EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000013269 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: GTPase IMAP family member 4-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 3455 bases
Position: chrJH427195.1:11628-15082
Accession: 102298976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011620	MMR_HSR1	PF01926.23	3.9e-09	1	1
ENSHBUP00000011616	MMR_HSR1	PF01926.23	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000032185	-	3179	-	ENSHBUP00000011620	563 (aa)	-	-
ENSHBUT00000018853	-	3062	XM_014331298	ENSHBUP00000011616	672 (aa)	XP_014186784	-

Gene Model

Click here to download ENSHBUG00000013269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000013269	-	79	67.836	ENSHBUG00000011672	-	87	66.316
ENSHBUG00000013269	-	79	63.348	ENSHBUG00000020633	-	85	60.408
ENSHBUG00000013269	-	86	52.761	ENSHBUG00000003015	-	84	52.743
ENSHBUG00000013269	-	90	61.448	ENSHBUG00000010247	-	98	58.615
ENSHBUG00000013269	-	87	60.241	ENSHBUG00000011703	-	83	60.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013269	-	90	57.957	ENSAPOG00000017368	-	98	56.835	Acanthochromis_polyacanthus
ENSHBUG00000013269	-	90	58.153	ENSAPOG00000008987	-	99	56.627	Acanthochromis_polyacanthus
ENSHBUG00000013269	-	87	50.102	ENSAPOG00000009034	-	97	47.810	Acanthochromis_polyacanthus
ENSHBUG00000013269	-	89	57.937	ENSACIG00000005198	-	87	57.367	Amphilophus_citrinellus
ENSHBUG00000013269	-	80	60.398	ENSAOCG00000022545	-	89	56.940	Amphiprion_ocellaris
ENSHBUG00000013269	-	91	49.423	ENSAOCG00000001095	-	78	47.458	Amphiprion_ocellaris
ENSHBUG00000013269	-	81	59.672	ENSATEG00000012058	-	92	59.307	Anabas_testudineus
ENSHBUG00000013269	-	86	53.484	ENSATEG00000011352	-	90	50.000	Anabas_testudineus
ENSHBUG00000013269	-	88	49.900	ENSATEG00000011336	-	86	52.258	Anabas_testudineus
ENSHBUG00000013269	-	90	49.146	ENSATEG00000011330	-	88	51.458	Anabas_testudineus
ENSHBUG00000013269	-	60	56.342	ENSATEG00000011735	-	91	55.587	Anabas_testudineus
ENSHBUG00000013269	-	82	59.611	ENSACLG00000005679	-	84	59.740	Astatotilapia_calliptera
ENSHBUG00000013269	-	90	51.480	ENSACLG00000004980	-	93	51.461	Astatotilapia_calliptera
ENSHBUG00000013269	-	90	60.861	ENSACLG00000012195	-	98	58.132	Astatotilapia_calliptera
ENSHBUG00000013269	-	72	60.049	ENSACLG00000005220	-	92	61.440	Astatotilapia_calliptera
ENSHBUG00000013269	-	91	45.351	ENSACLG00000024859	-	79	45.276	Astatotilapia_calliptera
ENSHBUG00000013269	-	92	45.802	ENSACLG00000024857	-	81	47.906	Astatotilapia_calliptera
ENSHBUG00000013269	-	55	42.500	ENSAMXG00000037741	-	87	56.279	Astyanax_mexicanus
ENSHBUG00000013269	-	55	45.016	ENSAMXG00000030288	-	83	43.831	Astyanax_mexicanus
ENSHBUG00000013269	-	63	40.941	ENSAMXG00000030783	-	90	40.909	Astyanax_mexicanus
