EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000013619 (Gene tree)
Gene ID: 102309529
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 12778 bases
Position: chrJH425429.1:315027-327804
Accession: 102309529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000029291	tRNA_anti-codon	PF01336.25	2.2e-13	1	1
ENSHBUP00000029286	tRNA_anti-codon	PF01336.25	2.4e-13	1	1
ENSHBUP00000029291	tRNA-synt_2	PF00152.20	3.5e-78	1	1
ENSHBUP00000029286	tRNA-synt_2	PF00152.20	3.7e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000019256	-	2263	XM_005929543	ENSHBUP00000029291	588 (aa)	XP_005929605	UPI0003AF3769
ENSHBUT00000032316	-	2342	XM_005929542	ENSHBUP00000029286	605 (aa)	XP_005929604	UPI0003297666

Gene Model

Click here to download ENSHBUG00000013619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013619	kars	97	79.281	ENSG00000065427	KARS	100	89.216	Homo_sapiens
ENSHBUG00000013619	kars	100	91.639	ENSAPOG00000010997	kars	100	90.984	Acanthochromis_polyacanthus
ENSHBUG00000013619	kars	99	75.614	ENSAMEG00000005347	KARS	97	75.862	Ailuropoda_melanoleuca
ENSHBUG00000013619	kars	100	90.625	ENSACIG00000000304	kars	100	91.146	Amphilophus_citrinellus
ENSHBUG00000013619	kars	97	92.712	ENSAOCG00000012971	kars	98	92.712	Amphiprion_ocellaris
ENSHBUG00000013619	kars	100	93.115	ENSAPEG00000011144	kars	100	93.426	Amphiprion_percula
ENSHBUG00000013619	kars	100	91.148	ENSATEG00000004954	kars	100	91.522	Anabas_testudineus
ENSHBUG00000013619	kars	91	81.970	ENSAPLG00000012705	KARS	99	80.435	Anas_platyrhynchos
ENSHBUG00000013619	kars	96	78.671	ENSACAG00000007577	KARS	93	77.104	Anolis_carolinensis
ENSHBUG00000013619	kars	95	66.491	ENSANAG00000031739	-	92	66.608	Aotus_nancymaae
ENSHBUG00000013619	kars	96	81.185	ENSANAG00000030403	-	96	81.185	Aotus_nancymaae
ENSHBUG00000013619	kars	100	100.000	ENSACLG00000001613	kars	100	100.000	Astatotilapia_calliptera
ENSHBUG00000013619	kars	98	91.869	ENSAMXG00000030719	kars	100	91.869	Astyanax_mexicanus
ENSHBUG00000013619	kars	98	79.422	ENSBTAG00000015677	KARS	76	77.891	Bos_taurus
ENSHBUG00000013619	kars	94	60.901	WBGene00002238	kars-1	97	64.000	Caenorhabditis_elegans
ENSHBUG00000013619	kars	97	79.796	ENSCJAG00000014213	KARS	98	80.239	Callithrix_jacchus
ENSHBUG00000013619	kars	99	76.998	ENSCAFG00000020069	KARS	97	77.176	Canis_familiaris
ENSHBUG00000013619	kars	97	79.658	ENSCAFG00020001721	KARS	97	79.862	Canis_lupus_dingo
ENSHBUG00000013619	kars	96	81.261	ENSCHIG00000014108	-	96	79.685	Capra_hircus
ENSHBUG00000013619	kars	94	80.000	ENSCHIG00000016073	-	88	80.603	Capra_hircus
ENSHBUG00000013619	kars	97	81.533	ENSTSYG00000001643	KARS	97	81.705	Carlito_syrichta
