EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHBUG00000014616 (Gene tree)
Gene ID: 106632392
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Haplochromis_burtoni
Status: putative
Strand: Plus strand
Length: 10944 bases
Position: chrJH425322.1:6711369-6722312
Accession: 106632392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHBUP00000012891	MA3	PF02847.17	8.6e-22	1	1
ENSHBUP00000012888	MA3	PF02847.17	1e-21	1	1
ENSHBUP00000012891	MIF4G	PF02854.19	7.1e-20	1	1
ENSHBUP00000012888	MIF4G	PF02854.19	8.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHBUT00000020442	-	3446	XM_014329656	ENSHBUP00000012888	832 (aa)	XP_014185142	UPI0006C94CE8
ENSHBUT00000020449	-	3819	-	ENSHBUP00000012891	774 (aa)	-	-

Gene Model

Click here to download ENSHBUG00000014616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHBUG00000014616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHBUG00000014616	nom1	98	53.232	ENSG00000146909	NOM1	83	58.783	Homo_sapiens
ENSHBUG00000014616	nom1	64	90.075	ENSAPOG00000012073	nom1	100	75.838	Acanthochromis_polyacanthus
ENSHBUG00000014616	nom1	81	58.576	ENSAMEG00000001412	NOM1	99	55.088	Ailuropoda_melanoleuca
ENSHBUG00000014616	nom1	89	94.421	ENSACIG00000018050	nom1	67	93.321	Amphilophus_citrinellus
ENSHBUG00000014616	nom1	64	89.700	ENSAOCG00000006229	nom1	100	76.279	Amphiprion_ocellaris
ENSHBUG00000014616	nom1	64	89.700	ENSAPEG00000015994	nom1	100	77.241	Amphiprion_percula
ENSHBUG00000014616	nom1	98	76.306	ENSATEG00000005405	nom1	100	76.703	Anabas_testudineus
ENSHBUG00000014616	nom1	79	59.484	ENSAPLG00000006585	NOM1	80	66.288	Anas_platyrhynchos
ENSHBUG00000014616	nom1	79	56.710	ENSACAG00000011192	NOM1	63	65.428	Anolis_carolinensis
ENSHBUG00000014616	nom1	100	98.973	ENSACLG00000000033	nom1	100	98.973	Astatotilapia_calliptera
ENSHBUG00000014616	nom1	63	74.906	ENSAMXG00000041486	nom1	98	57.870	Astyanax_mexicanus
ENSHBUG00000014616	nom1	98	52.102	ENSBTAG00000016435	NOM1	62	65.160	Bos_taurus
ENSHBUG00000014616	nom1	98	52.778	ENSCJAG00000004336	NOM1	95	53.726	Callithrix_jacchus
ENSHBUG00000014616	nom1	98	51.476	ENSCAFG00020005121	NOM1	61	65.472	Canis_lupus_dingo
ENSHBUG00000014616	nom1	81	56.919	ENSCHIG00000020102	NOM1	94	52.033	Capra_hircus
ENSHBUG00000014616	nom1	97	54.167	ENSTSYG00000000227	NOM1	83	57.580	Carlito_syrichta
ENSHBUG00000014616	nom1	62	68.906	ENSCAPG00000016273	NOM1	99	68.906	Cavia_aperea
ENSHBUG00000014616	nom1	98	51.847	ENSCPOG00000025538	NOM1	96	51.737	Cavia_porcellus
ENSHBUG00000014616	nom1	88	71.196	ENSCCAG00000014944	NOM1	99	68.362	Cebus_capucinus
ENSHBUG00000014616	nom1	84	57.183	ENSCLAG00000000267	NOM1	62	65.909	Chinchilla_lanigera
ENSHBUG00000014616	nom1	74	67.228	ENSCPBG00000018215	NOM1	73	67.228	Chrysemys_picta_bellii
ENSHBUG00000014616	nom1	87	37.755	ENSCING00000005248	-	92	38.574	Ciona_intestinalis
ENSHBUG00000014616	nom1	68	62.586	ENSCANG00000041984	NOM1	89	67.433	Colobus_angolensis_palliatus
