EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000013953 (Gene tree)
Gene ID: -
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 6015 bases
Position: chrJH427159.1:3412-9426
Accession: 102309318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000029483	PC4	PF02229.16	4.8e-26	1	1
ENSHBUP00000029485	PC4	PF02229.16	5.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000032453	-	405	-	ENSHBUP00000029483	134 (aa)	-	-
ENSHBUT00000032460	-	3831	XM_005952583	ENSHBUP00000029485	136 (aa)	XP_005952645	UPI0003BDC7A4

Gene Model

Click here to download ENSHBUG00000013953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013953	sub1b	77	73.077	ENSG00000113387	SUB1	82	73.077	Homo_sapiens
ENSHBUG00000013953	sub1b	77	92.233	ENSAPOG00000005917	SUB1	99	79.839	Acanthochromis_polyacanthus
ENSHBUG00000013953	sub1b	77	72.115	ENSAMEG00000006238	SUB1	78	72.115	Ailuropoda_melanoleuca
ENSHBUG00000013953	sub1b	93	86.290	ENSACIG00000015976	sub1b	99	86.290	Amphilophus_citrinellus
ENSHBUG00000013953	sub1b	76	82.353	ENSAOCG00000002323	-	83	80.583	Amphiprion_ocellaris
ENSHBUG00000013953	sub1b	76	97.059	ENSAOCG00000007313	-	83	97.059	Amphiprion_ocellaris
ENSHBUG00000013953	sub1b	93	83.871	ENSAPEG00000024347	sub1b	99	83.871	Amphiprion_percula
ENSHBUG00000013953	sub1b	89	70.248	ENSAPEG00000017151	-	92	70.248	Amphiprion_percula
ENSHBUG00000013953	sub1b	77	95.146	ENSATEG00000010340	sub1b	99	82.258	Anabas_testudineus
ENSHBUG00000013953	sub1b	79	72.642	ENSACAG00000007974	SUB1	80	72.642	Anolis_carolinensis
ENSHBUG00000013953	sub1b	77	72.816	ENSANAG00000023392	-	68	72.816	Aotus_nancymaae
ENSHBUG00000013953	sub1b	77	73.077	ENSANAG00000011651	-	82	73.077	Aotus_nancymaae
ENSHBUG00000013953	sub1b	78	99.038	ENSACLG00000016875	sub1b	53	99.038	Astatotilapia_calliptera
ENSHBUG00000013953	sub1b	77	81.731	ENSAMXG00000037104	sub1b	99	68.000	Astyanax_mexicanus
ENSHBUG00000013953	sub1b	96	61.069	ENSBTAG00000021965	SUB1	82	73.077	Bos_taurus
ENSHBUG00000013953	sub1b	69	39.362	WBGene00011743	T13F2.2	50	51.613	Caenorhabditis_elegans
ENSHBUG00000013953	sub1b	58	73.418	ENSCJAG00000018718	SUB1	76	73.418	Callithrix_jacchus
ENSHBUG00000013953	sub1b	77	68.932	ENSCAFG00000024488	-	82	68.932	Canis_familiaris
ENSHBUG00000013953	sub1b	77	72.115	ENSCAFG00000018879	-	72	72.115	Canis_familiaris
ENSHBUG00000013953	sub1b	77	72.115	ENSCAFG00000016713	-	79	72.115	Canis_familiaris
ENSHBUG00000013953	sub1b	77	71.429	ENSCAFG00020011479	-	63	71.429	Canis_lupus_dingo