ENSHBUG00000013619	kars	98	72.635	ENSCAPG00000016234	KARS	96	73.905	Cavia_aperea
ENSHBUG00000013619	kars	98	80.375	ENSCPOG00000012036	KARS	98	80.034	Cavia_porcellus
ENSHBUG00000013619	kars	91	65.265	ENSCCAG00000030337	-	99	65.265	Cebus_capucinus
ENSHBUG00000013619	kars	97	79.966	ENSCCAG00000034307	-	96	81.185	Cebus_capucinus
ENSHBUG00000013619	kars	96	79.791	ENSCATG00000038129	KARS	96	79.049	Cercocebus_atys
ENSHBUG00000013619	kars	96	80.105	ENSCLAG00000007905	KARS	96	80.105	Chinchilla_lanigera
ENSHBUG00000013619	kars	99	75.698	ENSCSAG00000003664	KARS	97	75.698	Chlorocebus_sabaeus
ENSHBUG00000013619	kars	78	84.902	ENSCHOG00000013447	KARS	73	84.902	Choloepus_hoffmanni
ENSHBUG00000013619	kars	96	81.850	ENSCPBG00000026969	KARS	97	81.501	Chrysemys_picta_bellii
ENSHBUG00000013619	kars	90	72.830	ENSCPBG00000002553	-	96	72.830	Chrysemys_picta_bellii
ENSHBUG00000013619	kars	96	67.553	ENSCING00000009513	-	98	67.553	Ciona_intestinalis
ENSHBUG00000013619	kars	96	69.014	ENSCSAVG00000007684	-	99	68.893	Ciona_savignyi
ENSHBUG00000013619	kars	54	71.787	ENSCSAVG00000001136	-	100	72.797	Ciona_savignyi
ENSHBUG00000013619	kars	96	75.958	ENSCANG00000032813	KARS	96	75.958	Colobus_angolensis_palliatus
ENSHBUG00000013619	kars	98	79.117	ENSCGRG00001004055	KARS	96	80.969	Cricetulus_griseus_chok1gshd
ENSHBUG00000013619	kars	98	79.117	ENSCGRG00000014242	KARS	96	80.969	Cricetulus_griseus_crigri
ENSHBUG00000013619	kars	98	93.056	ENSCSEG00000008324	kars	99	93.056	Cynoglossus_semilaevis
ENSHBUG00000013619	kars	99	92.359	ENSCVAG00000019686	kars	99	92.982	Cyprinodon_variegatus
ENSHBUG00000013619	kars	98	90.830	ENSDARG00000103799	kars	99	92.233	Danio_rerio
ENSHBUG00000013619	kars	96	79.514	ENSDNOG00000002241	KARS	97	76.847	Dasypus_novemcinctus
ENSHBUG00000013619	kars	94	62.703	ENSDORG00000024214	-	96	62.724	Dipodomys_ordii
ENSHBUG00000013619	kars	98	78.983	ENSDORG00000004780	-	99	78.983	Dipodomys_ordii
ENSHBUG00000013619	kars	97	70.280	FBgn0027084	LysRS	99	71.127	Drosophila_melanogaster
ENSHBUG00000013619	kars	99	77.340	ENSETEG00000008353	KARS	97	77.340	Echinops_telfairi
ENSHBUG00000013619	kars	95	72.352	ENSEBUG00000001284	-	95	72.383	Eptatretus_burgeri
ENSHBUG00000013619	kars	96	81.119	ENSEASG00005013497	KARS	96	80.944	Equus_asinus_asinus
ENSHBUG00000013619	kars	96	81.119	ENSECAG00000013424	KARS	96	80.944	Equus_caballus
ENSHBUG00000013619	kars	98	71.833	ENSEEUG00000007042	KARS	97	70.984	Erinaceus_europaeus
ENSHBUG00000013619	kars	96	83.865	ENSELUG00000014575	kars	97	83.865	Esox_lucius
ENSHBUG00000013619	kars	97	79.793	ENSFCAG00000008573	KARS	97	79.588	Felis_catus
