EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000014235 (Gene tree)
Gene ID: 102300298
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 30090 bases
Position: chrJH426052.1:48909-78998
Accession: 102300298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000012516	MMR_HSR1	PF01926.23	9.2e-05	1	1
ENSHBUP00000029668	MMR_HSR1	PF01926.23	9.2e-05	1	1
ENSHBUP00000029679	MMR_HSR1	PF01926.23	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000019954	-	7139	-	ENSHBUP00000029668	747 (aa)	-	-
ENSHBUT00000019980	-	6945	-	ENSHBUP00000029679	747 (aa)	-	-
ENSHBUT00000032595	-	6829	XM_005949695	ENSHBUP00000029666	757 (aa)	XP_005949757	-
ENSHBUT00000019973	-	6900	XM_005949698	ENSHBUP00000012516	747 (aa)	XP_005949760	-

Gene Model

Click here to download ENSHBUG00000014235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000014235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000014235	rabl6b	100	84.225	ENSACIG00000010721	rabl6b	100	84.358	Amphilophus_citrinellus
ENSHBUG00000014235	rabl6b	100	84.933	ENSATEG00000012055	rabl6b	100	84.133	Anabas_testudineus
ENSHBUG00000014235	rabl6b	100	78.244	ENSCSEG00000016135	rabl6b	100	77.588	Cynoglossus_semilaevis
ENSHBUG00000014235	rabl6b	100	71.485	ENSCSEG00000012430	-	95	77.991	Cynoglossus_semilaevis
ENSHBUG00000014235	rabl6b	100	67.098	ENSELUG00000004448	rabl6b	100	66.321	Esox_lucius
ENSHBUG00000014235	rabl6b	100	78.209	ENSGAFG00000013561	rabl6b	100	77.540	Gambusia_affinis
ENSHBUG00000014235	rabl6b	100	80.400	ENSGACG00000005242	rabl6b	100	81.467	Gasterosteus_aculeatus
ENSHBUG00000014235	rabl6b	100	79.467	ENSMAMG00000019516	rabl6b	100	81.333	Mastacembelus_armatus
ENSHBUG00000014235	rabl6b	63	88.186	ENSMZEG00005003942	rabl6b	99	88.186	Maylandia_zebra
ENSHBUG00000014235	rabl6b	63	73.305	ENSMMOG00000009459	rabl6b	97	68.987	Mola_mola
ENSHBUG00000014235	rabl6b	100	85.467	ENSMALG00000002029	rabl6b	100	85.333	Monopterus_albus
ENSHBUG00000014235	rabl6b	63	86.737	ENSNBRG00000012512	rabl6b	99	86.526	Neolamprologus_brichardi
ENSHBUG00000014235	rabl6b	100	94.645	ENSONIG00000010408	rabl6b	100	94.645	Oreochromis_niloticus
ENSHBUG00000014235	rabl6b	100	78.429	ENSORLG00020017557	rabl6b	100	77.896	Oryzias_latipes_hni
ENSHBUG00000014235	rabl6b	89	79.080	ENSORLG00015007848	rabl6b	92	79.583	Oryzias_latipes_hsok
ENSHBUG00000014235	rabl6b	89	81.627	ENSOMEG00000022840	rabl6b	96	80.873	Oryzias_melastigma
ENSHBUG00000014235	rabl6b	90	60.948	ENSPCIG00000023722	RABL6	91	59.181	Phascolarctos_cinereus
ENSHBUG00000014235	rabl6b	100	82.933	ENSPFOG00000003250	rabl6b	100	82.267	Poecilia_formosa
ENSHBUG00000014235	rabl6b	100	82.933	ENSPLAG00000019562	rabl6b	100	82.267	Poecilia_latipinna
ENSHBUG00000014235	rabl6b	100	84.667	ENSPMEG00000020472	rabl6b	100	83.733	Poecilia_mexicana
ENSHBUG00000014235	rabl6b	90	85.185	ENSPREG00000014116	rabl6b	94	84.835	Poecilia_reticulata
ENSHBUG00000014235	rabl6b	90	65.084	ENSPNAG00000010857	rabl6b	92	65.335	Pygocentrus_nattereri
ENSHBUG00000014235	rabl6b	99	63.373	ENSSFOG00015013414	-	99	62.367	Scleropages_formosus
ENSHBUG00000014235	rabl6b	88	86.233	ENSSMAG00000012543	rabl6b	96	85.886	Scophthalmus_maximus
ENSHBUG00000014235	rabl6b	100	88.133	ENSSDUG00000006564	rabl6b	100	87.867	Seriola_dumerili
ENSHBUG00000014235	rabl6b	100	85.027	ENSSPAG00000021033	rabl6b	95	89.039	Stegastes_partitus
ENSHBUG00000014235	rabl6b	99	74.605	ENSTNIG00000010595	rabl6b	100	73.413	Tetraodon_nigroviridis