EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000013978 (Gene tree)
Gene ID: 102294917
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: pre-mRNA 3'-end-processing factor FIP1-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 11984 bases
Position: chrJH425645.1:682348-694331
Accession: 102294917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000012262	Fip1	PF05182.13	1.2e-24	1	1
ENSHBUP00000012271	Fip1	PF05182.13	1.2e-24	1	1
ENSHBUP00000012281	Fip1	PF05182.13	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000019674	-	2488	XM_005941892	ENSHBUP00000012281	555 (aa)	XP_005941954	UPI0006C99D24
ENSHBUT00000032465	-	2140	XM_005941895	ENSHBUP00000012262	532 (aa)	XP_005941957	-
ENSHBUT00000032469	-	2434	XM_005941894	ENSHBUP00000012271	537 (aa)	XP_005941956	-

Gene Model

Click here to download ENSHBUG00000013978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000013978's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000013978	fip1l1b	71	97.917	ENSACIG00000001454	fip1l1b	96	97.917	Amphilophus_citrinellus
ENSHBUG00000013978	fip1l1b	100	93.345	ENSAOCG00000021043	fip1l1b	100	93.345	Amphiprion_ocellaris
ENSHBUG00000013978	fip1l1b	100	93.345	ENSAPEG00000022229	fip1l1b	100	93.345	Amphiprion_percula
ENSHBUG00000013978	fip1l1b	100	93.525	ENSATEG00000021757	fip1l1b	100	93.525	Anabas_testudineus
ENSHBUG00000013978	fip1l1b	93	55.818	ENSAPLG00000003042	-	90	57.834	Anas_platyrhynchos
ENSHBUG00000013978	fip1l1b	69	71.242	ENSACAG00000010556	-	75	71.053	Anolis_carolinensis
ENSHBUG00000013978	fip1l1b	100	100.000	ENSACLG00000010418	fip1l1b	100	100.000	Astatotilapia_calliptera
ENSHBUG00000013978	fip1l1b	50	43.704	ENSAMXG00000031045	fip1l1a	83	41.176	Astyanax_mexicanus
ENSHBUG00000013978	fip1l1b	100	71.858	ENSAMXG00000011126	fip1l1b	89	73.898	Astyanax_mexicanus
ENSHBUG00000013978	fip1l1b	87	60.924	ENSBTAG00000020653	FIP1L1	99	62.477	Bos_taurus
ENSHBUG00000013978	fip1l1b	87	58.116	ENSCHIG00000025903	-	99	59.965	Capra_hircus
ENSHBUG00000013978	fip1l1b	87	54.316	ENSCAPG00000009569	-	80	65.455	Cavia_aperea
ENSHBUG00000013978	fip1l1b	87	60.632	ENSCPOG00000010770	-	85	66.813	Cavia_porcellus
ENSHBUG00000013978	fip1l1b	99	61.475	ENSCPBG00000025019	-	99	59.511	Chrysemys_picta_bellii
ENSHBUG00000013978	fip1l1b	99	56.684	ENSCGRG00001018568	Fip1l1	99	60.072	Cricetulus_griseus_chok1gshd
ENSHBUG00000013978	fip1l1b	99	56.684	ENSCGRG00000000208	Fip1l1	99	60.072	Cricetulus_griseus_crigri
ENSHBUG00000013978	fip1l1b	100	91.280	ENSCSEG00000006583	fip1l1b	100	91.280	Cynoglossus_semilaevis
ENSHBUG00000013978	fip1l1b	100	90.203	ENSCVAG00000023435	fip1l1b	100	90.203	Cyprinodon_variegatus
ENSHBUG00000013978	fip1l1b	100	43.031	ENSDARG00000043328	fip1l1a	92	48.241	Danio_rerio
ENSHBUG00000013978	fip1l1b	100	71.034	ENSDARG00000070431	fip1l1b	100	70.396	Danio_rerio
ENSHBUG00000013978	fip1l1b	84	50.800	ENSETEG00000018271	-	74	67.320	Echinops_telfairi
ENSHBUG00000013978	fip1l1b	87	58.737	ENSEASG00005019566	-	99	59.124	Equus_asinus_asinus