ENSHBUG00000013619	kars	98	79.074	ENSFALG00000002543	KARS	97	80.141	Ficedula_albicollis
ENSHBUG00000013619	kars	97	79.658	ENSFDAG00000007155	KARS	97	79.862	Fukomys_damarensis
ENSHBUG00000013619	kars	100	88.834	ENSFHEG00000006172	kars	100	89.255	Fundulus_heteroclitus
ENSHBUG00000013619	kars	100	87.602	ENSGMOG00000002633	kars	99	87.602	Gadus_morhua
ENSHBUG00000013619	kars	96	81.326	ENSGALG00000000907	KARS	99	81.228	Gallus_gallus
ENSHBUG00000013619	kars	99	90.954	ENSGAFG00000017252	kars	99	91.508	Gambusia_affinis
ENSHBUG00000013619	kars	100	90.212	ENSGACG00000015749	kars	100	90.212	Gasterosteus_aculeatus
ENSHBUG00000013619	kars	90	72.453	ENSGAGG00000011960	-	97	73.166	Gopherus_agassizii
ENSHBUG00000013619	kars	96	82.199	ENSGAGG00000023836	KARS	97	81.850	Gopherus_agassizii
ENSHBUG00000013619	kars	97	79.110	ENSGGOG00000005515	KARS	96	80.314	Gorilla_gorilla
ENSHBUG00000013619	kars	97	80.243	ENSHGLG00000011898	KARS	98	80.496	Heterocephalus_glaber_female
ENSHBUG00000013619	kars	97	71.649	ENSHGLG00000015235	-	97	72.069	Heterocephalus_glaber_female
ENSHBUG00000013619	kars	97	64.846	ENSHGLG00000001298	-	97	64.676	Heterocephalus_glaber_female
ENSHBUG00000013619	kars	97	71.478	ENSHGLG00100012523	-	91	78.306	Heterocephalus_glaber_male
ENSHBUG00000013619	kars	97	80.243	ENSHGLG00100012264	KARS	97	80.243	Heterocephalus_glaber_male
ENSHBUG00000013619	kars	97	64.676	ENSHGLG00100006466	-	97	64.505	Heterocephalus_glaber_male
ENSHBUG00000013619	kars	98	92.746	ENSHCOG00000002900	kars	97	92.746	Hippocampus_comes
ENSHBUG00000013619	kars	98	91.667	ENSIPUG00000009862	kars	100	91.667	Ictalurus_punctatus
ENSHBUG00000013619	kars	98	79.898	ENSSTOG00000004205	KARS	98	79.898	Ictidomys_tridecemlineatus
ENSHBUG00000013619	kars	98	79.931	ENSJJAG00000020406	Kars	98	80.103	Jaculus_jaculus
ENSHBUG00000013619	kars	100	91.311	ENSKMAG00000006434	kars	100	91.869	Kryptolebias_marmoratus
ENSHBUG00000013619	kars	100	92.787	ENSLBEG00000026537	kars	100	92.787	Labrus_bergylta
ENSHBUG00000013619	kars	86	76.877	ENSLACG00000016399	-	99	76.877	Latimeria_chalumnae
ENSHBUG00000013619	kars	99	81.154	ENSLACG00000006667	KARS	95	81.154	Latimeria_chalumnae
ENSHBUG00000013619	kars	89	71.702	ENSLOCG00000013608	-	95	71.702	Lepisosteus_oculatus
ENSHBUG00000013619	kars	98	88.985	ENSLOCG00000004002	kars	100	88.985	Lepisosteus_oculatus
ENSHBUG00000013619	kars	99	75.812	ENSLAFG00000015340	KARS	99	75.812	Loxodonta_africana
ENSHBUG00000013619	kars	96	79.617	ENSMFAG00000040024	KARS	96	78.448	Macaca_fascicularis
ENSHBUG00000013619	kars	85	77.059	ENSMNEG00000035832	-	98	75.775	Macaca_nemestrina