ENSHBUG00000013953	sub1b	77	72.115	ENSCAFG00020016840	-	82	72.115	Canis_lupus_dingo
ENSHBUG00000013953	sub1b	77	73.077	ENSCHIG00000008460	SUB1	82	73.077	Capra_hircus
ENSHBUG00000013953	sub1b	77	73.077	ENSTSYG00000029948	-	82	73.077	Carlito_syrichta
ENSHBUG00000013953	sub1b	77	63.462	ENSTSYG00000035366	-	67	63.462	Carlito_syrichta
ENSHBUG00000013953	sub1b	77	67.290	ENSTSYG00000014069	-	76	67.290	Carlito_syrichta
ENSHBUG00000013953	sub1b	77	73.077	ENSCPOG00000031334	SUB1	82	73.077	Cavia_porcellus
ENSHBUG00000013953	sub1b	77	70.192	ENSCCAG00000033751	-	78	70.192	Cebus_capucinus
ENSHBUG00000013953	sub1b	77	69.231	ENSCCAG00000020604	-	82	69.231	Cebus_capucinus
ENSHBUG00000013953	sub1b	77	65.049	ENSCCAG00000017043	-	75	65.049	Cebus_capucinus
ENSHBUG00000013953	sub1b	77	73.077	ENSCCAG00000023605	-	82	73.077	Cebus_capucinus
ENSHBUG00000013953	sub1b	77	73.077	ENSCATG00000031199	SUB1	82	73.077	Cercocebus_atys
ENSHBUG00000013953	sub1b	77	71.429	ENSCLAG00000007522	SUB1	82	71.429	Chinchilla_lanigera
ENSHBUG00000013953	sub1b	77	73.077	ENSCSAG00000019449	-	82	72.115	Chlorocebus_sabaeus
ENSHBUG00000013953	sub1b	77	73.077	ENSCSAG00000017172	-	82	73.077	Chlorocebus_sabaeus
ENSHBUG00000013953	sub1b	70	79.787	ENSCPBG00000024218	SUB1	64	79.612	Chrysemys_picta_bellii
ENSHBUG00000013953	sub1b	77	61.165	ENSCANG00000028665	-	71	60.194	Colobus_angolensis_palliatus
ENSHBUG00000013953	sub1b	77	73.077	ENSCANG00000029372	SUB1	82	73.077	Colobus_angolensis_palliatus
ENSHBUG00000013953	sub1b	60	60.920	ENSCGRG00001016254	-	57	72.059	Cricetulus_griseus_chok1gshd
ENSHBUG00000013953	sub1b	66	66.667	ENSCGRG00001014660	-	55	73.529	Cricetulus_griseus_chok1gshd
ENSHBUG00000013953	sub1b	77	70.192	ENSCGRG00001003473	-	82	70.192	Cricetulus_griseus_chok1gshd
ENSHBUG00000013953	sub1b	77	70.192	ENSCGRG00000001133	-	82	70.192	Cricetulus_griseus_crigri
ENSHBUG00000013953	sub1b	66	66.667	ENSCGRG00000019368	-	55	73.529	Cricetulus_griseus_crigri
ENSHBUG00000013953	sub1b	51	72.059	ENSCGRG00000001489	-	58	72.059	Cricetulus_griseus_crigri
ENSHBUG00000013953	sub1b	77	81.553	ENSDARG00000007720	sub1b	98	71.545	Danio_rerio
ENSHBUG00000013953	sub1b	76	81.373	ENSDARG00000053446	sub1a	99	68.548	Danio_rerio
ENSHBUG00000013953	sub1b	77	70.192	ENSDNOG00000040794	-	82	70.192	Dasypus_novemcinctus
ENSHBUG00000013953	sub1b	77	69.231	ENSDNOG00000032396	-	82	69.231	Dasypus_novemcinctus
ENSHBUG00000013953	sub1b	77	71.154	ENSDORG00000013916	Sub1	82	71.154	Dipodomys_ordii
ENSHBUG00000013953	sub1b	75	55.340	ENSEBUG00000008746	sub1a	53	54.455	Eptatretus_burgeri