ENSHBUG00000013978	fip1l1b	57	55.398	ENSEEUG00000004965	-	59	55.172	Erinaceus_europaeus
ENSHBUG00000013978	fip1l1b	71	78.636	ENSELUG00000001280	fip1l1b	76	75.983	Esox_lucius
ENSHBUG00000013978	fip1l1b	99	52.105	ENSELUG00000004607	fip1l1a	99	55.882	Esox_lucius
ENSHBUG00000013978	fip1l1b	100	89.800	ENSFHEG00000003843	fip1l1b	100	89.800	Fundulus_heteroclitus
ENSHBUG00000013978	fip1l1b	100	69.618	ENSGMOG00000004913	fip1l1b	100	69.718	Gadus_morhua
ENSHBUG00000013978	fip1l1b	99	61.525	ENSGALG00000013943	-	99	61.706	Gallus_gallus
ENSHBUG00000013978	fip1l1b	100	89.130	ENSGAFG00000008253	fip1l1b	100	89.130	Gambusia_affinis
ENSHBUG00000013978	fip1l1b	100	73.957	ENSGACG00000015946	fip1l1b	100	73.411	Gasterosteus_aculeatus
ENSHBUG00000013978	fip1l1b	99	61.475	ENSGAGG00000009763	-	99	59.511	Gopherus_agassizii
ENSHBUG00000013978	fip1l1b	52	49.831	ENSGAGG00000017677	-	58	56.944	Gopherus_agassizii
ENSHBUG00000013978	fip1l1b	99	84.464	ENSHCOG00000015834	fip1l1b	99	83.750	Hippocampus_comes
ENSHBUG00000013978	fip1l1b	100	58.803	ENSIPUG00000022454	fip1l1b	100	69.312	Ictalurus_punctatus
ENSHBUG00000013978	fip1l1b	100	89.094	ENSKMAG00000021938	fip1l1b	100	89.094	Kryptolebias_marmoratus
ENSHBUG00000013978	fip1l1b	100	90.126	ENSLBEG00000028819	fip1l1b	100	89.767	Labrus_bergylta
ENSHBUG00000013978	fip1l1b	98	60.561	ENSLACG00000011991	fip1l1a	96	62.289	Latimeria_chalumnae
ENSHBUG00000013978	fip1l1b	99	65.398	ENSLOCG00000014127	fip1l1b	99	66.143	Lepisosteus_oculatus
ENSHBUG00000013978	fip1l1b	100	92.022	ENSMAMG00000004535	fip1l1b	100	92.022	Mastacembelus_armatus
ENSHBUG00000013978	fip1l1b	100	99.820	ENSMZEG00005023828	fip1l1b	100	99.820	Maylandia_zebra
ENSHBUG00000013978	fip1l1b	99	54.035	ENSMAUG00000010526	Fip1l1	99	57.394	Mesocricetus_auratus
ENSHBUG00000013978	fip1l1b	99	54.902	ENSMOCG00000008020	Fip1l1	99	58.094	Microtus_ochrogaster
ENSHBUG00000013978	fip1l1b	81	79.954	ENSMMOG00000008262	fip1l1b	92	100.000	Mola_mola
ENSHBUG00000013978	fip1l1b	63	55.319	ENSMODG00000020654	-	93	52.071	Monodelphis_domestica
ENSHBUG00000013978	fip1l1b	100	69.189	ENSMALG00000000838	fip1l1b	84	85.714	Monopterus_albus
ENSHBUG00000013978	fip1l1b	87	59.329	MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.892	Mus_caroli
ENSHBUG00000013978	fip1l1b	87	59.329	ENSMUSG00000029227	Fip1l1	99	59.892	Mus_musculus
ENSHBUG00000013978	fip1l1b	87	59.329	MGP_PahariEiJ_G0017085	Fip1l1	99	59.892	Mus_pahari
ENSHBUG00000013978	fip1l1b	87	59.329	MGP_SPRETEiJ_G0028299	Fip1l1	99	59.892	Mus_spretus
ENSHBUG00000013978	fip1l1b	87	60.421	ENSNGAG00000008849	Fip1l1	99	60.469	Nannospalax_galili
ENSHBUG00000013978	fip1l1b	100	99.820	ENSNBRG00000017832	fip1l1b	100	99.820	Neolamprologus_brichardi
ENSHBUG00000013978	fip1l1b	100	98.739	ENSONIG00000008785	fip1l1b	100	98.739	Oreochromis_niloticus
ENSHBUG00000013978	fip1l1b	87	50.854	ENSOANG00000003384	-	65	53.281	Ornithorhynchus_anatinus
ENSHBUG00000013978	fip1l1b	100	90.167	ENSORLG00000004397	fip1l1b	100	89.054	Oryzias_latipes
