EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000013654 (Gene tree)
Gene ID: 102293779
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 4460 bases
Position: chrJH425441.1:403821-408280
Accession: 102293779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000029311	zf-C2H2	PF00096.26	2.3e-12	1	3
ENSHBUP00000029311	zf-C2H2	PF00096.26	2.3e-12	2	3
ENSHBUP00000029311	zf-C2H2	PF00096.26	2.3e-12	3	3
ENSHBUP00000029311	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000019287	-	1731	XM_005930515	ENSHBUP00000029311	576 (aa)	XP_005930577	UPI000329A2AD

Gene Model

Click here to download ENSHBUG00000013654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013654's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000013654	zbtb18	67	32.787	ENSHBUG00000013427	bcl6aa	66	36.735
ENSHBUG00000013654	zbtb18	94	41.026	ENSHBUG00000012173	zbtb16a	56	41.026
ENSHBUG00000013654	zbtb18	55	34.513	ENSHBUG00000011090	ZBTB14	72	34.513
ENSHBUG00000013654	zbtb18	92	35.433	ENSHBUG00000016619	zbtb47b	88	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013654	zbtb18	100	96.891	ENSAPOG00000005168	zbtb18	100	96.891	Acanthochromis_polyacanthus
ENSHBUG00000013654	zbtb18	99	87.544	ENSACIG00000008655	zbtb18	99	87.544	Amphilophus_citrinellus
ENSHBUG00000013654	zbtb18	100	97.237	ENSAOCG00000014105	zbtb18	100	97.237	Amphiprion_ocellaris
ENSHBUG00000013654	zbtb18	100	96.735	ENSAPEG00000003817	zbtb18	79	96.735	Amphiprion_percula
ENSHBUG00000013654	zbtb18	100	96.007	ENSATEG00000010192	zbtb18	100	96.007	Anabas_testudineus
ENSHBUG00000013654	zbtb18	99	100.000	ENSACLG00000022978	zbtb18	98	100.000	Astatotilapia_calliptera
ENSHBUG00000013654	zbtb18	99	73.083	ENSAMXG00000042119	zbtb18	99	72.232	Astyanax_mexicanus
ENSHBUG00000013654	zbtb18	100	93.229	ENSCSEG00000003083	zbtb18	100	93.229	Cynoglossus_semilaevis
ENSHBUG00000013654	zbtb18	100	94.097	ENSCVAG00000016785	zbtb18	100	94.097	Cyprinodon_variegatus
ENSHBUG00000013654	zbtb18	98	71.728	ENSDARG00000028228	zbtb18	100	73.298	Danio_rerio
ENSHBUG00000013654	zbtb18	100	75.387	ENSELUG00000013471	zbtb18	100	74.699	Esox_lucius
ENSHBUG00000013654	zbtb18	99	94.251	ENSFHEG00000020005	zbtb18	99	94.251	Fundulus_heteroclitus
ENSHBUG00000013654	zbtb18	57	92.268	ENSGMOG00000018718	zbtb18	60	91.795	Gadus_morhua
ENSHBUG00000013654	zbtb18	99	91.812	ENSGAFG00000000619	zbtb18	99	91.812	Gambusia_affinis
ENSHBUG00000013654	zbtb18	100	90.451	ENSGACG00000010518	zbtb18	97	90.625	Gasterosteus_aculeatus
ENSHBUG00000013654	zbtb18	54	88.710	ENSHCOG00000002345	zbtb18	94	88.710	Hippocampus_comes
ENSHBUG00000013654	zbtb18	99	66.437	ENSIPUG00000008912	zbtb18	99	65.972	Ictalurus_punctatus
ENSHBUG00000013654	zbtb18	100	96.354	ENSKMAG00000002780	zbtb18	100	96.354	Kryptolebias_marmoratus
ENSHBUG00000013654	zbtb18	100	94.444	ENSLBEG00000014796	zbtb18	100	94.444	Labrus_bergylta
ENSHBUG00000013654	zbtb18	84	60.400	ENSMFAG00000033326	ZBTB18	99	58.918	Macaca_fascicularis
