EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000013322 (Gene tree)
Gene ID: 102308447
Gene Symbol: rad18
Alias: zgc:55577
Full Name: RAD18%2C E3 ubiquitin protein ligase
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 28081 bases
Position: chrJH425625.1:238927-267007
Accession: 102308447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011600	SAP	PF02037.27	9.2e-09	1	1
ENSHBUP00000029081	SAP	PF02037.27	1.3e-08	1	1
ENSHBUP00000029067	SAP	PF02037.27	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000018850	-	1362	XM_005941091	ENSHBUP00000029081	453 (aa)	XP_005941153	UPI0003BCB8B1
ENSHBUT00000018814	-	1577	-	ENSHBUP00000029067	428 (aa)	-	-
ENSHBUT00000018928	-	1071	XM_005941092	ENSHBUP00000011600	356 (aa)	XP_005941154	-

Gene Model

Click here to download ENSHBUG00000013322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013322	rad18	81	46.082	ENSG00000070950	RAD18	83	44.867	Homo_sapiens
ENSHBUG00000013322	rad18	99	70.153	ENSAPOG00000005260	rad18	89	70.153	Acanthochromis_polyacanthus
ENSHBUG00000013322	rad18	77	44.884	ENSAMEG00000012375	RAD18	53	44.884	Ailuropoda_melanoleuca
ENSHBUG00000013322	rad18	71	80.606	ENSACIG00000020655	rad18	77	80.606	Amphilophus_citrinellus
ENSHBUG00000013322	rad18	99	71.429	ENSAOCG00000004507	rad18	91	71.429	Amphiprion_ocellaris
ENSHBUG00000013322	rad18	99	70.779	ENSAPEG00000016837	rad18	100	62.108	Amphiprion_percula
ENSHBUG00000013322	rad18	85	45.087	ENSAPLG00000003138	RAD18	71	45.087	Anas_platyrhynchos
ENSHBUG00000013322	rad18	81	46.417	ENSANAG00000033360	RAD18	65	46.417	Aotus_nancymaae
ENSHBUG00000013322	rad18	100	98.598	ENSACLG00000023506	rad18	91	98.444	Astatotilapia_calliptera
ENSHBUG00000013322	rad18	100	47.166	ENSAMXG00000002534	rad18	98	48.706	Astyanax_mexicanus
ENSHBUG00000013322	rad18	97	38.312	ENSBTAG00000012142	RAD18	73	43.243	Bos_taurus
ENSHBUG00000013322	rad18	88	44.970	ENSCJAG00000040303	RAD18	71	44.970	Callithrix_jacchus
ENSHBUG00000013322	rad18	81	45.048	ENSCAFG00000005548	RAD18	62	45.048	Canis_familiaris
ENSHBUG00000013322	rad18	81	45.048	ENSCAFG00020009228	RAD18	62	45.048	Canis_lupus_dingo
ENSHBUG00000013322	rad18	81	44.000	ENSCHIG00000007965	RAD18	84	44.361	Capra_hircus
ENSHBUG00000013322	rad18	81	42.173	ENSTSYG00000012189	RAD18	63	44.089	Carlito_syrichta
ENSHBUG00000013322	rad18	90	37.892	ENSCAPG00000000356	RAD18	70	41.158	Cavia_aperea
ENSHBUG00000013322	rad18	81	43.887	ENSCPOG00000013890	RAD18	63	43.887	Cavia_porcellus
ENSHBUG00000013322	rad18	81	45.938	ENSCCAG00000022920	RAD18	63	45.938	Cebus_capucinus
ENSHBUG00000013322	rad18	81	46.965	ENSCATG00000039277	RAD18	65	46.965	Cercocebus_atys
ENSHBUG00000013322	rad18	83	44.062	ENSCLAG00000003652	RAD18	65	44.062	Chinchilla_lanigera
ENSHBUG00000013322	rad18	81	45.625	ENSCSAG00000010783	RAD18	62	45.625	Chlorocebus_sabaeus
