EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHBUG00000014338 (Gene tree)
Gene ID: 102292099
Gene Symbol: RAB41
Alias: -
Full Name: RAB41%2C member RAS oncogene family
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 8578 bases
Position: chrJH425325.1:2665270-2673847
Accession: 102292099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000012605	MMR_HSR1	PF01926.23	7.5e-05	1	1
ENSHBUP00000012564	MMR_HSR1	PF01926.23	7.7e-05	1	1
ENSHBUP00000029705	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000020047	RAB41-201	2788	XM_005913238	ENSHBUP00000029705	211 (aa)	XP_005913300	UPI0000E3E362
ENSHBUT00000020081	RAB41-202	2788	XM_005913240	ENSHBUP00000012605	211 (aa)	XP_005913302	UPI0003942480
ENSHBUT00000032591	RAB41-203	2788	XM_005913239	ENSHBUP00000012564	211 (aa)	XP_005913301	UPI0000E3E361

Gene Model

Click here to download ENSHBUG00000014338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000014338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHBUG00000014338	RAB41	74	37.580	ENSHBUG00000009947	-	72	37.580
ENSHBUG00000014338	RAB41	74	38.217	ENSHBUG00000014777	rab11bb	72	38.217
ENSHBUG00000014338	RAB41	74	33.544	ENSHBUG00000011998	hrasb	83	33.544
ENSHBUG00000014338	RAB41	82	43.023	ENSHBUG00000006823	-	92	37.561
ENSHBUG00000014338	RAB41	84	43.503	ENSHBUG00000003752	rab5aa	82	43.503
ENSHBUG00000014338	RAB41	75	41.139	ENSHBUG00000006056	-	73	41.139
ENSHBUG00000014338	RAB41	76	36.646	ENSHBUG00000009333	rab11al	75	36.646
ENSHBUG00000014338	RAB41	73	40.385	ENSHBUG00000008497	rab12	65	39.623
ENSHBUG00000014338	RAB41	92	38.776	ENSHBUG00000010304	rab1ab	96	38.776
ENSHBUG00000014338	RAB41	94	34.135	ENSHBUG00000003539	RAB39B	98	34.135
ENSHBUG00000014338	RAB41	90	31.841	ENSHBUG00000023035	rab11a	87	31.841
ENSHBUG00000014338	RAB41	94	34.615	ENSHBUG00000013570	-	98	34.615
ENSHBUG00000014338	RAB41	98	90.338	ENSHBUG00000000890	rab6a	99	90.338
ENSHBUG00000014338	RAB41	92	32.500	ENSHBUG00000013010	rab32b	92	32.500
ENSHBUG00000014338	RAB41	73	33.974	ENSHBUG00000018763	rras	79	33.974
ENSHBUG00000014338	RAB41	73	40.260	ENSHBUG00000019261	si:dkey-16l2.16	73	40.260
ENSHBUG00000014338	RAB41	76	43.478	ENSHBUG00000000993	rab30	74	43.478
ENSHBUG00000014338	RAB41	75	35.976	ENSHBUG00000009027	-	78	35.976
ENSHBUG00000014338	RAB41	75	40.506	ENSHBUG00000022562	-	73	40.506
ENSHBUG00000014338	RAB41	84	36.216	ENSHBUG00000002397	-	87	36.216
ENSHBUG00000014338	RAB41	82	42.529	ENSHBUG00000002014	rab5c	74	44.172
ENSHBUG00000014338	RAB41	66	40.000	ENSHBUG00000007966	rab23	74	40.132
ENSHBUG00000014338	RAB41	60	37.500	ENSHBUG00000015310	RAP2B	96	37.500
ENSHBUG00000014338	RAB41	92	36.000	ENSHBUG00000009014	-	96	36.000
ENSHBUG00000014338	RAB41	76	36.646	ENSHBUG00000003876	rab25a	77	36.646
ENSHBUG00000014338	RAB41	73	30.519	ENSHBUG00000010964	rabl2	68	30.519
ENSHBUG00000014338	RAB41	97	90.732	ENSHBUG00000012905	rab6ba	99	90.732
ENSHBUG00000014338	RAB41	70	39.610	ENSHBUG00000001714	-	63	39.869
ENSHBUG00000014338	RAB41	92	34.872	ENSHBUG00000009320	rab25b	97	34.197
ENSHBUG00000014338	RAB41	83	35.829	ENSHBUG00000001595	rab9b	82	35.829
ENSHBUG00000014338	RAB41	79	40.936	ENSHBUG00000003696	rab18b	83	40.936
ENSHBUG00000014338	RAB41	73	38.961	ENSHBUG00000001416	rab35b	76	38.961
ENSHBUG00000014338	RAB41	91	34.314	ENSHBUG00000022669	rab9a	97	34.314
ENSHBUG00000014338	RAB41	59	30.159	ENSHBUG00000005802	arl4d	62	30.159
ENSHBUG00000014338	RAB41	98	80.193	ENSHBUG00000003230	rab6bb	99	80.193
ENSHBUG00000014338	RAB41	75	44.937	ENSHBUG00000003728	-	79	44.937
ENSHBUG00000014338	RAB41	70	42.953	ENSHBUG00000013162	rab33ba	72	42.953
ENSHBUG00000014338	RAB41	75	31.098	ENSHBUG00000011397	si:cabz01085950.1	80	31.098