ENSHBUG00000014616	nom1	81	59.184	ENSCGRG00001020293	Nom1	80	59.768	Cricetulus_griseus_chok1gshd
ENSHBUG00000014616	nom1	62	67.437	ENSCGRG00000005405	Nom1	97	67.437	Cricetulus_griseus_crigri
ENSHBUG00000014616	nom1	98	69.463	ENSCSEG00000000932	nom1	96	68.480	Cynoglossus_semilaevis
ENSHBUG00000014616	nom1	98	72.934	ENSCVAG00000007562	nom1	98	72.242	Cyprinodon_variegatus
ENSHBUG00000014616	nom1	100	62.116	ENSDARG00000060027	nom1	100	77.207	Danio_rerio
ENSHBUG00000014616	nom1	62	57.553	ENSDORG00000015682	Nom1	99	50.570	Dipodomys_ordii
ENSHBUG00000014616	nom1	68	36.976	FBgn0035336	CG9004	60	38.252	Drosophila_melanogaster
ENSHBUG00000014616	nom1	73	58.095	ENSETEG00000003104	NOM1	81	58.152	Echinops_telfairi
ENSHBUG00000014616	nom1	52	52.847	ENSEBUG00000010077	nom1	96	52.847	Eptatretus_burgeri
ENSHBUG00000014616	nom1	81	61.111	ENSEASG00005001489	NOM1	63	67.477	Equus_asinus_asinus
ENSHBUG00000014616	nom1	66	66.243	ENSECAG00000007596	NOM1	57	67.228	Equus_caballus
ENSHBUG00000014616	nom1	99	65.805	ENSELUG00000006266	nom1	98	67.262	Esox_lucius
ENSHBUG00000014616	nom1	81	58.382	ENSFCAG00000006467	NOM1	84	57.589	Felis_catus
ENSHBUG00000014616	nom1	81	59.270	ENSFALG00000006904	NOM1	99	58.512	Ficedula_albicollis
ENSHBUG00000014616	nom1	98	53.797	ENSFDAG00000016241	NOM1	64	65.414	Fukomys_damarensis
ENSHBUG00000014616	nom1	98	74.725	ENSFHEG00000015974	nom1	98	74.142	Fundulus_heteroclitus
ENSHBUG00000014616	nom1	94	61.146	ENSGMOG00000005129	nom1	100	62.108	Gadus_morhua
ENSHBUG00000014616	nom1	86	56.403	ENSGALG00000006437	NOM1	81	54.717	Gallus_gallus
ENSHBUG00000014616	nom1	98	73.855	ENSGAFG00000003211	nom1	98	73.697	Gambusia_affinis
ENSHBUG00000014616	nom1	85	57.953	ENSGAGG00000014347	NOM1	64	68.061	Gopherus_agassizii
ENSHBUG00000014616	nom1	98	53.756	ENSGGOG00000010920	NOM1	88	54.061	Gorilla_gorilla
ENSHBUG00000014616	nom1	98	53.485	ENSHGLG00000007392	NOM1	96	52.830	Heterocephalus_glaber_female
ENSHBUG00000014616	nom1	85	70.385	ENSHGLG00100014407	NOM1	96	68.590	Heterocephalus_glaber_male
ENSHBUG00000014616	nom1	65	71.852	ENSIPUG00000013980	nom1	63	72.830	Ictalurus_punctatus
ENSHBUG00000014616	nom1	65	66.484	ENSSTOG00000031736	NOM1	93	67.797	Ictidomys_tridecemlineatus
ENSHBUG00000014616	nom1	58	69.485	ENSJJAG00000011716	Nom1	98	69.485	Jaculus_jaculus
ENSHBUG00000014616	nom1	98	72.071	ENSLBEG00000009252	nom1	100	72.023	Labrus_bergylta
ENSHBUG00000014616	nom1	83	61.354	ENSLACG00000011777	NOM1	95	57.231	Latimeria_chalumnae
ENSHBUG00000014616	nom1	98	63.216	ENSLOCG00000012452	nom1	67	74.860	Lepisosteus_oculatus
ENSHBUG00000014616	nom1	94	50.442	ENSLAFG00000007119	NOM1	65	60.487	Loxodonta_africana
ENSHBUG00000014616	nom1	98	51.008	ENSMMUG00000039033	NOM1	91	52.743	Macaca_mulatta
ENSHBUG00000014616	nom1	62	67.816	ENSMLEG00000037062	NOM1	98	67.816	Mandrillus_leucophaeus
ENSHBUG00000014616	nom1	98	74.731	ENSMAMG00000004118	nom1	98	74.699	Mastacembelus_armatus