ENSHBUG00000013322	rad18	84	43.976	ENSCPBG00000014787	RAD18	71	43.976	Chrysemys_picta_bellii
ENSHBUG00000013322	rad18	81	47.812	ENSCANG00000007308	RAD18	63	47.335	Colobus_angolensis_palliatus
ENSHBUG00000013322	rad18	81	46.965	ENSCGRG00001018154	-	69	46.452	Cricetulus_griseus_chok1gshd
ENSHBUG00000013322	rad18	82	45.768	ENSCGRG00001010209	-	64	45.768	Cricetulus_griseus_chok1gshd
ENSHBUG00000013322	rad18	81	46.965	ENSCGRG00000007283	-	69	46.452	Cricetulus_griseus_crigri
ENSHBUG00000013322	rad18	82	45.768	ENSCGRG00000019636	-	64	45.768	Cricetulus_griseus_crigri
ENSHBUG00000013322	rad18	100	59.406	ENSCSEG00000002516	rad18	94	59.406	Cynoglossus_semilaevis
ENSHBUG00000013322	rad18	90	53.151	ENSDARG00000027938	rad18	98	50.476	Danio_rerio
ENSHBUG00000013322	rad18	81	45.192	ENSDNOG00000040055	RAD18	62	45.192	Dasypus_novemcinctus
ENSHBUG00000013322	rad18	81	43.344	ENSDORG00000001099	Rad18	66	44.951	Dipodomys_ordii
ENSHBUG00000013322	rad18	75	42.808	ENSETEG00000002268	RAD18	66	42.808	Echinops_telfairi
ENSHBUG00000013322	rad18	89	44.444	ENSEASG00005013316	RAD18	63	44.444	Equus_asinus_asinus
ENSHBUG00000013322	rad18	89	44.444	ENSECAG00000010746	RAD18	65	44.444	Equus_caballus
ENSHBUG00000013322	rad18	69	42.007	ENSEEUG00000000236	-	61	42.007	Erinaceus_europaeus
ENSHBUG00000013322	rad18	99	50.313	ENSELUG00000000733	rad18	91	49.896	Esox_lucius
ENSHBUG00000013322	rad18	87	43.658	ENSFCAG00000025747	RAD18	67	43.658	Felis_catus
ENSHBUG00000013322	rad18	82	45.048	ENSFALG00000013625	RAD18	80	41.732	Ficedula_albicollis
ENSHBUG00000013322	rad18	82	44.136	ENSFDAG00000009907	RAD18	74	37.688	Fukomys_damarensis
ENSHBUG00000013322	rad18	82	43.902	ENSGALG00000008368	RAD18	66	43.844	Gallus_gallus
ENSHBUG00000013322	rad18	94	63.684	ENSGACG00000000920	rad18	98	58.933	Gasterosteus_aculeatus
ENSHBUG00000013322	rad18	84	43.675	ENSGAGG00000005184	RAD18	77	42.368	Gopherus_agassizii
ENSHBUG00000013322	rad18	81	46.395	ENSGGOG00000008391	RAD18	63	46.395	Gorilla_gorilla
ENSHBUG00000013322	rad18	65	44.697	ENSHGLG00000009196	-	83	44.697	Heterocephalus_glaber_female
ENSHBUG00000013322	rad18	65	44.697	ENSHGLG00100017675	-	83	44.697	Heterocephalus_glaber_male
ENSHBUG00000013322	rad18	100	48.478	ENSIPUG00000018681	rad18	97	48.478	Ictalurus_punctatus
ENSHBUG00000013322	rad18	64	47.619	ENSSTOG00000004870	-	81	47.619	Ictidomys_tridecemlineatus
ENSHBUG00000013322	rad18	80	46.815	ENSJJAG00000001484	Rad18	69	46.815	Jaculus_jaculus
ENSHBUG00000013322	rad18	99	66.304	ENSKMAG00000020725	rad18	91	66.304	Kryptolebias_marmoratus
ENSHBUG00000013322	rad18	64	46.097	ENSLACG00000018437	RAD18	85	43.750	Latimeria_chalumnae
ENSHBUG00000013322	rad18	94	50.131	ENSLOCG00000010629	rad18	97	46.682	Lepisosteus_oculatus
ENSHBUG00000013322	rad18	81	45.603	ENSLAFG00000004667	RAD18	64	45.603	Loxodonta_africana