ENSHBUG00000013978	fip1l1b	100	90.353	ENSORLG00020008716	fip1l1b	100	88.868	Oryzias_latipes_hni
ENSHBUG00000013978	fip1l1b	100	90.353	ENSORLG00015006736	fip1l1b	100	89.239	Oryzias_latipes_hsok
ENSHBUG00000013978	fip1l1b	100	61.388	ENSOMEG00000015730	fip1l1b	98	85.714	Oryzias_melastigma
ENSHBUG00000013978	fip1l1b	87	56.313	ENSOARG00000018767	-	86	61.795	Ovis_aries
ENSHBUG00000013978	fip1l1b	100	73.788	ENSPMGG00000017028	fip1l1b	100	73.050	Periophthalmus_magnuspinnatus
ENSHBUG00000013978	fip1l1b	99	56.328	ENSPEMG00000002025	Fip1l1	99	60.072	Peromyscus_maniculatus_bairdii
ENSHBUG00000013978	fip1l1b	55	55.380	ENSPCIG00000019318	-	97	55.806	Phascolarctos_cinereus
ENSHBUG00000013978	fip1l1b	100	89.091	ENSPFOG00000014745	fip1l1b	100	89.091	Poecilia_formosa
ENSHBUG00000013978	fip1l1b	100	85.844	ENSPLAG00000010954	fip1l1b	100	88.929	Poecilia_latipinna
ENSHBUG00000013978	fip1l1b	100	89.273	ENSPMEG00000019187	fip1l1b	100	89.273	Poecilia_mexicana
ENSHBUG00000013978	fip1l1b	82	71.622	ENSPREG00000012535	fip1l1b	90	70.946	Poecilia_reticulata
ENSHBUG00000013978	fip1l1b	68	100.000	ENSPNYG00000015976	fip1l1b	99	100.000	Pundamilia_nyererei
ENSHBUG00000013978	fip1l1b	62	43.544	ENSPNAG00000009853	fip1l1a	59	50.237	Pygocentrus_nattereri
ENSHBUG00000013978	fip1l1b	57	73.438	ENSPNAG00000015341	fip1l1b	71	72.446	Pygocentrus_nattereri
ENSHBUG00000013978	fip1l1b	87	57.442	ENSRNOG00000002275	Fip1l1	99	58.273	Rattus_norvegicus
ENSHBUG00000013978	fip1l1b	87	53.488	ENSSHAG00000015789	-	86	57.564	Sarcophilus_harrisii
ENSHBUG00000013978	fip1l1b	91	60.588	ENSSFOG00015017653	fip1l1b	69	65.530	Scleropages_formosus
ENSHBUG00000013978	fip1l1b	52	48.973	ENSSFOG00015010948	-	55	56.311	Scleropages_formosus
ENSHBUG00000013978	fip1l1b	100	92.022	ENSSMAG00000013444	fip1l1b	100	91.837	Scophthalmus_maximus
ENSHBUG00000013978	fip1l1b	100	95.725	ENSSDUG00000004117	fip1l1b	100	95.725	Seriola_dumerili
ENSHBUG00000013978	fip1l1b	100	95.167	ENSSLDG00000024099	fip1l1b	100	94.981	Seriola_lalandi_dorsalis
ENSHBUG00000013978	fip1l1b	87	51.546	ENSSARG00000001973	-	72	60.622	Sorex_araneus
ENSHBUG00000013978	fip1l1b	52	58.657	ENSSPUG00000017328	-	69	65.238	Sphenodon_punctatus
ENSHBUG00000013978	fip1l1b	100	95.144	ENSSPAG00000017564	fip1l1b	100	95.144	Stegastes_partitus
ENSHBUG00000013978	fip1l1b	100	86.691	ENSTRUG00000001545	fip1l1b	100	87.061	Takifugu_rubripes
ENSHBUG00000013978	fip1l1b	100	77.703	ENSTNIG00000004104	fip1l1b	100	77.534	Tetraodon_nigroviridis
ENSHBUG00000013978	fip1l1b	87	56.539	ENSUMAG00000002758	-	90	61.684	Ursus_maritimus
ENSHBUG00000013978	fip1l1b	74	55.118	ENSVPAG00000011574	-	76	62.176	Vicugna_pacos
ENSHBUG00000013978	fip1l1b	96	60.187	ENSXETG00000011679	fip1l1	92	58.877	Xenopus_tropicalis
ENSHBUG00000013978	fip1l1b	100	68.081	ENSXCOG00000013656	fip1l1b	95	74.944	Xiphophorus_couchianus
ENSHBUG00000013978	fip1l1b	100	89.455	ENSXMAG00000017620	fip1l1b	100	89.455	Xiphophorus_maculatus