ENSHBUG00000014616	nom1	100	98.845	ENSMZEG00005000384	nom1	100	98.805	Maylandia_zebra
ENSHBUG00000014616	nom1	83	57.709	ENSMGAG00000005051	NOM1	77	65.720	Meleagris_gallopavo
ENSHBUG00000014616	nom1	98	54.604	ENSMAUG00000017988	Nom1	62	67.823	Mesocricetus_auratus
ENSHBUG00000014616	nom1	98	52.680	ENSMICG00000017531	NOM1	95	53.056	Microcebus_murinus
ENSHBUG00000014616	nom1	98	53.915	ENSMOCG00000015962	Nom1	95	53.902	Microtus_ochrogaster
ENSHBUG00000014616	nom1	99	73.732	ENSMMOG00000004419	nom1	99	69.718	Mola_mola
ENSHBUG00000014616	nom1	99	53.268	ENSMODG00000005177	NOM1	86	59.134	Monodelphis_domestica
ENSHBUG00000014616	nom1	98	75.518	ENSMALG00000008800	nom1	98	74.903	Monopterus_albus
ENSHBUG00000014616	nom1	97	54.015	MGP_CAROLIEiJ_G0027043	Nom1	94	52.885	Mus_caroli
ENSHBUG00000014616	nom1	97	53.614	ENSMUSG00000001569	Nom1	94	52.934	Mus_musculus
ENSHBUG00000014616	nom1	97	52.190	MGP_SPRETEiJ_G0028039	Nom1	94	52.934	Mus_spretus
ENSHBUG00000014616	nom1	81	55.891	ENSMPUG00000009745	NOM1	99	55.891	Mustela_putorius_furo
ENSHBUG00000014616	nom1	71	63.000	ENSMLUG00000009129	NOM1	88	67.297	Myotis_lucifugus
ENSHBUG00000014616	nom1	100	97.611	ENSNBRG00000016429	nom1	100	97.611	Neolamprologus_brichardi
ENSHBUG00000014616	nom1	66	64.493	ENSNLEG00000000238	NOM1	83	57.341	Nomascus_leucogenys
ENSHBUG00000014616	nom1	54	71.218	ENSMEUG00000001108	NOM1	74	54.626	Notamacropus_eugenii
ENSHBUG00000014616	nom1	53	57.372	ENSOPRG00000014676	NOM1	60	61.364	Ochotona_princeps
ENSHBUG00000014616	nom1	81	59.302	ENSODEG00000009399	NOM1	76	65.537	Octodon_degus
ENSHBUG00000014616	nom1	94	96.056	ENSONIG00000005958	nom1	100	96.056	Oreochromis_niloticus
ENSHBUG00000014616	nom1	54	70.433	ENSOANG00000006139	-	97	68.251	Ornithorhynchus_anatinus
ENSHBUG00000014616	nom1	93	46.858	ENSOCUG00000021448	-	91	47.724	Oryctolagus_cuniculus
ENSHBUG00000014616	nom1	93	56.658	ENSOCUG00000004071	-	84	59.066	Oryctolagus_cuniculus
ENSHBUG00000014616	nom1	98	73.862	ENSORLG00000010541	nom1	98	74.024	Oryzias_latipes
ENSHBUG00000014616	nom1	92	74.477	ENSORLG00020010789	nom1	99	73.677	Oryzias_latipes_hni
ENSHBUG00000014616	nom1	98	73.333	ENSORLG00015010475	nom1	99	74.122	Oryzias_latipes_hsok
ENSHBUG00000014616	nom1	98	73.430	ENSOMEG00000004219	nom1	98	73.818	Oryzias_melastigma
ENSHBUG00000014616	nom1	63	66.226	ENSOGAG00000001124	NOM1	88	65.730	Otolemur_garnettii
ENSHBUG00000014616	nom1	81	57.082	ENSOARG00000007261	NOM1	97	55.210	Ovis_aries
ENSHBUG00000014616	nom1	98	52.874	ENSPPAG00000041374	NOM1	95	54.202	Pan_paniscus
ENSHBUG00000014616	nom1	81	57.266	ENSPTIG00000013532	NOM1	94	58.032	Panthera_tigris_altaica
ENSHBUG00000014616	nom1	98	52.874	ENSPTRG00000019917	NOM1	95	54.080	Pan_troglodytes
ENSHBUG00000014616	nom1	98	54.592	ENSPANG00000007605	NOM1	91	55.402	Papio_anubis
ENSHBUG00000014616	nom1	99	60.952	ENSPKIG00000005825	nom1	98	60.144	Paramormyrops_kingsleyae