ENSHBUG00000013322	rad18	81	47.284	ENSMFAG00000028864	RAD18	63	47.284	Macaca_fascicularis
ENSHBUG00000013322	rad18	81	47.284	ENSMMUG00000020013	RAD18	83	46.693	Macaca_mulatta
ENSHBUG00000013322	rad18	81	47.284	ENSMNEG00000013464	RAD18	63	47.284	Macaca_nemestrina
ENSHBUG00000013322	rad18	81	47.284	ENSMLEG00000014306	RAD18	63	47.284	Mandrillus_leucophaeus
ENSHBUG00000013322	rad18	99	66.167	ENSMAMG00000023936	rad18	99	66.167	Mastacembelus_armatus
ENSHBUG00000013322	rad18	100	98.364	ENSMZEG00005010577	rad18	85	98.222	Maylandia_zebra
ENSHBUG00000013322	rad18	82	44.308	ENSMGAG00000010131	RAD18	68	44.308	Meleagris_gallopavo
ENSHBUG00000013322	rad18	80	47.097	ENSMAUG00000020642	Rad18	69	47.097	Mesocricetus_auratus
ENSHBUG00000013322	rad18	87	41.667	ENSMICG00000013536	RAD18	70	43.768	Microcebus_murinus
ENSHBUG00000013322	rad18	81	48.254	ENSMOCG00000009114	Rad18	69	47.855	Microtus_ochrogaster
ENSHBUG00000013322	rad18	82	58.266	ENSMMOG00000021793	rad18	97	58.266	Mola_mola
ENSHBUG00000013322	rad18	84	45.075	ENSMODG00000004679	RAD18	64	45.373	Monodelphis_domestica
ENSHBUG00000013322	rad18	83	45.399	MGP_CAROLIEiJ_G0028712	Rad18	84	44.867	Mus_caroli
ENSHBUG00000013322	rad18	83	46.729	ENSMUSG00000030254	Rad18	83	46.124	Mus_musculus
ENSHBUG00000013322	rad18	83	47.352	MGP_PahariEiJ_G0022463	Rad18	83	46.899	Mus_pahari
ENSHBUG00000013322	rad18	83	47.040	MGP_SPRETEiJ_G0029740	Rad18	83	46.512	Mus_spretus
ENSHBUG00000013322	rad18	81	45.687	ENSMPUG00000017063	RAD18	62	45.687	Mustela_putorius_furo
ENSHBUG00000013322	rad18	81	42.593	ENSMLUG00000016494	RAD18	62	44.201	Myotis_lucifugus
ENSHBUG00000013322	rad18	77	47.000	ENSNGAG00000012464	Rad18	70	47.000	Nannospalax_galili
ENSHBUG00000013322	rad18	64	96.350	ENSNBRG00000004794	rad18	79	96.350	Neolamprologus_brichardi
ENSHBUG00000013322	rad18	81	46.395	ENSNLEG00000003789	RAD18	63	46.395	Nomascus_leucogenys
ENSHBUG00000013322	rad18	64	47.619	ENSMEUG00000003444	-	61	47.619	Notamacropus_eugenii
ENSHBUG00000013322	rad18	81	44.620	ENSOPRG00000013856	RAD18	64	45.714	Ochotona_princeps
ENSHBUG00000013322	rad18	64	44.706	ENSODEG00000018158	RAD18	82	44.706	Octodon_degus
ENSHBUG00000013322	rad18	100	78.774	ENSONIG00000018979	rad18	98	78.774	Oreochromis_niloticus
ENSHBUG00000013322	rad18	81	45.253	ENSOCUG00000000013	RAD18	62	45.253	Oryctolagus_cuniculus
ENSHBUG00000013322	rad18	83	54.972	ENSORLG00000029026	rad18	96	54.972	Oryzias_latipes
ENSHBUG00000013322	rad18	81	45.886	ENSOGAG00000001410	RAD18	63	45.886	Otolemur_garnettii
ENSHBUG00000013322	rad18	81	42.947	ENSOARG00000007445	RAD18	62	43.396	Ovis_aries
ENSHBUG00000013322	rad18	81	46.395	ENSPPAG00000035797	RAD18	63	46.395	Pan_paniscus
ENSHBUG00000013322	rad18	87	43.620	ENSPPRG00000004021	RAD18	67	44.248	Panthera_pardus
ENSHBUG00000013322	rad18	87	43.620	ENSPTIG00000008602	RAD18	67	43.620	Panthera_tigris_altaica