ENSHBUG00000013619	kars	96	79.617	ENSMNEG00000042879	-	96	78.448	Macaca_nemestrina
ENSHBUG00000013619	kars	96	79.617	ENSMLEG00000034947	KARS	96	79.617	Mandrillus_leucophaeus
ENSHBUG00000013619	kars	100	92.951	ENSMAMG00000021559	kars	100	92.951	Mastacembelus_armatus
ENSHBUG00000013619	kars	100	100.000	ENSMZEG00005014382	kars	100	100.000	Maylandia_zebra
ENSHBUG00000013619	kars	92	81.319	ENSMGAG00000009000	KARS	98	80.797	Meleagris_gallopavo
ENSHBUG00000013619	kars	98	80.068	ENSMICG00000011997	KARS	99	79.730	Microcebus_murinus
ENSHBUG00000013619	kars	96	78.596	ENSMOCG00000019029	-	96	78.246	Microtus_ochrogaster
ENSHBUG00000013619	kars	96	81.404	ENSMOCG00000011829	Kars	97	80.522	Microtus_ochrogaster
ENSHBUG00000013619	kars	95	93.416	ENSMMOG00000016934	kars	100	93.416	Mola_mola
ENSHBUG00000013619	kars	96	75.220	ENSMODG00000002238	-	92	75.395	Monodelphis_domestica
ENSHBUG00000013619	kars	95	78.622	ENSMODG00000002215	-	98	78.445	Monodelphis_domestica
ENSHBUG00000013619	kars	100	90.984	ENSMALG00000020858	kars	100	92.042	Monopterus_albus
ENSHBUG00000013619	kars	84	80.371	MGP_CAROLIEiJ_G0031588	Kars	96	80.371	Mus_caroli
ENSHBUG00000013619	kars	96	81.882	ENSMUSG00000031948	Kars	96	80.314	Mus_musculus
ENSHBUG00000013619	kars	96	81.533	MGP_PahariEiJ_G0023186	Kars	96	79.965	Mus_pahari
ENSHBUG00000013619	kars	96	81.707	MGP_SPRETEiJ_G0032706	Kars	96	80.139	Mus_spretus
ENSHBUG00000013619	kars	96	79.335	ENSMPUG00000009871	KARS	97	76.721	Mustela_putorius_furo
ENSHBUG00000013619	kars	97	80.069	ENSMLUG00000015119	-	98	80.069	Myotis_lucifugus
ENSHBUG00000013619	kars	78	53.067	ENSMLUG00000026871	-	76	53.067	Myotis_lucifugus
ENSHBUG00000013619	kars	97	80.000	ENSNGAG00000018820	-	98	79.658	Nannospalax_galili
ENSHBUG00000013619	kars	93	79.928	ENSNGAG00000022944	-	95	79.566	Nannospalax_galili
ENSHBUG00000013619	kars	100	99.490	ENSNBRG00000011098	kars	100	99.490	Neolamprologus_brichardi
ENSHBUG00000013619	kars	97	79.452	ENSNLEG00000013072	KARS	96	80.662	Nomascus_leucogenys
ENSHBUG00000013619	kars	99	72.757	ENSMEUG00000008684	KARS	98	72.757	Notamacropus_eugenii
ENSHBUG00000013619	kars	95	79.894	ENSOPRG00000012544	KARS	93	80.071	Ochotona_princeps
ENSHBUG00000013619	kars	97	80.243	ENSODEG00000013099	-	98	80.247	Octodon_degus
ENSHBUG00000013619	kars	95	57.576	ENSODEG00000009464	-	98	57.398	Octodon_degus
ENSHBUG00000013619	kars	98	99.136	ENSONIG00000005937	kars	100	99.136	Oreochromis_niloticus
ENSHBUG00000013619	kars	95	80.279	ENSOANG00000008179	KARS	97	79.930	Ornithorhynchus_anatinus
ENSHBUG00000013619	kars	97	74.527	ENSOCUG00000015553	KARS	97	74.527	Oryctolagus_cuniculus