ENSHBUG00000013269	-	52	40.067	ENSAMXG00000030715	-	78	39.355	Astyanax_mexicanus
ENSHBUG00000013269	-	94	41.248	ENSCVAG00000018481	-	90	40.496	Cyprinodon_variegatus
ENSHBUG00000013269	-	90	53.846	ENSCVAG00000023267	-	97	53.846	Cyprinodon_variegatus
ENSHBUG00000013269	-	67	40.129	ENSDARG00000086048	si:ch211-229i14.2	91	43.112	Danio_rerio
ENSHBUG00000013269	-	80	49.141	ENSELUG00000015135	-	84	40.514	Esox_lucius
ENSHBUG00000013269	-	82	52.189	ENSELUG00000015076	si:ch211-229i14.2	91	46.803	Esox_lucius
ENSHBUG00000013269	-	75	38.612	ENSELUG00000015106	-	67	50.649	Esox_lucius
ENSHBUG00000013269	-	83	50.842	ENSELUG00000005405	-	89	47.409	Esox_lucius
ENSHBUG00000013269	-	82	53.680	ENSFHEG00000000207	-	79	56.914	Fundulus_heteroclitus
ENSHBUG00000013269	-	89	46.129	ENSFHEG00000011334	-	94	47.797	Fundulus_heteroclitus
ENSHBUG00000013269	-	82	51.724	ENSFHEG00000019202	-	85	53.539	Fundulus_heteroclitus
ENSHBUG00000013269	-	90	51.050	ENSFHEG00000013865	-	94	50.242	Fundulus_heteroclitus
ENSHBUG00000013269	-	89	42.553	ENSGAFG00000015999	-	93	39.144	Gambusia_affinis
ENSHBUG00000013269	-	90	58.008	ENSGAFG00000015917	-	97	54.106	Gambusia_affinis
ENSHBUG00000013269	-	98	45.796	ENSGAFG00000015908	-	80	47.059	Gambusia_affinis
ENSHBUG00000013269	-	97	44.404	ENSGAFG00000001852	-	85	48.791	Gambusia_affinis
ENSHBUG00000013269	-	75	48.633	ENSGACG00000013107	-	93	44.845	Gasterosteus_aculeatus
ENSHBUG00000013269	-	90	36.877	ENSIPUG00000004161	-	83	36.700	Ictalurus_punctatus
ENSHBUG00000013269	-	51	41.261	ENSIPUG00000004131	-	63	51.515	Ictalurus_punctatus
ENSHBUG00000013269	-	88	45.582	ENSKMAG00000010293	-	89	45.000	Kryptolebias_marmoratus
ENSHBUG00000013269	-	89	49.336	ENSKMAG00000010851	-	94	49.239	Kryptolebias_marmoratus
ENSHBUG00000013269	-	50	60.851	ENSLBEG00000017021	-	90	72.222	Labrus_bergylta
ENSHBUG00000013269	-	60	65.174	ENSLBEG00000010625	-	95	65.174	Labrus_bergylta
ENSHBUG00000013269	-	67	62.775	ENSLBEG00000012647	-	87	67.536	Labrus_bergylta
ENSHBUG00000013269	-	69	60.860	ENSLBEG00000022878	-	91	64.888	Labrus_bergylta
ENSHBUG00000013269	-	90	56.202	ENSMAMG00000018175	-	88	58.824	Mastacembelus_armatus
ENSHBUG00000013269	-	90	64.902	ENSMAMG00000018170	-	96	65.815	Mastacembelus_armatus
ENSHBUG00000013269	-	92	44.717	ENSMAMG00000017849	-	82	47.807	Mastacembelus_armatus
ENSHBUG00000013269	-	73	43.992	ENSMAMG00000018061	-	92	45.144	Mastacembelus_armatus
ENSHBUG00000013269	-	72	66.093	ENSMAMG00000018162	si:ch211-229i14.2	83	69.251	Mastacembelus_armatus
ENSHBUG00000013269	-	76	50.231	ENSMAMG00000017884	-	79	48.966	Mastacembelus_armatus
ENSHBUG00000013269	-	81	44.235	ENSMAMG00000017906	-	76	42.597	Mastacembelus_armatus
ENSHBUG00000013269	-	54	51.155	ENSMZEG00005021732	-	91	50.000	Maylandia_zebra
ENSHBUG00000013269	-	56	47.354	ENSMZEG00005027841	-	90	47.354	Maylandia_zebra
