBD1	90	48.165	Mandrillus_leucophaeus
ENSHBUG00000013207	si:ch211-117n7.8	100	68.750	ENSMAMG00000021921	si:ch211-117n7.8	97	69.262	Mastacembelus_armatus
ENSHBUG00000013207	si:ch211-117n7.8	100	81.388	ENSMZEG00005027369	si:ch211-117n7.8	97	81.388	Maylandia_zebra
ENSHBUG00000013207	si:ch211-117n7.8	76	56.379	ENSMGAG00000010273	SRBD1	92	56.379	Meleagris_gallopavo
ENSHBUG00000013207	si:ch211-117n7.8	76	52.349	ENSMAUG00000013916	Srbd1	89	52.349	Mesocricetus_auratus
ENSHBUG00000013207	si:ch211-117n7.8	96	47.440	ENSMICG00000007835	SRBD1	95	47.730	Microcebus_murinus
ENSHBUG00000013207	si:ch211-117n7.8	99	46.557	ENSMOCG00000018716	Srbd1	85	50.481	Microtus_ochrogaster
ENSHBUG00000013207	si:ch211-117n7.8	99	66.090	ENSMMOG00000007507	si:ch211-117n7.8	100	65.988	Mola_mola
ENSHBUG00000013207	si:ch211-117n7.8	100	67.002	ENSMALG00000001562	si:ch211-117n7.8	97	67.404	Monopterus_albus
ENSHBUG00000013207	si:ch211-117n7.8	95	46.716	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.882	Mus_caroli
ENSHBUG00000013207	si:ch211-117n7.8	99	46.035	ENSMUSG00000024135	Srbd1	100	54.225	Mus_musculus
ENSHBUG00000013207	si:ch211-117n7.8	99	45.417	MGP_PahariEiJ_G0020924	Srbd1	91	47.875	Mus_pahari
ENSHBUG00000013207	si:ch211-117n7.8	99	46.138	MGP_SPRETEiJ_G0022850	Srbd1	91	48.546	Mus_spretus
ENSHBUG00000013207	si:ch211-117n7.8	95	47.225	ENSMLUG00000007039	SRBD1	96	47.009	Myotis_lucifugus
ENSHBUG00000013207	si:ch211-117n7.8	95	45.538	ENSNGAG00000011893	Srbd1	96	45.538	Nannospalax_galili
ENSHBUG00000013207	si:ch211-117n7.8	99	82.384	ENSNBRG00000012873	si:ch211-117n7.8	99	82.384	Neolamprologus_brichardi
ENSHBUG00000013207	si:ch211-117n7.8	96	46.477	ENSNLEG00000016877	SRBD1	90	47.942	Nomascus_leucogenys
ENSHBUG00000013207	si:ch211-117n7.8	96	47.357	ENSODEG00000012095	SRBD1	95	47.219	Octodon_degus
ENSHBUG00000013207	si:ch211-117n7.8	100	80.382	ENSONIG00000000945	si:ch211-117n7.8	100	80.912	Oreochromis_niloticus
ENSHBUG00000013207	si:ch211-117n7.8	96	47.324	ENSOCUG00000015385	SRBD1	95	47.720	Oryctolagus_cuniculus
ENSHBUG00000013207	si:ch211-117n7.8	100	62.198	ENSORLG00000004427	si:ch211-117n7.8	97	61.895	Oryzias_latipes
ENSHBUG00000013207	si:ch211-117n7.8	100	65.055	ENSORLG00020012792	si:ch211-117n7.8	97	64.753	Oryzias_latipes_hni
ENSHBUG00000013207	si:ch211-117n7.8	100	64.819	ENSORLG00015018598	si:ch211-117n7.8	97	64.516	Oryzias_latipes_hsok
ENSHBUG00000013207	si:ch211-117n7.8	90	81.061	ENSOMEG00000012229	si:ch211-117n7.8	96	81.061	Oryzias_melastigma
ENSHBUG00000013207	si:ch211-117n7.8	99	44.726	ENSOGAG00000001076	SRBD1	91	46.681	Otolemur_garnettii
ENSHBUG00000013207	si:ch211-117n7.8	88	46.171	ENSOARG00000005958	SRBD1	87	46.060	Ovis_aries
ENSHBUG00000013207	si:ch211-117n7.8	86	50.542	ENSPPAG00000038442	SRBD1	90	48.144	Pan_paniscus
ENSHBUG00000013207	si:ch211-117n7.8	86	50.948	ENSPPRG00000003449	SRBD1	90	48.835	Panthera_pardus
ENSHBUG00000013207	si:ch211-117n7.8	86	50.948	ENSPTIG00000012495	SRBD1	84	50.829	Panthera_tigris_altaica
ENSHBUG00000013207	si:ch211-117n7.8	86	50.179	ENSPTRG00000011889	SRBD1	90	47.826	Pan_troglodytes
ENSHBUG00000013207	si:ch211-117n7.8	96	46.737	ENSPANG00000008063	SRBD1	90	48.165	Papio_anubis
ENSHBUG00000013207	si:ch211-117n7.8	95	56.578	ENSPKIG00000021973	si:ch211-117n7.8	96	56.290	Paramormyrops_kingsleyae
ENSHBUG00000013207	si:ch211-117n7.8	85	51.442	ENSPSIG00000008992	SRBD1	84	51.199	Pelodiscus_sinensis