ENSHBUG00000013619	kars	99	90.625	ENSORLG00000007627	kars	99	90.625	Oryzias_latipes
ENSHBUG00000013619	kars	99	90.461	ENSORLG00020010056	kars	99	90.461	Oryzias_latipes_hni
ENSHBUG00000013619	kars	99	90.461	ENSORLG00015008179	kars	99	90.461	Oryzias_latipes_hsok
ENSHBUG00000013619	kars	98	92.708	ENSOMEG00000001710	kars	99	92.708	Oryzias_melastigma
ENSHBUG00000013619	kars	99	71.014	ENSOGAG00000005903	KARS	97	71.686	Otolemur_garnettii
ENSHBUG00000013619	kars	91	80.074	ENSOARG00000006928	KARS	95	78.413	Ovis_aries
ENSHBUG00000013619	kars	97	78.938	ENSPPAG00000036192	KARS	96	80.139	Pan_paniscus
ENSHBUG00000013619	kars	97	79.965	ENSPPRG00000003027	KARS	97	79.725	Panthera_pardus
ENSHBUG00000013619	kars	97	79.793	ENSPTIG00000008011	KARS	97	79.553	Panthera_tigris_altaica
ENSHBUG00000013619	kars	97	79.110	ENSPTRG00000008364	KARS	96	80.314	Pan_troglodytes
ENSHBUG00000013619	kars	96	79.791	ENSPANG00000024106	KARS	97	75.698	Papio_anubis
ENSHBUG00000013619	kars	98	90.501	ENSPKIG00000009896	kars	100	90.501	Paramormyrops_kingsleyae
ENSHBUG00000013619	kars	87	74.854	ENSPSIG00000003041	-	94	74.854	Pelodiscus_sinensis
ENSHBUG00000013619	kars	95	81.071	ENSPSIG00000009294	KARS	96	81.607	Pelodiscus_sinensis
ENSHBUG00000013619	kars	95	93.571	ENSPMGG00000006117	kars	100	93.571	Periophthalmus_magnuspinnatus
ENSHBUG00000013619	kars	98	79.181	ENSPEMG00000012277	Kars	96	81.043	Peromyscus_maniculatus_bairdii
ENSHBUG00000013619	kars	95	76.021	ENSPMAG00000008360	-	93	74.483	Petromyzon_marinus
ENSHBUG00000013619	kars	96	76.678	ENSPCIG00000025469	-	99	73.115	Phascolarctos_cinereus
ENSHBUG00000013619	kars	97	80.000	ENSPCIG00000010761	-	97	79.655	Phascolarctos_cinereus
ENSHBUG00000013619	kars	99	91.297	ENSPFOG00000013253	kars	99	91.297	Poecilia_formosa
ENSHBUG00000013619	kars	99	91.626	ENSPLAG00000004189	kars	99	91.854	Poecilia_latipinna
ENSHBUG00000013619	kars	99	91.461	ENSPMEG00000015698	kars	99	91.681	Poecilia_mexicana
ENSHBUG00000013619	kars	99	91.612	ENSPREG00000023179	kars	99	92.188	Poecilia_reticulata
ENSHBUG00000013619	kars	99	75.777	ENSPPYG00000007567	KARS	97	76.026	Pongo_abelii
ENSHBUG00000013619	kars	87	75.244	ENSPCAG00000010790	KARS	98	75.244	Procavia_capensis
ENSHBUG00000013619	kars	97	74.132	ENSPCOG00000003166	KARS	86	84.881	Propithecus_coquereli
ENSHBUG00000013619	kars	98	79.145	ENSPVAG00000006746	KARS	97	76.835	Pteropus_vampyrus
ENSHBUG00000013619	kars	100	100.000	ENSPNYG00000013095	kars	100	100.000	Pundamilia_nyererei
ENSHBUG00000013619	kars	98	90.830	ENSPNAG00000013828	kars	100	90.830	Pygocentrus_nattereri
