EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000014023 (Gene tree)
Gene ID: 102309974
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3869 bases
Position: chrJH425331.1:470136-474004
Accession: 102309974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000012317	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000019725	-	1120	XM_005915285	ENSHBUP00000012317	206 (aa)	XP_005915347	UPI0003BC7FBF

Gene Model

Click here to download ENSHBUG00000014023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000014023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000014023	si:dkey-13a21.4	77	32.500	ENSHBUG00000017973	si:ch73-116o1.2	75	32.500
ENSHBUG00000014023	si:dkey-13a21.4	80	30.120	ENSHBUG00000003805	-	78	30.120
ENSHBUG00000014023	si:dkey-13a21.4	84	34.857	ENSHBUG00000006056	-	80	34.857
ENSHBUG00000014023	si:dkey-13a21.4	86	34.637	ENSHBUG00000003752	rab5aa	81	34.637
ENSHBUG00000014023	si:dkey-13a21.4	62	42.188	ENSHBUG00000012594	RAB29	62	42.188
ENSHBUG00000014023	si:dkey-13a21.4	78	38.272	ENSHBUG00000010304	rab1ab	78	38.272
ENSHBUG00000014023	si:dkey-13a21.4	77	36.875	ENSHBUG00000003539	RAB39B	74	36.875
ENSHBUG00000014023	si:dkey-13a21.4	79	34.756	ENSHBUG00000006823	-	72	34.756
ENSHBUG00000014023	si:dkey-13a21.4	63	34.109	ENSHBUG00000010964	rabl2	55	34.109
ENSHBUG00000014023	si:dkey-13a21.4	76	38.994	ENSHBUG00000015126	rab42a	59	38.994
ENSHBUG00000014023	si:dkey-13a21.4	94	30.000	ENSHBUG00000016064	rab34a	78	30.000
ENSHBUG00000014023	si:dkey-13a21.4	78	39.506	ENSHBUG00000002397	-	75	39.506
ENSHBUG00000014023	si:dkey-13a21.4	76	39.873	ENSHBUG00000001416	rab35b	76	39.873
ENSHBUG00000014023	si:dkey-13a21.4	70	30.345	ENSHBUG00000013197	kras	81	30.769
ENSHBUG00000014023	si:dkey-13a21.4	83	37.853	ENSHBUG00000001518	rab18a	85	37.853
ENSHBUG00000014023	si:dkey-13a21.4	82	33.918	ENSHBUG00000014777	rab11bb	76	33.918
ENSHBUG00000014023	si:dkey-13a21.4	80	34.940	ENSHBUG00000003876	rab25a	77	34.940
ENSHBUG00000014023	si:dkey-13a21.4	79	36.810	ENSHBUG00000019164	rab2a	75	36.810
ENSHBUG00000014023	si:dkey-13a21.4	81	52.976	ENSHBUG00000001595	rab9b	76	52.976
ENSHBUG00000014023	si:dkey-13a21.4	79	34.756	ENSHBUG00000002014	rab5c	79	33.708
ENSHBUG00000014023	si:dkey-13a21.4	72	39.333	ENSHBUG00000013162	rab33ba	71	39.333
ENSHBUG00000014023	si:dkey-13a21.4	76	36.478	ENSHBUG00000013010	rab32b	73	36.478
ENSHBUG00000014023	si:dkey-13a21.4	80	34.940	ENSHBUG00000009320	rab25b	78	34.940
ENSHBUG00000014023	si:dkey-13a21.4	57	33.898	ENSHBUG00000015310	RAP2B	95	34.884
ENSHBUG00000014023	si:dkey-13a21.4	95	37.438	ENSHBUG00000007827	zgc:101559	85	37.438
ENSHBUG00000014023	si:dkey-13a21.4	95	47.475	ENSHBUG00000022669	rab9a	96	47.475
ENSHBUG00000014023	si:dkey-13a21.4	95	35.000	ENSHBUG00000014338	RAB41	92	35.000
ENSHBUG00000014023	si:dkey-13a21.4	79	37.805	ENSHBUG00000003434	rab22a	66	37.805
ENSHBUG00000014023	si:dkey-13a21.4	82	33.918	ENSHBUG00000009947	-	76	33.918
ENSHBUG00000014023	si:dkey-13a21.4	85	33.898	ENSHBUG00000017297	rab15	81	33.898
