EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000014400 (Gene tree)
Gene ID: 102312082
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: zinc finger protein 36%2C C3H1 type-like 2
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Minus strand
Length: 3872 bases
Position: chrJH425774.1:252867-256738
Accession: 102312082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000029771	zf-CCCH	PF00642.24	1.9e-30	1	4
ENSHBUP00000029771	zf-CCCH	PF00642.24	1.9e-30	2	4
ENSHBUP00000029771	zf-CCCH	PF00642.24	1.9e-30	3	4
ENSHBUP00000029771	zf-CCCH	PF00642.24	1.9e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000020182	-	2771	XM_005945411	ENSHBUP00000029771	295 (aa)	XP_005945473	UPI0003AF6AC8

Gene Model

Click here to download ENSHBUG00000014400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000014400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000014400	cth1	89	66.176	ENSAPOG00000012552	cth1	95	66.300	Acanthochromis_polyacanthus
ENSHBUG00000014400	cth1	88	74.909	ENSACIG00000016026	cth1	99	73.885	Amphilophus_citrinellus
ENSHBUG00000014400	cth1	100	67.203	ENSAOCG00000001644	cth1	100	66.559	Amphiprion_ocellaris
ENSHBUG00000014400	cth1	100	67.203	ENSAPEG00000008930	cth1	100	66.559	Amphiprion_percula
ENSHBUG00000014400	cth1	99	63.830	ENSATEG00000002281	cth1	97	64.087	Anabas_testudineus
ENSHBUG00000014400	cth1	94	98.917	ENSACLG00000015353	cth1	100	98.917	Astatotilapia_calliptera
ENSHBUG00000014400	cth1	96	56.230	ENSAMXG00000025717	cth1	97	56.129	Astyanax_mexicanus
ENSHBUG00000014400	cth1	100	62.617	ENSCSEG00000014617	cth1	100	62.305	Cynoglossus_semilaevis
ENSHBUG00000014400	cth1	100	55.340	ENSCVAG00000001680	cth1	65	56.250	Cyprinodon_variegatus
ENSHBUG00000014400	cth1	90	58.703	ENSDARG00000057328	cth1	100	58.204	Danio_rerio
ENSHBUG00000014400	cth1	99	54.627	ENSELUG00000012738	cth1	99	53.134	Esox_lucius
ENSHBUG00000014400	cth1	100	56.013	ENSFHEG00000022665	cth1	100	55.272	Fundulus_heteroclitus
ENSHBUG00000014400	cth1	99	60.510	ENSGMOG00000007360	cth1	100	59.295	Gadus_morhua
ENSHBUG00000014400	cth1	100	55.385	ENSGAFG00000019288	cth1	100	55.625	Gambusia_affinis
ENSHBUG00000014400	cth1	99	62.623	ENSGACG00000000802	cth1	99	62.376	Gasterosteus_aculeatus
ENSHBUG00000014400	cth1	97	53.448	ENSHCOG00000010276	cth1	97	52.759	Hippocampus_comes
ENSHBUG00000014400	cth1	99	56.656	ENSIPUG00000018040	cth1	98	56.386	Ictalurus_punctatus
ENSHBUG00000014400	cth1	100	60.265	ENSKMAG00000005944	cth1	100	60.265	Kryptolebias_marmoratus
ENSHBUG00000014400	cth1	100	64.486	ENSLBEG00000019253	cth1	100	64.062	Labrus_bergylta
ENSHBUG00000014400	cth1	79	51.196	ENSLOCG00000002047	cth1	98	51.675	Lepisosteus_oculatus
ENSHBUG00000014400	cth1	80	59.671	ENSMAMG00000001525	cth1	65	59.671	Mastacembelus_armatus
ENSHBUG00000014400	cth1	100	98.305	ENSMZEG00005022335	cth1	100	98.305	Maylandia_zebra
ENSHBUG00000014400	cth1	95	65.461	ENSMMOG00000020518	cth1	100	64.356	Mola_mola
ENSHBUG00000014400	cth1	100	49.072	ENSMALG00000020738	cth1	58	66.055	Monopterus_albus
ENSHBUG00000014400	cth1	88	85.824	ENSNBRG00000022789	cth1	88	85.824	Neolamprologus_brichardi
ENSHBUG00000014400	cth1	99	88.667	ENSONIG00000021318	cth1	99	88.667	Oreochromis_niloticus
ENSHBUG00000014400	cth1	100	57.000	ENSORLG00000022847	cth1	100	57.667	Oryzias_latipes
ENSHBUG00000014400	cth1	100	57.000	ENSORLG00020011979	cth1	100	57.143	Oryzias_latipes_hni
ENSHBUG00000014400	cth1	100	57.000	ENSORLG00015013084	cth1	100	57.667	Oryzias_latipes_hsok
ENSHBUG00000014400	cth1	91	61.338	ENSOMEG00000005809	cth1	79	61.905	Oryzias_melastigma
ENSHBUG00000014400	cth1	97	51.562	ENSPKIG00000015883	cth1	95	50.938	Paramormyrops_kingsleyae
ENSHBUG00000014400	cth1	99	61.491	ENSPMGG00000004275	cth1	100	60.248	Periophthalmus_magnuspinnatus
ENSHBUG00000014400	cth1	100	55.521	ENSPFOG00000013583	cth1	94	57.325	Poecilia_formosa
ENSHBUG00000014400	cth1	100	55.836	ENSPLAG00000018158	cth1	94	57.643	Poecilia_latipinna
ENSHBUG00000014400	cth1	100	55.660	ENSPMEG00000005744	cth1	100	57.460	Poecilia_mexicana
ENSHBUG00000014400	cth1	99	56.494	ENSPREG00000004099	cth1	100	57.742	Poecilia_reticulata
ENSHBUG00000014400	cth1	91	89.179	ENSPNYG00000016705	cth1	93	89.179	Pundamilia_nyererei
ENSHBUG00000014400	cth1	100	54.985	ENSPNAG00000013147	cth1	99	54.407	Pygocentrus_nattereri
ENSHBUG00000014400	cth1	86	54.874	ENSSFOG00015017190	cth1	87	54.545	Scleropages_formosus
ENSHBUG00000014400	cth1	100	60.748	ENSSMAG00000007977	cth1	100	64.486	Scophthalmus_maximus
ENSHBUG00000014400	cth1	100	63.142	ENSSDUG00000004321	cth1	100	62.805	Seriola_dumerili
ENSHBUG00000014400	cth1	99	63.636	ENSSLDG00000010023	-	99	64.526	Seriola_lalandi_dorsalis
ENSHBUG00000014400	cth1	100	63.253	ENSSLDG00000004516	-	100	64.134	Seriola_lalandi_dorsalis
ENSHBUG00000014400	cth1	100	63.554	ENSSLDG00000012760	cth1	100	64.438	Seriola_lalandi_dorsalis
ENSHBUG00000014400	cth1	100	64.444	ENSSPAG00000018659	cth1	100	63.492	Stegastes_partitus
ENSHBUG00000014400	cth1	100	58.438	ENSTRUG00000012770	cth1	100	60.625	Takifugu_rubripes
ENSHBUG00000014400	cth1	100	59.688	ENSTNIG00000000740	cth1	100	58.750	Tetraodon_nigroviridis
ENSHBUG00000014400	cth1	82	58.848	ENSXCOG00000003710	cth1	82	56.769	Xiphophorus_couchianus
ENSHBUG00000014400	cth1	100	55.911	ENSXMAG00000023885	cth1	100	55.591	Xiphophorus_maculatus