ENSHBUG00000013953	sub1b	77	73.077	ENSEASG00005007099	SUB1	82	73.077	Equus_asinus_asinus
ENSHBUG00000013953	sub1b	77	73.077	ENSECAG00000012399	SUB1	82	73.077	Equus_caballus
ENSHBUG00000013953	sub1b	75	71.287	ENSEEUG00000000436	SUB1	99	71.287	Erinaceus_europaeus
ENSHBUG00000013953	sub1b	77	72.115	ENSFCAG00000037288	SUB1	82	72.115	Felis_catus
ENSHBUG00000013953	sub1b	77	78.641	ENSFALG00000002143	SUB1	71	78.641	Ficedula_albicollis
ENSHBUG00000013953	sub1b	77	73.077	ENSFDAG00000017179	SUB1	82	73.077	Fukomys_damarensis
ENSHBUG00000013953	sub1b	70	50.526	ENSGALG00000027147	-	54	61.765	Gallus_gallus
ENSHBUG00000013953	sub1b	77	78.641	ENSGALG00000034905	-	82	78.641	Gallus_gallus
ENSHBUG00000013953	sub1b	70	80.851	ENSGALG00000003248	SUB1	82	80.583	Gallus_gallus
ENSHBUG00000013953	sub1b	95	77.953	ENSGACG00000003912	sub1b	99	79.032	Gasterosteus_aculeatus
ENSHBUG00000013953	sub1b	77	80.583	ENSGAGG00000013535	SUB1	82	80.583	Gopherus_agassizii
ENSHBUG00000013953	sub1b	77	73.077	ENSGGOG00000040900	SUB1	82	73.077	Gorilla_gorilla
ENSHBUG00000013953	sub1b	77	73.077	ENSHGLG00000006749	SUB1	82	73.077	Heterocephalus_glaber_female
ENSHBUG00000013953	sub1b	77	73.077	ENSHGLG00100014344	SUB1	82	73.077	Heterocephalus_glaber_male
ENSHBUG00000013953	sub1b	93	77.419	ENSHCOG00000001809	sub1b	99	77.419	Hippocampus_comes
ENSHBUG00000013953	sub1b	77	76.415	ENSIPUG00000024367	SUB1	99	66.929	Ictalurus_punctatus
ENSHBUG00000013953	sub1b	77	81.553	ENSIPUG00000008166	sub1	99	70.968	Ictalurus_punctatus
ENSHBUG00000013953	sub1b	77	73.077	ENSSTOG00000019364	SUB1	82	73.077	Ictidomys_tridecemlineatus
ENSHBUG00000013953	sub1b	77	72.115	ENSJJAG00000018885	Sub1	82	71.154	Jaculus_jaculus
ENSHBUG00000013953	sub1b	77	89.320	ENSLBEG00000010728	sub1b	99	77.419	Labrus_bergylta
ENSHBUG00000013953	sub1b	77	83.495	ENSLOCG00000006692	sub1b	82	83.495	Lepisosteus_oculatus
ENSHBUG00000013953	sub1b	77	75.000	ENSLAFG00000032088	-	82	74.038	Loxodonta_africana
ENSHBUG00000013953	sub1b	77	75.000	ENSLAFG00000011006	-	82	74.038	Loxodonta_africana
ENSHBUG00000013953	sub1b	77	73.077	ENSMFAG00000040728	SUB1	82	73.077	Macaca_fascicularis
ENSHBUG00000013953	sub1b	77	73.077	ENSMMUG00000046181	SUB1	82	73.077	Macaca_mulatta
ENSHBUG00000013953	sub1b	77	73.077	ENSMNEG00000037046	SUB1	82	73.077	Macaca_nemestrina
ENSHBUG00000013953	sub1b	77	73.077	ENSMLEG00000037017	-	82	73.077	Mandrillus_leucophaeus
ENSHBUG00000013953	sub1b	77	71.154	ENSMLEG00000030509	-	77	71.154	Mandrillus_leucophaeus