ENSHBUG00000014023	si:dkey-13a21.4	96	50.746	ENSHBUG00000009014	-	97	50.746
ENSHBUG00000014023	si:dkey-13a21.4	81	37.500	ENSHBUG00000019261	si:dkey-16l2.16	97	33.333
ENSHBUG00000014023	si:dkey-13a21.4	95	36.224	ENSHBUG00000003728	-	96	36.224
ENSHBUG00000014023	si:dkey-13a21.4	96	51.724	ENSHBUG00000010852	RAB7A	97	51.724
ENSHBUG00000014023	si:dkey-13a21.4	75	35.897	ENSHBUG00000003230	rab6bb	76	35.897
ENSHBUG00000014023	si:dkey-13a21.4	80	33.133	ENSHBUG00000001491	dnajc27	64	33.133
ENSHBUG00000014023	si:dkey-13a21.4	95	31.731	ENSHBUG00000022562	-	95	31.731
ENSHBUG00000014023	si:dkey-13a21.4	85	33.333	ENSHBUG00000017620	-	82	33.333
ENSHBUG00000014023	si:dkey-13a21.4	99	34.762	ENSHBUG00000012905	rab6ba	98	34.762
ENSHBUG00000014023	si:dkey-13a21.4	71	31.293	ENSHBUG00000018763	rras	79	32.075
ENSHBUG00000014023	si:dkey-13a21.4	88	48.352	ENSHBUG00000009027	-	86	48.352
ENSHBUG00000014023	si:dkey-13a21.4	68	36.620	ENSHBUG00000007966	rab23	77	34.969
ENSHBUG00000014023	si:dkey-13a21.4	76	34.177	ENSHBUG00000009333	rab11al	71	34.177
ENSHBUG00000014023	si:dkey-13a21.4	87	37.989	ENSHBUG00000003696	rab18b	86	37.989
ENSHBUG00000014023	si:dkey-13a21.4	73	38.462	ENSHBUG00000001714	-	90	32.579
ENSHBUG00000014023	si:dkey-13a21.4	76	35.849	ENSHBUG00000013570	-	73	35.849
ENSHBUG00000014023	si:dkey-13a21.4	85	40.678	ENSHBUG00000000993	rab30	79	40.678
ENSHBUG00000014023	si:dkey-13a21.4	73	31.126	ENSHBUG00000011397	si:cabz01085950.1	73	31.126
ENSHBUG00000014023	si:dkey-13a21.4	82	37.059	ENSHBUG00000008497	rab12	68	37.059
ENSHBUG00000014023	si:dkey-13a21.4	62	36.434	ENSHBUG00000001462	RAB17	55	36.434
ENSHBUG00000014023	si:dkey-13a21.4	95	33.831	ENSHBUG00000000890	rab6a	94	33.831
ENSHBUG00000014023	si:dkey-13a21.4	79	30.061	ENSHBUG00000007788	rheb	86	30.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000014023	si:dkey-13a21.4	99	92.157	ENSACIG00000011024	si:dkey-13a21.4	100	92.157	Amphilophus_citrinellus
ENSHBUG00000014023	si:dkey-13a21.4	99	87.255	ENSAOCG00000020491	si:dkey-13a21.4	100	87.255	Amphiprion_ocellaris
ENSHBUG00000014023	si:dkey-13a21.4	100	86.408	ENSAPEG00000023338	si:dkey-13a21.4	93	86.408	Amphiprion_percula
ENSHBUG00000014023	si:dkey-13a21.4	99	84.804	ENSATEG00000014958	si:dkey-13a21.4	100	84.804	Anabas_testudineus
ENSHBUG00000014023	si:dkey-13a21.4	95	52.308	ENSACAG00000012345	-	97	52.308	Anolis_carolinensis
ENSHBUG00000014023	si:dkey-13a21.4	100	99.515	ENSACLG00000021109	si:dkey-13a21.4	100	99.515	Astatotilapia_calliptera
ENSHBUG00000014023	si:dkey-13a21.4	99	53.738	ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	Astyanax_mexicanus
ENSHBUG00000014023	si:dkey-13a21.4	88	56.831	WBGene00004271	rab-7	100	51.675	Caenorhabditis_elegans
ENSHBUG00000014023	si:dkey-13a21.4	99	86.275	ENSCVAG00000001150	si:dkey-13a21.4	100	86.275	Cyprinodon_variegatus
ENSHBUG00000014023	si:dkey-13a21.4	95	63.077	ENSDARG00000026098	si:dkey-13a21.4	95	63.077	Danio_rerio