ENSHBUG00000013269	-	79	48.423	ENSMZEG00005028364	-	88	48.758	Maylandia_zebra
ENSHBUG00000013269	-	98	55.219	ENSMALG00000001082	-	91	56.318	Monopterus_albus
ENSHBUG00000013269	-	72	44.444	ENSMALG00000004282	-	90	47.861	Monopterus_albus
ENSHBUG00000013269	-	79	63.063	ENSNBRG00000003245	-	86	59.146	Neolamprologus_brichardi
ENSHBUG00000013269	-	85	49.076	ENSNBRG00000014894	-	82	46.914	Neolamprologus_brichardi
ENSHBUG00000013269	-	50	63.860	ENSNBRG00000003060	-	81	67.300	Neolamprologus_brichardi
ENSHBUG00000013269	-	81	54.128	ENSONIG00000004482	-	99	61.832	Oreochromis_niloticus
ENSHBUG00000013269	-	66	58.427	ENSONIG00000000314	-	97	58.221	Oreochromis_niloticus
ENSHBUG00000013269	-	76	54.795	ENSONIG00000013863	-	98	55.159	Oreochromis_niloticus
ENSHBUG00000013269	-	76	58.674	ENSONIG00000000233	-	93	59.481	Oreochromis_niloticus
ENSHBUG00000013269	-	63	63.146	ENSONIG00000012315	-	96	63.270	Oreochromis_niloticus
ENSHBUG00000013269	-	77	55.598	ENSONIG00000011313	-	98	55.070	Oreochromis_niloticus
ENSHBUG00000013269	-	81	52.110	ENSONIG00000010736	-	94	51.376	Oreochromis_niloticus
ENSHBUG00000013269	-	54	63.174	ENSONIG00000014210	-	80	75.463	Oreochromis_niloticus
ENSHBUG00000013269	-	89	49.042	ENSORLG00000017091	-	86	52.061	Oryzias_latipes
ENSHBUG00000013269	-	86	45.361	ENSORLG00000030459	-	87	45.876	Oryzias_latipes
ENSHBUG00000013269	-	56	58.311	ENSORLG00000025924	si:ch211-229i14.2	92	50.234	Oryzias_latipes
ENSHBUG00000013269	-	87	44.407	ENSORLG00020014225	-	86	44.202	Oryzias_latipes_hni
ENSHBUG00000013269	-	89	49.042	ENSORLG00020016100	-	86	51.627	Oryzias_latipes_hni
ENSHBUG00000013269	-	68	54.825	ENSORLG00015004505	-	87	50.470	Oryzias_latipes_hsok
ENSHBUG00000013269	-	50	54.448	ENSORLG00015004298	-	54	54.448	Oryzias_latipes_hsok
ENSHBUG00000013269	-	88	49.808	ENSORLG00015006787	-	86	52.505	Oryzias_latipes_hsok
ENSHBUG00000013269	-	93	49.684	ENSOMEG00000007494	-	80	56.522	Oryzias_melastigma
ENSHBUG00000013269	-	76	57.059	ENSOMEG00000013595	-	82	59.900	Oryzias_melastigma
ENSHBUG00000013269	-	89	45.771	ENSOMEG00000009393	-	89	47.119	Oryzias_melastigma
ENSHBUG00000013269	-	94	49.162	ENSOMEG00000003632	-	97	45.286	Oryzias_melastigma
ENSHBUG00000013269	-	76	60.373	ENSPFOG00000022293	-	94	63.869	Poecilia_formosa
ENSHBUG00000013269	-	87	44.737	ENSPFOG00000000973	-	98	37.572	Poecilia_formosa
ENSHBUG00000013269	-	52	50.568	ENSPFOG00000000217	-	88	65.550	Poecilia_formosa
ENSHBUG00000013269	-	78	47.619	ENSPFOG00000001388	-	94	48.606	Poecilia_formosa
ENSHBUG00000013269	-	89	50.493	ENSPFOG00000024835	-	96	46.104	Poecilia_formosa
ENSHBUG00000013269	-	88	47.288	ENSPLAG00000015541	-	99	45.794	Poecilia_latipinna
ENSHBUG00000013269	-	80	60.754	ENSPMEG00000008599	-	97	59.075	Poecilia_mexicana
ENSHBUG00000013269	-	87	44.444	ENSPMEG00000010900	-	94	40.278	Poecilia_mexicana