ENSHBUG00000013953	sub1b	77	61.165	ENSMLEG00000043436	-	71	60.194	Mandrillus_leucophaeus
ENSHBUG00000013953	sub1b	77	95.146	ENSMAMG00000018428	sub1b	99	82.258	Mastacembelus_armatus
ENSHBUG00000013953	sub1b	93	86.290	ENSMZEG00005021252	sub1b	99	86.290	Maylandia_zebra
ENSHBUG00000013953	sub1b	70	80.851	ENSMGAG00000002906	SUB1	82	80.583	Meleagris_gallopavo
ENSHBUG00000013953	sub1b	60	56.790	ENSMGAG00000001200	-	51	63.235	Meleagris_gallopavo
ENSHBUG00000013953	sub1b	77	70.192	ENSMAUG00000020232	Sub1	82	70.192	Mesocricetus_auratus
ENSHBUG00000013953	sub1b	77	73.077	ENSMICG00000014535	SUB1	82	73.077	Microcebus_murinus
ENSHBUG00000013953	sub1b	77	69.231	ENSMOCG00000018930	-	82	69.231	Microtus_ochrogaster
ENSHBUG00000013953	sub1b	71	69.792	ENSMOCG00000016424	-	100	58.209	Microtus_ochrogaster
ENSHBUG00000013953	sub1b	80	75.701	ENSMODG00000020410	SUB1	81	72.174	Monodelphis_domestica
ENSHBUG00000013953	sub1b	77	94.175	ENSMALG00000007163	sub1b	92	75.177	Monopterus_albus
ENSHBUG00000013953	sub1b	77	70.192	MGP_CAROLIEiJ_G0019676	Sub1	82	70.192	Mus_caroli
ENSHBUG00000013953	sub1b	77	70.192	ENSMUSG00000022205	Sub1	82	70.192	Mus_musculus
ENSHBUG00000013953	sub1b	77	69.231	MGP_PahariEiJ_G0016056	Sub1	82	69.231	Mus_pahari
ENSHBUG00000013953	sub1b	77	70.192	MGP_SPRETEiJ_G0020573	Sub1	82	70.192	Mus_spretus
ENSHBUG00000013953	sub1b	77	71.154	ENSMPUG00000018418	-	82	71.154	Mustela_putorius_furo
ENSHBUG00000013953	sub1b	77	72.115	ENSMPUG00000015185	-	82	72.115	Mustela_putorius_furo
ENSHBUG00000013953	sub1b	77	73.077	ENSMLUG00000013685	-	78	73.077	Myotis_lucifugus
ENSHBUG00000013953	sub1b	77	69.231	ENSMLUG00000009236	-	78	68.269	Myotis_lucifugus
ENSHBUG00000013953	sub1b	70	69.149	ENSNGAG00000017212	-	78	69.149	Nannospalax_galili
ENSHBUG00000013953	sub1b	77	71.154	ENSNGAG00000014072	-	82	71.154	Nannospalax_galili
ENSHBUG00000013953	sub1b	77	69.903	ENSNGAG00000010782	-	69	69.903	Nannospalax_galili
ENSHBUG00000013953	sub1b	90	99.187	ENSNBRG00000008451	sub1b	100	99.187	Neolamprologus_brichardi
ENSHBUG00000013953	sub1b	77	74.038	ENSNLEG00000018383	-	78	74.038	Nomascus_leucogenys
ENSHBUG00000013953	sub1b	77	72.115	ENSNLEG00000036068	SUB1	82	72.115	Nomascus_leucogenys
ENSHBUG00000013953	sub1b	77	71.845	ENSNLEG00000035968	-	82	71.845	Nomascus_leucogenys
ENSHBUG00000013953	sub1b	77	77.670	ENSMEUG00000007770	SUB1	82	77.670	Notamacropus_eugenii
ENSHBUG00000013953	sub1b	77	71.154	ENSOPRG00000012887	SUB1	82	72.115	Ochotona_princeps
ENSHBUG00000013953	sub1b	77	73.077	ENSODEG00000014558	-	69	72.115	Octodon_degus