ENSHBUG00000013619	kars	98	78.305	ENSRNOG00000019456	Kars	97	76.471	Rattus_norvegicus
ENSHBUG00000013619	kars	96	79.443	ENSRBIG00000030118	KARS	96	78.697	Rhinopithecus_bieti
ENSHBUG00000013619	kars	96	78.559	ENSRROG00000041418	KARS	96	78.697	Rhinopithecus_roxellana
ENSHBUG00000013619	kars	76	34.526	YNL073W	-	82	34.526	Saccharomyces_cerevisiae
ENSHBUG00000013619	kars	94	57.117	YDR037W	KRS1	94	57.473	Saccharomyces_cerevisiae
ENSHBUG00000013619	kars	96	80.729	ENSSBOG00000019255	KARS	96	81.010	Saimiri_boliviensis_boliviensis
ENSHBUG00000013619	kars	94	68.909	ENSSHAG00000009005	-	96	70.019	Sarcophilus_harrisii
ENSHBUG00000013619	kars	95	74.603	ENSSHAG00000001359	-	98	74.603	Sarcophilus_harrisii
ENSHBUG00000013619	kars	99	63.350	ENSSHAG00000002050	-	95	63.350	Sarcophilus_harrisii
ENSHBUG00000013619	kars	95	91.398	ENSSFOG00015014837	kars	97	91.682	Scleropages_formosus
ENSHBUG00000013619	kars	100	93.115	ENSSMAG00000021441	kars	100	94.118	Scophthalmus_maximus
ENSHBUG00000013619	kars	100	94.426	ENSSDUG00000001202	kars	100	95.156	Seriola_dumerili
ENSHBUG00000013619	kars	96	95.035	ENSSLDG00000021220	kars	98	95.213	Seriola_lalandi_dorsalis
ENSHBUG00000013619	kars	75	80.299	ENSSARG00000011493	KARS	79	80.781	Sorex_araneus
ENSHBUG00000013619	kars	96	80.690	ENSSPUG00000004974	KARS	97	80.690	Sphenodon_punctatus
ENSHBUG00000013619	kars	64	66.043	ENSSPUG00000000449	-	84	67.769	Sphenodon_punctatus
ENSHBUG00000013619	kars	100	93.443	ENSSPAG00000020365	kars	97	94.316	Stegastes_partitus
ENSHBUG00000013619	kars	98	80.000	ENSSSCG00000002704	KARS	97	80.274	Sus_scrofa
ENSHBUG00000013619	kars	95	80.536	ENSTGUG00000008400	KARS	100	80.536	Taeniopygia_guttata
ENSHBUG00000013619	kars	100	86.281	ENSTRUG00000017551	kars	100	86.281	Takifugu_rubripes
ENSHBUG00000013619	kars	96	88.496	ENSTNIG00000009351	kars	97	87.211	Tetraodon_nigroviridis
ENSHBUG00000013619	kars	94	63.082	ENSTBEG00000004610	KARS	78	72.160	Tupaia_belangeri
ENSHBUG00000013619	kars	96	78.584	ENSTTRG00000001221	KARS	91	78.571	Tursiops_truncatus
ENSHBUG00000013619	kars	97	78.559	ENSUAMG00000017557	KARS	97	78.830	Ursus_americanus
ENSHBUG00000013619	kars	99	75.777	ENSUMAG00000014559	KARS	97	76.026	Ursus_maritimus
ENSHBUG00000013619	kars	98	76.014	ENSVPAG00000003716	KARS	97	75.082	Vicugna_pacos
ENSHBUG00000013619	kars	97	79.316	ENSVVUG00000024338	KARS	96	81.041	Vulpes_vulpes
ENSHBUG00000013619	kars	98	79.966	ENSXETG00000003569	kars	100	79.966	Xenopus_tropicalis
ENSHBUG00000013619	kars	95	92.473	ENSXCOG00000011313	kars	96	93.494	Xiphophorus_couchianus
ENSHBUG00000013619	kars	99	91.612	ENSXMAG00000003191	kars	99	92.201	Xiphophorus_maculatus