EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000014048 (Gene tree)
Gene ID: 102301555
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 5528 bases
Position: chrJH425486.1:518999-524526
Accession: 102301555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000029544	RRM_1	PF00076.22	3.3e-33	1	2
ENSHBUP00000029544	RRM_1	PF00076.22	3.3e-33	2	2
ENSHBUP00000029544	RRM_3	PF08777.11	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000019758	-	2730	XM_005934001	ENSHBUP00000029544	295 (aa)	XP_005934063	UPI0003BDBDB4

Gene Model

Click here to download ENSHBUG00000014048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000014048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000014048	srsf5a	61	41.398	ENSHBUG00000019320	srsf9	68	42.473
ENSHBUG00000014048	srsf5a	90	58.363	ENSHBUG00000012462	srsf5b	93	68.421
ENSHBUG00000014048	srsf5a	60	41.530	ENSHBUG00000016788	srsf1a	68	42.623
ENSHBUG00000014048	srsf5a	63	65.591	ENSHBUG00000011326	-	62	53.712
ENSHBUG00000014048	srsf5a	74	46.983	ENSHBUG00000015576	-	81	45.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000014048	srsf5a	100	87.748	ENSAPOG00000017395	srsf5a	78	92.017	Acanthochromis_polyacanthus
ENSHBUG00000014048	srsf5a	91	81.919	ENSACIG00000011892	srsf5a	96	94.891	Amphilophus_citrinellus
ENSHBUG00000014048	srsf5a	81	86.777	ENSAOCG00000014967	srsf5a	80	90.496	Amphiprion_ocellaris
ENSHBUG00000014048	srsf5a	81	86.777	ENSAPEG00000009297	srsf5a	80	90.496	Amphiprion_percula
ENSHBUG00000014048	srsf5a	91	91.418	ENSATEG00000000198	srsf5a	82	93.697	Anabas_testudineus
ENSHBUG00000014048	srsf5a	64	73.958	ENSAPLG00000002469	-	70	72.917	Anas_platyrhynchos
ENSHBUG00000014048	srsf5a	64	75.263	ENSACAG00000029015	-	68	73.822	Anolis_carolinensis
ENSHBUG00000014048	srsf5a	100	99.324	ENSACLG00000027166	srsf5a	100	99.324	Astatotilapia_calliptera
ENSHBUG00000014048	srsf5a	64	84.694	ENSAMXG00000030476	srsf5a	67	83.158	Astyanax_mexicanus
ENSHBUG00000014048	srsf5a	64	76.963	ENSCPBG00000021518	-	70	75.393	Chrysemys_picta_bellii
ENSHBUG00000014048	srsf5a	64	56.633	ENSCSAVG00000011376	-	78	58.163	Ciona_savignyi
ENSHBUG00000014048	srsf5a	81	93.827	ENSCSEG00000008109	srsf5a	77	93.776	Cynoglossus_semilaevis
ENSHBUG00000014048	srsf5a	80	84.362	ENSCVAG00000016982	srsf5a	96	84.211	Cyprinodon_variegatus
ENSHBUG00000014048	srsf5a	84	72.093	ENSDARG00000029818	srsf5a	100	80.576	Danio_rerio
ENSHBUG00000014048	srsf5a	64	75.980	ENSELUG00000020439	srsf5a	62	80.829	Esox_lucius
ENSHBUG00000014048	srsf5a	64	73.684	ENSFALG00000005098	-	64	73.158	Ficedula_albicollis
ENSHBUG00000014048	srsf5a	82	81.783	ENSFHEG00000003955	srsf5a	97	80.000	Fundulus_heteroclitus
ENSHBUG00000014048	srsf5a	64	84.737	ENSGMOG00000000869	srsf5a	94	84.737	Gadus_morhua
ENSHBUG00000014048	srsf5a	64	73.158	ENSGALG00000033259	SRSF5A	63	72.105	Gallus_gallus
ENSHBUG00000014048	srsf5a	82	72.400	ENSGAFG00000018237	srsf5a	78	61.538	Gambusia_affinis
ENSHBUG00000014048	srsf5a	64	76.963	ENSGAGG00000007312	-	70	75.393	Gopherus_agassizii
ENSHBUG00000014048	srsf5a	64	88.421	ENSHCOG00000017557	srsf5a	62	87.895	Hippocampus_comes
ENSHBUG00000014048	srsf5a	64	86.842	ENSIPUG00000003439	srsf5a	69	86.842	Ictalurus_punctatus