ENSHBUG00000013953	sub1b	77	73.077	ENSODEG00000001937	-	82	73.077	Octodon_degus
ENSHBUG00000013953	sub1b	77	71.154	ENSODEG00000015114	-	84	71.154	Octodon_degus
ENSHBUG00000013953	sub1b	77	79.612	ENSOANG00000002328	SUB1	77	79.612	Ornithorhynchus_anatinus
ENSHBUG00000013953	sub1b	77	73.077	ENSOGAG00000009012	-	82	73.077	Otolemur_garnettii
ENSHBUG00000013953	sub1b	75	74.257	ENSOGAG00000000337	-	81	74.257	Otolemur_garnettii
ENSHBUG00000013953	sub1b	77	73.077	ENSOARG00000012154	SUB1	82	73.077	Ovis_aries
ENSHBUG00000013953	sub1b	77	73.077	ENSPPAG00000011212	SUB1	82	73.077	Pan_paniscus
ENSHBUG00000013953	sub1b	77	72.115	ENSPPRG00000008557	SUB1	82	72.115	Panthera_pardus
ENSHBUG00000013953	sub1b	77	72.115	ENSPTIG00000009466	SUB1	82	72.115	Panthera_tigris_altaica
ENSHBUG00000013953	sub1b	77	73.077	ENSPTRG00000048895	SUB1	82	73.077	Pan_troglodytes
ENSHBUG00000013953	sub1b	77	66.346	ENSPTRG00000041644	-	82	66.346	Pan_troglodytes
ENSHBUG00000013953	sub1b	77	73.077	ENSPANG00000002644	-	78	73.077	Papio_anubis
ENSHBUG00000013953	sub1b	75	73.529	ENSPANG00000035601	-	81	71.569	Papio_anubis
ENSHBUG00000013953	sub1b	77	73.077	ENSPANG00000000339	-	79	73.077	Papio_anubis
ENSHBUG00000013953	sub1b	77	71.154	ENSPANG00000000672	-	74	71.154	Papio_anubis
ENSHBUG00000013953	sub1b	77	63.107	ENSPANG00000033272	-	71	62.136	Papio_anubis
ENSHBUG00000013953	sub1b	77	80.583	ENSPKIG00000016923	sub1b	99	70.161	Paramormyrops_kingsleyae
ENSHBUG00000013953	sub1b	70	78.723	ENSPSIG00000005731	SUB1	77	78.641	Pelodiscus_sinensis
ENSHBUG00000013953	sub1b	77	77.670	ENSPCIG00000020907	-	82	77.670	Phascolarctos_cinereus
ENSHBUG00000013953	sub1b	77	69.903	ENSPCIG00000020827	-	81	69.903	Phascolarctos_cinereus
ENSHBUG00000013953	sub1b	77	69.231	ENSPPYG00000018347	-	82	69.231	Pongo_abelii
ENSHBUG00000013953	sub1b	77	73.077	ENSPPYG00000015379	SUB1	82	73.077	Pongo_abelii
ENSHBUG00000013953	sub1b	77	73.077	ENSPCOG00000014391	SUB1	82	73.077	Propithecus_coquereli
ENSHBUG00000013953	sub1b	77	72.115	ENSPVAG00000004785	SUB1	82	72.115	Pteropus_vampyrus
ENSHBUG00000013953	sub1b	93	86.290	ENSPNYG00000010975	sub1b	99	86.290	Pundamilia_nyererei
ENSHBUG00000013953	sub1b	76	84.314	ENSPNAG00000005998	sub1b	98	73.171	Pygocentrus_nattereri
ENSHBUG00000013953	sub1b	77	70.192	ENSPNAG00000008693	sub1a	99	68.000	Pygocentrus_nattereri
ENSHBUG00000013953	sub1b	77	71.154	ENSRNOG00000050563	Sub1	82	71.154	Rattus_norvegicus
ENSHBUG00000013953	sub1b	75	69.608	ENSRBIG00000031233	SUB1	82	69.608	Rhinopithecus_bieti
