EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000013406 (Gene tree)
Gene ID: 102314559
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 12649 bases
Position: chrJH425390.1:2189228-2201876
Accession: 102314559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000011742	Fox-1_C	PF12414.8	7.9e-33	1	1
ENSHBUP00000011742	RRM_1	PF00076.22	9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000032235	-	1486	XM_005925345	ENSHBUP00000011742	380 (aa)	XP_005925407	UPI000329A7BD

Gene Model

Click here to download ENSHBUG00000013406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000013406	rbfox1l	100	54.499	ENSHBUG00000018099	rbfox3b	61	73.333
ENSHBUG00000013406	rbfox1l	88	57.522	ENSHBUG00000023098	-	67	72.083
ENSHBUG00000013406	rbfox1l	63	62.548	ENSHBUG00000004356	rbfox2	60	62.791
ENSHBUG00000013406	rbfox1l	63	61.832	ENSHBUG00000000856	-	59	61.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013406	rbfox1l	97	89.218	ENSAPOG00000016304	rbfox1l	98	87.601	Acanthochromis_polyacanthus
ENSHBUG00000013406	rbfox1l	100	86.877	ENSACIG00000006441	rbfox1l	100	86.877	Amphilophus_citrinellus
ENSHBUG00000013406	rbfox1l	83	84.906	ENSAOCG00000020938	rbfox1l	94	82.812	Amphiprion_ocellaris
ENSHBUG00000013406	rbfox1l	100	89.556	ENSAPEG00000008232	rbfox1l	100	87.990	Amphiprion_percula
ENSHBUG00000013406	rbfox1l	100	85.640	ENSATEG00000022649	rbfox1l	100	85.640	Anabas_testudineus
ENSHBUG00000013406	rbfox1l	64	72.112	ENSACAG00000011931	-	89	73.577	Anolis_carolinensis
ENSHBUG00000013406	rbfox1l	100	100.000	ENSACLG00000021394	rbfox1l	100	100.000	Astatotilapia_calliptera
ENSHBUG00000013406	rbfox1l	100	85.233	ENSAMXG00000010470	rbfox1l	100	84.974	Astyanax_mexicanus
ENSHBUG00000013406	rbfox1l	100	54.061	ENSCPBG00000010944	-	100	55.725	Chrysemys_picta_bellii
ENSHBUG00000013406	rbfox1l	100	86.458	ENSCSEG00000018898	rbfox1l	100	86.719	Cynoglossus_semilaevis
ENSHBUG00000013406	rbfox1l	100	87.990	ENSCVAG00000007986	rbfox1l	100	86.945	Cyprinodon_variegatus
ENSHBUG00000013406	rbfox1l	100	83.420	ENSDARG00000021184	rbfox1l	100	83.679	Danio_rerio
ENSHBUG00000013406	rbfox1l	100	81.679	ENSELUG00000015077	rbfox1l	100	83.206	Esox_lucius
ENSHBUG00000013406	rbfox1l	79	85.366	ENSFHEG00000016557	rbfox1l	95	85.366	Fundulus_heteroclitus
ENSHBUG00000013406	rbfox1l	100	82.507	ENSGMOG00000005040	rbfox1l	100	82.507	Gadus_morhua
ENSHBUG00000013406	rbfox1l	92	87.853	ENSGAFG00000013211	rbfox1l	97	87.853	Gambusia_affinis
ENSHBUG00000013406	rbfox1l	100	87.990	ENSGACG00000010757	rbfox1l	100	87.990	Gasterosteus_aculeatus
ENSHBUG00000013406	rbfox1l	65	68.254	ENSGAGG00000012440	-	84	72.016	Gopherus_agassizii
ENSHBUG00000013406	rbfox1l	100	84.115	ENSHCOG00000020771	rbfox1l	100	84.375	Hippocampus_comes