ENSHBUG00000014048	srsf5a	86	77.444	ENSKMAG00000014937	srsf5a	71	83.264	Kryptolebias_marmoratus
ENSHBUG00000014048	srsf5a	64	92.308	ENSLBEG00000017153	srsf5a	74	92.821	Labrus_bergylta
ENSHBUG00000014048	srsf5a	64	81.053	ENSLACG00000017874	-	70	80.526	Latimeria_chalumnae
ENSHBUG00000014048	srsf5a	64	81.633	ENSLOCG00000014075	srsf5a	61	83.158	Lepisosteus_oculatus
ENSHBUG00000014048	srsf5a	100	86.441	ENSMAMG00000000192	srsf5a	82	86.975	Mastacembelus_armatus
ENSHBUG00000014048	srsf5a	100	99.661	ENSMZEG00005010485	srsf5a	100	99.661	Maylandia_zebra
ENSHBUG00000014048	srsf5a	73	70.968	ENSMGAG00000011888	-	96	72.093	Meleagris_gallopavo
ENSHBUG00000014048	srsf5a	100	87.500	ENSMMOG00000009793	srsf5a	78	90.756	Mola_mola
ENSHBUG00000014048	srsf5a	100	80.678	ENSMALG00000021194	srsf5a	79	80.252	Monopterus_albus
ENSHBUG00000014048	srsf5a	100	99.322	ENSNBRG00000000771	srsf5a	100	99.322	Neolamprologus_brichardi
ENSHBUG00000014048	srsf5a	100	99.322	ENSONIG00000019583	srsf5a	100	99.322	Oreochromis_niloticus
ENSHBUG00000014048	srsf5a	80	86.555	ENSORLG00000009268	srsf5a	83	84.874	Oryzias_latipes
ENSHBUG00000014048	srsf5a	80	86.555	ENSORLG00020003281	srsf5	83	84.874	Oryzias_latipes_hni
ENSHBUG00000014048	srsf5a	80	86.555	ENSORLG00015023075	srsf5	83	84.874	Oryzias_latipes_hsok
ENSHBUG00000014048	srsf5a	80	85.654	ENSOMEG00000000628	srsf5a	83	84.874	Oryzias_melastigma
ENSHBUG00000014048	srsf5a	64	82.234	ENSPKIG00000002054	srsf5a	68	85.263	Paramormyrops_kingsleyae
ENSHBUG00000014048	srsf5a	64	76.440	ENSPSIG00000008238	-	69	73.298	Pelodiscus_sinensis
ENSHBUG00000014048	srsf5a	82	66.667	ENSPMGG00000020125	srsf5a	55	80.000	Periophthalmus_magnuspinnatus
ENSHBUG00000014048	srsf5a	82	83.529	ENSPFOG00000022993	srsf5a	78	82.731	Poecilia_formosa
ENSHBUG00000014048	srsf5a	82	83.465	ENSPLAG00000005508	srsf5a	77	82.661	Poecilia_latipinna
ENSHBUG00000014048	srsf5a	82	83.922	ENSPMEG00000016339	srsf5a	78	83.133	Poecilia_mexicana
ENSHBUG00000014048	srsf5a	82	83.203	ENSPREG00000018091	srsf5a	79	82.800	Poecilia_reticulata
ENSHBUG00000014048	srsf5a	100	99.661	ENSPNYG00000021245	srsf5a	100	99.661	Pundamilia_nyererei
ENSHBUG00000014048	srsf5a	94	61.905	ENSPNAG00000021333	srsf5a	66	83.684	Pygocentrus_nattereri
ENSHBUG00000014048	srsf5a	64	81.726	ENSSFOG00015008377	srsf5	66	84.211	Scleropages_formosus
ENSHBUG00000014048	srsf5a	100	82.258	ENSSMAG00000010899	srsf5a	83	87.747	Scophthalmus_maximus
ENSHBUG00000014048	srsf5a	91	87.778	ENSSDUG00000006103	srsf5a	80	90.756	Seriola_dumerili
ENSHBUG00000014048	srsf5a	100	87.919	ENSSLDG00000004146	srsf5a	79	91.176	Seriola_lalandi_dorsalis
ENSHBUG00000014048	srsf5a	64	72.775	ENSSPUG00000002052	-	68	71.728	Sphenodon_punctatus
ENSHBUG00000014048	srsf5a	80	91.139	ENSSPAG00000002821	srsf5a	80	91.176	Stegastes_partitus
ENSHBUG00000014048	srsf5a	64	74.211	ENSTGUG00000011492	-	68	71.579	Taeniopygia_guttata
ENSHBUG00000014048	srsf5a	100	90.909	ENSTRUG00000022908	srsf5a	81	92.500	Takifugu_rubripes
ENSHBUG00000014048	srsf5a	99	62.081	ENSXETG00000017937	srsf5a	72	79.058	Xenopus_tropicalis
ENSHBUG00000014048	srsf5a	82	82.869	ENSXCOG00000015338	srsf5a	78	83.265	Xiphophorus_couchianus
ENSHBUG00000014048	srsf5a	82	83.137	ENSXMAG00000012823	srsf5a	61	88.601	Xiphophorus_maculatus