ENSHBUG00000013207	si:ch211-117n7.8	99	62.819	ENSPMGG00000013348	si:ch211-117n7.8	99	63.068	Periophthalmus_magnuspinnatus
ENSHBUG00000013207	si:ch211-117n7.8	97	45.021	ENSPEMG00000020684	Srbd1	84	48.463	Peromyscus_maniculatus_bairdii
ENSHBUG00000013207	si:ch211-117n7.8	100	67.518	ENSPFOG00000010650	si:ch211-117n7.8	97	67.378	Poecilia_formosa
ENSHBUG00000013207	si:ch211-117n7.8	100	67.620	ENSPLAG00000002141	si:ch211-117n7.8	97	67.480	Poecilia_latipinna
ENSHBUG00000013207	si:ch211-117n7.8	100	67.683	ENSPMEG00000018537	si:ch211-117n7.8	97	67.480	Poecilia_mexicana
ENSHBUG00000013207	si:ch211-117n7.8	99	66.906	ENSPREG00000003258	si:ch211-117n7.8	97	66.701	Poecilia_reticulata
ENSHBUG00000013207	si:ch211-117n7.8	99	42.761	ENSPPYG00000012444	SRBD1	88	44.620	Pongo_abelii
ENSHBUG00000013207	si:ch211-117n7.8	74	49.425	ENSPCAG00000005629	SRBD1	74	49.138	Procavia_capensis
ENSHBUG00000013207	si:ch211-117n7.8	96	43.962	ENSPCOG00000017669	SRBD1	94	44.004	Propithecus_coquereli
ENSHBUG00000013207	si:ch211-117n7.8	76	50.552	ENSPVAG00000001782	SRBD1	73	50.276	Pteropus_vampyrus
ENSHBUG00000013207	si:ch211-117n7.8	99	86.426	ENSPNYG00000000508	si:ch211-117n7.8	100	86.426	Pundamilia_nyererei
ENSHBUG00000013207	si:ch211-117n7.8	97	58.898	ENSPNAG00000013492	SRBD1	97	57.775	Pygocentrus_nattereri
ENSHBUG00000013207	si:ch211-117n7.8	85	50.181	ENSRNOG00000014720	Srbd1	83	50.181	Rattus_norvegicus
ENSHBUG00000013207	si:ch211-117n7.8	96	46.251	ENSRBIG00000033486	SRBD1	89	48.081	Rhinopithecus_bieti
ENSHBUG00000013207	si:ch211-117n7.8	96	46.251	ENSRROG00000041599	SRBD1	89	48.081	Rhinopithecus_roxellana
ENSHBUG00000013207	si:ch211-117n7.8	99	45.231	ENSSBOG00000024982	SRBD1	90	47.492	Saimiri_boliviensis_boliviensis
ENSHBUG00000013207	si:ch211-117n7.8	99	53.008	ENSSFOG00015001128	si:ch211-117n7.8	91	57.092	Scleropages_formosus
ENSHBUG00000013207	si:ch211-117n7.8	100	67.771	ENSSMAG00000018256	si:ch211-117n7.8	97	67.771	Scophthalmus_maximus
ENSHBUG00000013207	si:ch211-117n7.8	100	69.604	ENSSLDG00000023189	si:ch211-117n7.8	99	69.802	Seriola_lalandi_dorsalis
ENSHBUG00000013207	si:ch211-117n7.8	96	45.144	ENSSARG00000009740	SRBD1	96	44.802	Sorex_araneus
ENSHBUG00000013207	si:ch211-117n7.8	86	52.086	ENSSPUG00000010475	SRBD1	94	51.852	Sphenodon_punctatus
ENSHBUG00000013207	si:ch211-117n7.8	100	68.410	ENSSPAG00000008092	-	99	69.378	Stegastes_partitus
ENSHBUG00000013207	si:ch211-117n7.8	97	46.930	ENSSSCG00000008445	SRBD1	83	50.237	Sus_scrofa
ENSHBUG00000013207	si:ch211-117n7.8	85	51.384	ENSTGUG00000003878	SRBD1	100	51.322	Taeniopygia_guttata
ENSHBUG00000013207	si:ch211-117n7.8	99	62.747	ENSTRUG00000007080	si:ch211-117n7.8	98	66.186	Takifugu_rubripes
ENSHBUG00000013207	si:ch211-117n7.8	99	63.320	ENSTNIG00000007464	si:ch211-117n7.8	97	62.724	Tetraodon_nigroviridis
ENSHBUG00000013207	si:ch211-117n7.8	89	53.810	ENSTTRG00000011871	SRBD1	86	57.065	Tursiops_truncatus
ENSHBUG00000013207	si:ch211-117n7.8	86	50.888	ENSUAMG00000008126	SRBD1	97	54.874	Ursus_americanus
ENSHBUG00000013207	si:ch211-117n7.8	86	50.888	ENSUMAG00000012902	SRBD1	83	50.769	Ursus_maritimus
ENSHBUG00000013207	si:ch211-117n7.8	91	48.280	ENSVPAG00000006825	SRBD1	99	47.619	Vicugna_pacos
ENSHBUG00000013207	si:ch211-117n7.8	86	50.829	ENSVVUG00000005389	SRBD1	85	50.711	Vulpes_vulpes
ENSHBUG00000013207	si:ch211-117n7.8	99	41.071	ENSXETG00000002760	srbd1	96	40.377	Xenopus_tropicalis
ENSHBUG00000013207	si:ch211-117n7.8	100	67.581	ENSXMAG00000016861	si:ch211-117n7.8	97	67.378	Xiphophorus_maculatus