ENSHBUG00000013953	sub1b	77	73.077	ENSRROG00000040438	SUB1	82	73.077	Rhinopithecus_roxellana
ENSHBUG00000013953	sub1b	77	68.932	ENSRROG00000042718	-	73	68.932	Rhinopithecus_roxellana
ENSHBUG00000013953	sub1b	77	73.077	ENSSBOG00000026994	SUB1	82	73.077	Saimiri_boliviensis_boliviensis
ENSHBUG00000013953	sub1b	77	77.670	ENSSHAG00000014986	SUB1	82	77.670	Sarcophilus_harrisii
ENSHBUG00000013953	sub1b	77	82.524	ENSSFOG00015017283	sub1b	99	71.774	Scleropages_formosus
ENSHBUG00000013953	sub1b	77	80.769	ENSSFOG00015018386	sub1b	83	80.000	Scleropages_formosus
ENSHBUG00000013953	sub1b	93	80.645	ENSSMAG00000000313	sub1b	99	80.645	Scophthalmus_maximus
ENSHBUG00000013953	sub1b	77	96.117	ENSSDUG00000013854	sub1b	63	96.117	Seriola_dumerili
ENSHBUG00000013953	sub1b	93	83.065	ENSSLDG00000000852	sub1b	99	83.065	Seriola_lalandi_dorsalis
ENSHBUG00000013953	sub1b	70	78.723	ENSSPUG00000016817	SUB1	82	78.641	Sphenodon_punctatus
ENSHBUG00000013953	sub1b	93	83.871	ENSSPAG00000019363	sub1b	99	83.871	Stegastes_partitus
ENSHBUG00000013953	sub1b	77	73.077	ENSSSCG00000032650	-	82	73.077	Sus_scrofa
ENSHBUG00000013953	sub1b	77	73.077	ENSSSCG00000040294	-	71	73.077	Sus_scrofa
ENSHBUG00000013953	sub1b	77	77.670	ENSTGUG00000001918	SUB1	82	77.670	Taeniopygia_guttata
ENSHBUG00000013953	sub1b	77	91.262	ENSTRUG00000024420	sub1b	99	79.032	Takifugu_rubripes
ENSHBUG00000013953	sub1b	77	89.320	ENSTNIG00000002700	sub1b	99	77.419	Tetraodon_nigroviridis
ENSHBUG00000013953	sub1b	77	72.115	ENSTBEG00000004053	-	82	72.115	Tupaia_belangeri
ENSHBUG00000013953	sub1b	76	67.961	ENSTBEG00000015821	-	82	67.961	Tupaia_belangeri
ENSHBUG00000013953	sub1b	77	71.154	ENSTBEG00000012861	-	82	71.154	Tupaia_belangeri
ENSHBUG00000013953	sub1b	77	72.115	ENSTBEG00000006504	-	82	72.115	Tupaia_belangeri
ENSHBUG00000013953	sub1b	77	71.154	ENSTBEG00000001790	-	82	71.154	Tupaia_belangeri
ENSHBUG00000013953	sub1b	77	71.154	ENSTBEG00000011247	-	81	71.154	Tupaia_belangeri
ENSHBUG00000013953	sub1b	75	73.529	ENSTTRG00000017324	SUB1	99	73.529	Tursiops_truncatus
ENSHBUG00000013953	sub1b	77	72.115	ENSUAMG00000000182	SUB1	82	72.115	Ursus_americanus
ENSHBUG00000013953	sub1b	77	72.115	ENSUMAG00000013792	SUB1	82	72.115	Ursus_maritimus
ENSHBUG00000013953	sub1b	69	73.118	ENSVPAG00000011012	SUB1	74	73.118	Vicugna_pacos
ENSHBUG00000013953	sub1b	77	72.115	ENSVVUG00000022166	-	82	72.115	Vulpes_vulpes
ENSHBUG00000013953	sub1b	66	66.667	ENSVVUG00000025193	-	76	66.667	Vulpes_vulpes
ENSHBUG00000013953	sub1b	78	71.154	ENSXETG00000027218	sub1	81	71.154	Xenopus_tropicalis