ENSHBUG00000013406	rbfox1l	99	77.105	ENSIPUG00000000065	rbfox1l	99	78.371	Ictalurus_punctatus
ENSHBUG00000013406	rbfox1l	100	87.273	ENSKMAG00000005146	rbfox1l	100	87.532	Kryptolebias_marmoratus
ENSHBUG00000013406	rbfox1l	100	90.339	ENSLBEG00000017089	rbfox1l	100	90.339	Labrus_bergylta
ENSHBUG00000013406	rbfox1l	100	90.078	ENSMAMG00000019480	rbfox1l	100	90.078	Mastacembelus_armatus
ENSHBUG00000013406	rbfox1l	100	100.000	ENSMZEG00005016374	rbfox1l	100	100.000	Maylandia_zebra
ENSHBUG00000013406	rbfox1l	100	88.512	ENSMMOG00000016530	rbfox1l	100	88.512	Mola_mola
ENSHBUG00000013406	rbfox1l	100	85.640	ENSMALG00000009384	rbfox1l	100	85.640	Monopterus_albus
ENSHBUG00000013406	rbfox1l	100	98.421	ENSNBRG00000003346	rbfox1l	100	98.421	Neolamprologus_brichardi
ENSHBUG00000013406	rbfox1l	100	99.211	ENSONIG00000012754	rbfox1l	100	99.211	Oreochromis_niloticus
ENSHBUG00000013406	rbfox1l	100	87.467	ENSORLG00000011269	rbfox1l	100	85.901	Oryzias_latipes
ENSHBUG00000013406	rbfox1l	100	88.251	ENSORLG00020000162	rbfox1l	100	86.684	Oryzias_latipes_hni
ENSHBUG00000013406	rbfox1l	100	88.251	ENSORLG00015013464	rbfox1l	100	86.684	Oryzias_latipes_hsok
ENSHBUG00000013406	rbfox1l	100	88.773	ENSOMEG00000010584	rbfox1l	100	87.206	Oryzias_melastigma
ENSHBUG00000013406	rbfox1l	100	86.458	ENSPKIG00000012029	rbfox1l	100	86.458	Paramormyrops_kingsleyae
ENSHBUG00000013406	rbfox1l	100	80.208	ENSPMGG00000012082	rbfox1l	100	79.688	Periophthalmus_magnuspinnatus
ENSHBUG00000013406	rbfox1l	100	88.512	ENSPFOG00000009338	rbfox1l	100	88.512	Poecilia_formosa
ENSHBUG00000013406	rbfox1l	85	79.817	ENSPLAG00000012816	rbfox1l	99	79.817	Poecilia_latipinna
ENSHBUG00000013406	rbfox1l	100	84.595	ENSPMEG00000017597	rbfox1l	100	84.595	Poecilia_mexicana
ENSHBUG00000013406	rbfox1l	100	84.595	ENSPREG00000007940	rbfox1l	100	84.595	Poecilia_reticulata
ENSHBUG00000013406	rbfox1l	100	99.211	ENSPNYG00000002098	rbfox1l	100	99.211	Pundamilia_nyererei
ENSHBUG00000013406	rbfox1l	100	84.755	ENSPNAG00000001620	rbfox1l	100	84.238	Pygocentrus_nattereri
ENSHBUG00000013406	rbfox1l	100	82.597	ENSSFOG00015000675	rbfox1l	100	82.857	Scleropages_formosus
ENSHBUG00000013406	rbfox1l	100	87.728	ENSSMAG00000013090	rbfox1l	100	87.728	Scophthalmus_maximus
ENSHBUG00000013406	rbfox1l	100	87.147	ENSSDUG00000008705	rbfox1l	100	86.889	Seriola_dumerili
ENSHBUG00000013406	rbfox1l	100	87.371	ENSSLDG00000022256	rbfox1l	100	87.113	Seriola_lalandi_dorsalis
ENSHBUG00000013406	rbfox1l	100	90.339	ENSSPAG00000016620	rbfox1l	100	88.773	Stegastes_partitus
ENSHBUG00000013406	rbfox1l	96	83.784	ENSTRUG00000015905	rbfox1l	100	84.054	Takifugu_rubripes
ENSHBUG00000013406	rbfox1l	64	80.297	ENSTNIG00000008088	rbfox1l	97	82.443	Tetraodon_nigroviridis
ENSHBUG00000013406	rbfox1l	100	88.512	ENSXMAG00000023471	rbfox1l	100	88.512	Xiphophorus_maculatus