ENSHBUG00000013269	-	86	53.704	ENSPMEG00000002123	-	89	52.313	Poecilia_mexicana
ENSHBUG00000013269	-	54	56.233	ENSPMEG00000009705	-	93	65.343	Poecilia_mexicana
ENSHBUG00000013269	-	88	47.288	ENSPMEG00000003917	-	98	46.034	Poecilia_mexicana
ENSHBUG00000013269	-	88	49.408	ENSPREG00000017114	-	98	46.967	Poecilia_reticulata
ENSHBUG00000013269	-	87	62.396	ENSPREG00000017086	-	69	62.396	Poecilia_reticulata
ENSHBUG00000013269	-	80	58.352	ENSPREG00000017000	-	90	62.806	Poecilia_reticulata
ENSHBUG00000013269	-	61	55.394	ENSPREG00000006470	-	94	51.531	Poecilia_reticulata
ENSHBUG00000013269	-	65	59.404	ENSPNYG00000004195	-	76	65.017	Pundamilia_nyererei
ENSHBUG00000013269	-	66	57.428	ENSPNYG00000003568	-	97	56.133	Pundamilia_nyererei
ENSHBUG00000013269	-	56	49.367	ENSPNYG00000008507	-	74	51.319	Pundamilia_nyererei
ENSHBUG00000013269	-	55	49.206	ENSPNYG00000008579	-	80	51.264	Pundamilia_nyererei
ENSHBUG00000013269	-	86	52.664	ENSPNYG00000008570	-	84	52.643	Pundamilia_nyererei
ENSHBUG00000013269	-	92	45.558	ENSPNYG00000008493	-	84	49.565	Pundamilia_nyererei
ENSHBUG00000013269	-	88	68.439	ENSPNYG00000000712	-	97	68.624	Pundamilia_nyererei
ENSHBUG00000013269	-	90	51.797	ENSPNYG00000006913	-	86	55.036	Pundamilia_nyererei
ENSHBUG00000013269	-	61	43.353	ENSPNAG00000026011	-	80	37.546	Pygocentrus_nattereri
ENSHBUG00000013269	-	76	37.711	ENSPNAG00000003364	si:ch211-229i14.2	79	38.772	Pygocentrus_nattereri
ENSHBUG00000013269	-	51	49.118	ENSSDUG00000021006	-	92	56.744	Seriola_dumerili
ENSHBUG00000013269	-	66	61.497	ENSSDUG00000009253	-	99	61.075	Seriola_dumerili
ENSHBUG00000013269	-	98	59.818	ENSSDUG00000016624	-	84	58.333	Seriola_dumerili
ENSHBUG00000013269	-	92	48.577	ENSSDUG00000016851	-	86	50.418	Seriola_dumerili
ENSHBUG00000013269	-	82	65.435	ENSSDUG00000005270	-	85	65.435	Seriola_dumerili
ENSHBUG00000013269	-	73	47.870	ENSSDUG00000005095	-	89	48.269	Seriola_dumerili
ENSHBUG00000013269	-	56	80.556	ENSSLDG00000007022	-	82	80.556	Seriola_lalandi_dorsalis
ENSHBUG00000013269	-	81	52.527	ENSSLDG00000001533	-	75	64.151	Seriola_lalandi_dorsalis
ENSHBUG00000013269	-	55	55.645	ENSSLDG00000002339	-	92	62.724	Seriola_lalandi_dorsalis
ENSHBUG00000013269	-	59	52.096	ENSSLDG00000013126	-	94	52.212	Seriola_lalandi_dorsalis
ENSHBUG00000013269	-	83	68.308	ENSSPAG00000005977	-	95	68.522	Stegastes_partitus
ENSHBUG00000013269	-	99	44.366	ENSSPAG00000001386	-	97	40.264	Stegastes_partitus
ENSHBUG00000013269	-	92	40.977	ENSTRUG00000020623	-	86	41.273	Takifugu_rubripes
ENSHBUG00000013269	-	91	38.269	ENSTRUG00000025882	-	71	36.101	Takifugu_rubripes
ENSHBUG00000013269	-	90	57.451	ENSXMAG00000027923	-	94	53.150	Xiphophorus_maculatus
ENSHBUG00000013269	-	100	38.440	ENSXMAG00000019889	-	96	38.687	Xiphophorus_maculatus