ENSHBUG00000013322	rad18	81	46.395	ENSPTRG00000014583	RAD18	63	46.395	Pan_troglodytes
ENSHBUG00000013322	rad18	81	46.729	ENSPANG00000008855	RAD18	63	46.729	Papio_anubis
ENSHBUG00000013322	rad18	84	43.505	ENSPSIG00000006928	RAD18	70	41.667	Pelodiscus_sinensis
ENSHBUG00000013322	rad18	77	55.108	ENSPMGG00000013294	rad18	94	55.108	Periophthalmus_magnuspinnatus
ENSHBUG00000013322	rad18	90	45.954	ENSPEMG00000022129	Rad18	69	47.419	Peromyscus_maniculatus_bairdii
ENSHBUG00000013322	rad18	85	45.000	ENSPCIG00000024872	RAD18	72	45.000	Phascolarctos_cinereus
ENSHBUG00000013322	rad18	83	59.016	ENSPFOG00000002722	rad18	98	59.016	Poecilia_formosa
ENSHBUG00000013322	rad18	81	46.875	ENSPPYG00000013688	RAD18	63	46.395	Pongo_abelii
ENSHBUG00000013322	rad18	62	41.912	ENSPCAG00000008229	RAD18	50	41.912	Procavia_capensis
ENSHBUG00000013322	rad18	81	42.857	ENSPVAG00000012220	RAD18	63	45.367	Pteropus_vampyrus
ENSHBUG00000013322	rad18	100	99.299	ENSPNYG00000006815	rad18	91	99.111	Pundamilia_nyererei
ENSHBUG00000013322	rad18	100	50.113	ENSPNAG00000016082	rad18	98	50.113	Pygocentrus_nattereri
ENSHBUG00000013322	rad18	81	46.894	ENSRNOG00000005907	Rad18	65	47.516	Rattus_norvegicus
ENSHBUG00000013322	rad18	81	45.031	ENSRBIG00000044173	RAD18	63	44.720	Rhinopithecus_bieti
ENSHBUG00000013322	rad18	81	46.729	ENSRROG00000043948	RAD18	64	46.729	Rhinopithecus_roxellana
ENSHBUG00000013322	rad18	82	46.012	ENSSBOG00000008434	-	64	46.012	Saimiri_boliviensis_boliviensis
ENSHBUG00000013322	rad18	85	42.136	ENSSHAG00000012472	-	83	42.136	Sarcophilus_harrisii
ENSHBUG00000013322	rad18	99	47.899	ENSSFOG00015019264	rad18	91	48.008	Scleropages_formosus
ENSHBUG00000013322	rad18	64	43.295	ENSSPUG00000017486	RAD18	83	43.295	Sphenodon_punctatus
ENSHBUG00000013322	rad18	99	70.000	ENSSPAG00000007165	rad18	91	70.435	Stegastes_partitus
ENSHBUG00000013322	rad18	82	42.553	ENSSSCG00000026158	RAD18	63	44.377	Sus_scrofa
ENSHBUG00000013322	rad18	81	42.553	ENSTGUG00000010405	RAD18	72	43.143	Taeniopygia_guttata
ENSHBUG00000013322	rad18	83	56.098	ENSTRUG00000003517	rad18	100	56.098	Takifugu_rubripes
ENSHBUG00000013322	rad18	87	65.057	ENSTNIG00000014625	rad18	100	65.057	Tetraodon_nigroviridis
ENSHBUG00000013322	rad18	81	43.450	ENSTTRG00000005034	RAD18	63	43.450	Tursiops_truncatus
ENSHBUG00000013322	rad18	81	44.728	ENSUMAG00000019279	RAD18	62	44.728	Ursus_maritimus
ENSHBUG00000013322	rad18	81	41.026	ENSVPAG00000002063	RAD18	68	41.667	Vicugna_pacos
ENSHBUG00000013322	rad18	96	36.404	ENSVVUG00000025318	RAD18	65	46.006	Vulpes_vulpes
ENSHBUG00000013322	rad18	82	41.975	ENSXETG00000033878	RAD18	86	42.727	Xenopus_tropicalis
ENSHBUG00000013322	rad18	83	55.432	ENSXCOG00000020018	rad18	95	55.432	Xiphophorus_couchianus
ENSHBUG00000013322	rad18	83	55.278	ENSXMAG00000001516	rad18	92	62.170	Xiphophorus_maculatus