ENSHBUG00000014338	RAB41	77	42.262	ENSHBUG00000007827	zgc:101559	72	42.262
ENSHBUG00000014338	RAB41	90	39.153	ENSHBUG00000017297	rab15	86	39.153
ENSHBUG00000014338	RAB41	80	39.881	ENSHBUG00000003434	rab22a	69	39.881
ENSHBUG00000014338	RAB41	83	30.508	ENSHBUG00000017973	si:ch73-116o1.2	84	30.337
ENSHBUG00000014338	RAB41	92	35.238	ENSHBUG00000017620	-	96	35.238
ENSHBUG00000014338	RAB41	57	31.618	ENSHBUG00000018481	-	78	31.618
ENSHBUG00000014338	RAB41	74	32.911	ENSHBUG00000013197	kras	83	32.911
ENSHBUG00000014338	RAB41	92	35.000	ENSHBUG00000014023	si:dkey-13a21.4	95	35.000
ENSHBUG00000014338	RAB41	92	36.000	ENSHBUG00000010852	RAB7A	96	36.000
ENSHBUG00000014338	RAB41	81	34.884	ENSHBUG00000007788	rheb	93	34.884
ENSHBUG00000014338	RAB41	79	32.948	ENSHBUG00000012594	RAB29	83	32.948
ENSHBUG00000014338	RAB41	73	39.490	ENSHBUG00000015126	rab42a	59	39.490
ENSHBUG00000014338	RAB41	92	35.354	ENSHBUG00000001462	RAB17	87	35.354
ENSHBUG00000014338	RAB41	79	39.181	ENSHBUG00000001518	rab18a	83	39.181
ENSHBUG00000014338	RAB41	81	34.682	ENSHBUG00000016064	rab34a	69	34.682
ENSHBUG00000014338	RAB41	92	38.191	ENSHBUG00000019164	rab2a	91	38.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000014338	RAB41	100	100.000	ENSACIG00000010914	RAB41	100	100.000	Amphilophus_citrinellus
ENSHBUG00000014338	RAB41	100	100.000	ENSAOCG00000022426	RAB41	100	100.000	Amphiprion_ocellaris
ENSHBUG00000014338	RAB41	100	100.000	ENSAPEG00000007931	RAB41	100	100.000	Amphiprion_percula
ENSHBUG00000014338	RAB41	94	70.707	ENSTSYG00000000768	RAB41	87	70.707	Carlito_syrichta
ENSHBUG00000014338	RAB41	93	67.005	ENSCATG00000037380	RAB41	87	67.005	Cercocebus_atys
ENSHBUG00000014338	RAB41	100	96.209	ENSCPBG00000014340	RAB41	100	96.209	Chrysemys_picta_bellii
ENSHBUG00000014338	RAB41	100	100.000	ENSFHEG00000015996	RAB41	100	100.000	Fundulus_heteroclitus
ENSHBUG00000014338	RAB41	100	100.000	ENSLBEG00000008746	RAB41	100	100.000	Labrus_bergylta
ENSHBUG00000014338	RAB41	93	68.528	ENSMFAG00000000762	RAB41	87	68.528	Macaca_fascicularis
ENSHBUG00000014338	RAB41	93	68.528	ENSMMUG00000013937	RAB41	87	68.528	Macaca_mulatta
ENSHBUG00000014338	RAB41	93	68.020	ENSMNEG00000045569	RAB41	87	68.020	Macaca_nemestrina
ENSHBUG00000014338	RAB41	91	67.358	ENSMLEG00000038149	RAB41	86	67.358	Mandrillus_leucophaeus
ENSHBUG00000014338	RAB41	100	99.528	ENSONIG00000002774	RAB41	100	99.528	Oreochromis_niloticus
ENSHBUG00000014338	RAB41	100	99.052	ENSORLG00000027669	RAB41	100	99.052	Oryzias_latipes
ENSHBUG00000014338	RAB41	100	99.052	ENSORLG00015010161	RAB41	100	99.052	Oryzias_latipes_hsok
ENSHBUG00000014338	RAB41	100	99.052	ENSOMEG00000017258	RAB41	100	99.052	Oryzias_melastigma
ENSHBUG00000014338	RAB41	93	68.020	ENSPANG00000007317	RAB41	87	68.020	Papio_anubis
ENSHBUG00000014338	RAB41	99	96.651	ENSPKIG00000014618	-	99	96.651	Paramormyrops_kingsleyae
ENSHBUG00000014338	RAB41	100	100.000	ENSPMGG00000017830	RAB41	100	100.000	Periophthalmus_magnuspinnatus
ENSHBUG00000014338	RAB41	100	100.000	ENSPFOG00000011424	RAB41	100	100.000	Poecilia_formosa
ENSHBUG00000014338	RAB41	100	100.000	ENSPREG00000009535	RAB41	100	100.000	Poecilia_reticulata
ENSHBUG00000014338	RAB41	93	68.528	ENSRBIG00000027991	RAB41	87	68.528	Rhinopithecus_bieti
ENSHBUG00000014338	RAB41	99	98.565	ENSSFOG00015011268	RAB41	99	98.565	Scleropages_formosus
ENSHBUG00000014338	RAB41	100	98.131	ENSTNIG00000016831	RAB41	100	98.131	Tetraodon_nigroviridis
ENSHBUG00000014338	RAB41	99	96.172	ENSXETG00000030938	rab41	99	96.172	Xenopus_tropicalis
ENSHBUG00000014338	RAB41	100	100.000	ENSXCOG00000015802	RAB41	100	100.000	Xiphophorus_couchianus
ENSHBUG00000014338	RAB41	100	100.000	ENSXMAG00000027787	RAB41	100	100.000	Xiphophorus_maculatus