ENSHBUG00000014023	si:dkey-13a21.4	86	53.333	ENSDNOG00000043559	-	96	50.505	Dasypus_novemcinctus
ENSHBUG00000014023	si:dkey-13a21.4	99	83.415	ENSFHEG00000002502	si:dkey-13a21.4	100	83.415	Fundulus_heteroclitus
ENSHBUG00000014023	si:dkey-13a21.4	99	82.843	ENSGAFG00000020102	si:dkey-13a21.4	100	82.843	Gambusia_affinis
ENSHBUG00000014023	si:dkey-13a21.4	85	80.114	ENSKMAG00000021039	si:dkey-13a21.4	74	80.114	Kryptolebias_marmoratus
ENSHBUG00000014023	si:dkey-13a21.4	99	85.294	ENSLBEG00000018180	si:dkey-13a21.4	100	85.294	Labrus_bergylta
ENSHBUG00000014023	si:dkey-13a21.4	99	60.680	ENSLOCG00000014749	si:dkey-13a21.4	100	60.680	Lepisosteus_oculatus
ENSHBUG00000014023	si:dkey-13a21.4	85	53.714	ENSLAFG00000028984	-	85	53.714	Loxodonta_africana
ENSHBUG00000014023	si:dkey-13a21.4	99	86.275	ENSMAMG00000021095	si:dkey-13a21.4	100	86.275	Mastacembelus_armatus
ENSHBUG00000014023	si:dkey-13a21.4	100	99.029	ENSMZEG00005010220	si:dkey-13a21.4	100	99.029	Maylandia_zebra
ENSHBUG00000014023	si:dkey-13a21.4	100	97.573	ENSNBRG00000023214	si:dkey-13a21.4	100	97.573	Neolamprologus_brichardi
ENSHBUG00000014023	si:dkey-13a21.4	99	98.529	ENSONIG00000020296	si:dkey-13a21.4	100	98.529	Oreochromis_niloticus
ENSHBUG00000014023	si:dkey-13a21.4	99	81.373	ENSORLG00000025098	si:dkey-13a21.4	100	81.373	Oryzias_latipes
ENSHBUG00000014023	si:dkey-13a21.4	99	80.882	ENSORLG00020019465	si:dkey-13a21.4	100	80.882	Oryzias_latipes_hni
ENSHBUG00000014023	si:dkey-13a21.4	99	81.373	ENSORLG00015015121	si:dkey-13a21.4	100	81.373	Oryzias_latipes_hsok
ENSHBUG00000014023	si:dkey-13a21.4	95	63.452	ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	Paramormyrops_kingsleyae
ENSHBUG00000014023	si:dkey-13a21.4	100	77.670	ENSPMGG00000023170	si:dkey-13a21.4	98	77.670	Periophthalmus_magnuspinnatus
ENSHBUG00000014023	si:dkey-13a21.4	99	83.333	ENSPFOG00000015409	si:dkey-13a21.4	100	83.333	Poecilia_formosa
ENSHBUG00000014023	si:dkey-13a21.4	99	83.333	ENSPLAG00000019688	si:dkey-13a21.4	100	83.333	Poecilia_latipinna
ENSHBUG00000014023	si:dkey-13a21.4	99	83.333	ENSPMEG00000019159	si:dkey-13a21.4	100	83.333	Poecilia_mexicana
ENSHBUG00000014023	si:dkey-13a21.4	99	82.843	ENSPREG00000022241	si:dkey-13a21.4	100	82.843	Poecilia_reticulata
ENSHBUG00000014023	si:dkey-13a21.4	100	99.515	ENSPNYG00000018613	si:dkey-13a21.4	100	99.515	Pundamilia_nyererei
ENSHBUG00000014023	si:dkey-13a21.4	99	44.762	YML001W	YPT7	100	44.762	Saccharomyces_cerevisiae
ENSHBUG00000014023	si:dkey-13a21.4	95	63.776	ENSSFOG00015009566	si:dkey-13a21.4	96	63.776	Scleropages_formosus
ENSHBUG00000014023	si:dkey-13a21.4	100	82.039	ENSSMAG00000013945	si:dkey-13a21.4	100	82.039	Scophthalmus_maximus
ENSHBUG00000014023	si:dkey-13a21.4	99	90.686	ENSSDUG00000019738	si:dkey-13a21.4	100	90.686	Seriola_dumerili
ENSHBUG00000014023	si:dkey-13a21.4	99	90.196	ENSSLDG00000011597	si:dkey-13a21.4	100	90.196	Seriola_lalandi_dorsalis
ENSHBUG00000014023	si:dkey-13a21.4	95	51.282	ENSXETG00000014257	mgc75872	97	51.282	Xenopus_tropicalis