ENSHBUG00000013654	zbtb18	84	60.721	ENSMMUG00000015664	ZBTB18	100	59.229	Macaca_mulatta
ENSHBUG00000013654	zbtb18	100	96.875	ENSMAMG00000021720	zbtb18	100	96.875	Mastacembelus_armatus
ENSHBUG00000013654	zbtb18	100	100.000	ENSMZEG00005027394	zbtb18	100	100.000	Maylandia_zebra
ENSHBUG00000013654	zbtb18	94	50.919	ENSMGAG00000015389	-	100	50.462	Meleagris_gallopavo
ENSHBUG00000013654	zbtb18	98	87.809	ENSMMOG00000007888	zbtb18	99	87.809	Mola_mola
ENSHBUG00000013654	zbtb18	100	95.312	ENSMALG00000000725	zbtb18	100	95.312	Monopterus_albus
ENSHBUG00000013654	zbtb18	98	99.292	ENSNBRG00000013796	zbtb18	100	99.292	Neolamprologus_brichardi
ENSHBUG00000013654	zbtb18	100	99.306	ENSONIG00000000862	zbtb18	100	99.306	Oreochromis_niloticus
ENSHBUG00000013654	zbtb18	99	93.892	ENSORLG00000027425	zbtb18	98	94.221	Oryzias_latipes
ENSHBUG00000013654	zbtb18	99	94.066	ENSORLG00020011988	zbtb18	98	94.396	Oryzias_latipes_hni
ENSHBUG00000013654	zbtb18	99	94.241	ENSORLG00015017457	zbtb18	98	94.221	Oryzias_latipes_hsok
ENSHBUG00000013654	zbtb18	99	94.571	ENSOMEG00000011249	zbtb18	98	94.571	Oryzias_melastigma
ENSHBUG00000013654	zbtb18	98	55.268	ENSPKIG00000008787	-	100	55.363	Paramormyrops_kingsleyae
ENSHBUG00000013654	zbtb18	99	70.000	ENSPKIG00000021964	zbtb18	96	70.256	Paramormyrops_kingsleyae
ENSHBUG00000013654	zbtb18	98	83.186	ENSPMGG00000008020	zbtb18	100	83.186	Periophthalmus_magnuspinnatus
ENSHBUG00000013654	zbtb18	98	91.519	ENSPFOG00000022080	zbtb18	100	91.519	Poecilia_formosa
ENSHBUG00000013654	zbtb18	98	85.866	ENSPLAG00000020960	zbtb18	100	85.866	Poecilia_latipinna
ENSHBUG00000013654	zbtb18	98	85.866	ENSPLAG00000011299	-	100	85.866	Poecilia_latipinna
ENSHBUG00000013654	zbtb18	98	92.403	ENSPMEG00000007554	zbtb18	100	92.403	Poecilia_mexicana
ENSHBUG00000013654	zbtb18	99	92.683	ENSPREG00000008576	zbtb18	99	92.683	Poecilia_reticulata
ENSHBUG00000013654	zbtb18	100	100.000	ENSPNYG00000001530	zbtb18	100	100.000	Pundamilia_nyererei
ENSHBUG00000013654	zbtb18	86	70.727	ENSPNAG00000014066	zbtb18	88	68.130	Pygocentrus_nattereri
ENSHBUG00000013654	zbtb18	98	94.336	ENSSMAG00000018041	zbtb18	100	93.805	Scophthalmus_maximus
ENSHBUG00000013654	zbtb18	98	97.168	ENSSDUG00000018660	zbtb18	100	97.168	Seriola_dumerili
ENSHBUG00000013654	zbtb18	98	97.168	ENSSLDG00000022573	zbtb18	100	97.168	Seriola_lalandi_dorsalis
ENSHBUG00000013654	zbtb18	94	46.886	ENSSPUG00000010554	-	100	50.549	Sphenodon_punctatus
ENSHBUG00000013654	zbtb18	100	97.396	ENSSPAG00000002691	zbtb18	100	97.396	Stegastes_partitus
ENSHBUG00000013654	zbtb18	98	93.982	ENSTRUG00000020604	zbtb18	100	93.982	Takifugu_rubripes
ENSHBUG00000013654	zbtb18	99	85.913	ENSTNIG00000000430	zbtb18	99	86.213	Tetraodon_nigroviridis
ENSHBUG00000013654	zbtb18	98	86.749	ENSXCOG00000013308	zbtb18	100	87.633	Xiphophorus_couchianus
ENSHBUG00000013654	zbtb18	99	83.187	ENSXMAG00000018241	zbtb18	99	83.187	Xiphophorus_maculatus