ENSHBUG00000014616	nom1	64	67.978	ENSPSIG00000017848	NOM1	89	67.598	Pelodiscus_sinensis
ENSHBUG00000014616	nom1	98	72.059	ENSPMGG00000002577	nom1	100	71.154	Periophthalmus_magnuspinnatus
ENSHBUG00000014616	nom1	98	53.905	ENSPEMG00000024180	Nom1	95	53.846	Peromyscus_maniculatus_bairdii
ENSHBUG00000014616	nom1	99	52.608	ENSPCIG00000027941	NOM1	59	67.978	Phascolarctos_cinereus
ENSHBUG00000014616	nom1	100	73.852	ENSPFOG00000015771	nom1	98	74.879	Poecilia_formosa
ENSHBUG00000014616	nom1	64	85.634	ENSPLAG00000007856	nom1	98	73.544	Poecilia_latipinna
ENSHBUG00000014616	nom1	100	73.852	ENSPMEG00000014155	nom1	98	74.879	Poecilia_mexicana
ENSHBUG00000014616	nom1	98	74.089	ENSPREG00000008850	nom1	98	74.757	Poecilia_reticulata
ENSHBUG00000014616	nom1	98	50.575	ENSPPYG00000018222	NOM1	95	50.909	Pongo_abelii
ENSHBUG00000014616	nom1	80	62.326	ENSPCAG00000000440	NOM1	79	62.326	Procavia_capensis
ENSHBUG00000014616	nom1	63	66.288	ENSPCOG00000015222	NOM1	99	66.288	Propithecus_coquereli
ENSHBUG00000014616	nom1	97	51.422	ENSPVAG00000014760	NOM1	95	51.769	Pteropus_vampyrus
ENSHBUG00000014616	nom1	100	98.460	ENSPNYG00000006975	nom1	100	98.327	Pundamilia_nyererei
ENSHBUG00000014616	nom1	97	51.582	ENSRNOG00000048969	AABR07059041.1	64	63.006	Rattus_norvegicus
ENSHBUG00000014616	nom1	98	53.594	ENSRBIG00000037042	NOM1	91	55.276	Rhinopithecus_bieti
ENSHBUG00000014616	nom1	98	53.342	ENSRROG00000037293	NOM1	91	55.000	Rhinopithecus_roxellana
ENSHBUG00000014616	nom1	53	63.438	ENSSHAG00000002835	-	99	63.438	Sarcophilus_harrisii
ENSHBUG00000014616	nom1	64	69.101	ENSSHAG00000017998	-	99	60.714	Sarcophilus_harrisii
ENSHBUG00000014616	nom1	58	72.840	ENSSFOG00015003196	nom1	100	72.840	Scleropages_formosus
ENSHBUG00000014616	nom1	100	75.797	ENSSMAG00000011047	nom1	98	76.840	Scophthalmus_maximus
ENSHBUG00000014616	nom1	98	77.764	ENSSDUG00000006834	nom1	100	76.842	Seriola_dumerili
ENSHBUG00000014616	nom1	98	75.714	ENSSLDG00000021812	nom1	100	75.503	Seriola_lalandi_dorsalis
ENSHBUG00000014616	nom1	85	49.591	ENSSPUG00000002556	NOM1	100	54.938	Sphenodon_punctatus
ENSHBUG00000014616	nom1	98	78.749	ENSSPAG00000000953	nom1	100	77.404	Stegastes_partitus
ENSHBUG00000014616	nom1	81	58.032	ENSTGUG00000000702	-	99	57.465	Taeniopygia_guttata
ENSHBUG00000014616	nom1	98	71.011	ENSTRUG00000010239	nom1	98	71.567	Takifugu_rubripes
ENSHBUG00000014616	nom1	98	69.866	ENSTNIG00000012783	nom1	100	69.785	Tetraodon_nigroviridis
ENSHBUG00000014616	nom1	95	54.222	ENSTTRG00000009691	NOM1	93	53.545	Tursiops_truncatus
ENSHBUG00000014616	nom1	81	56.757	ENSUAMG00000025450	NOM1	95	51.700	Ursus_americanus
ENSHBUG00000014616	nom1	81	58.721	ENSUMAG00000014275	NOM1	96	55.342	Ursus_maritimus
ENSHBUG00000014616	nom1	78	67.580	ENSVVUG00000002608	NOM1	62	65.543	Vulpes_vulpes
ENSHBUG00000014616	nom1	89	54.889	ENSXETG00000021611	nom1	82	71.707	Xenopus_tropicalis
ENSHBUG00000014616	nom1	98	74.096	ENSXMAG00000002451	nom1	98	73.939	Xiphophorus_maculatus